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The map label for this gene is bkdR [H]

Identifier: 186477613

GI number: 186477613

Start: 3216076

End: 3216591

Strand: Reverse

Name: bkdR [H]

Synonym: Bphy_2865

Alternate gene names: 186477613

Gene position: 3216591-3216076 (Counterclockwise)

Preceding gene: 186477615

Following gene: 186477604

Centisome position: 92.45

GC content: 63.95

Gene sequence:

>516_bases
ATGGCTGAAATAGAGATAGATGCAATCGACCGGCGCATTCTCGCGATCCTTCAGGAGAATGGGCGGCTGTCGAATCAGGA
GATCGCGGAGCGGGTGAACCTGTCGCCGAGTCCGTGTCTGCGTCGGATCCGCCGGCTGGAGGAAATCGGCGTGATCCGCG
GTTACGTCGCGCTGCTGGATTCGCAGATGCTCGGGCTCGACCTGCTCGCGTACGTGAATGTGCGCCTCGAGAAGCGCGGC
GGCCCCGCGCTCAGTGCACGCGCGGACGGCACGCCGGGGCGCGCGGGCGCGACGCACTCGGAATTGTTCCGTGTGGCCGT
GCAGGGCTGGCCCGAGGTGGTCGCTTGCTATGCGATGACGGGCGATATGGACTATCTGCTGCGCGTGCAGGTGCGTGACA
TGGCGCATTTCTCGCGCTTCGTGCAGGACCACTTGCTGCGGCATCCTTCCGTGATCGACGTGAAGTCGAGCTTTTCGCTG
GAGAAGTTCAAGGAGACGACCGCGTTGCCGCTGTGA

Upstream 100 bases:

>100_bases
AGTGTAGTTGCCGGTTCGGGAAGAAAACTTGCGAATTTTCTCGCGTCGCACTAGCCTTCAGCTATTTTCTTGCGCACAGT
GGGGCTCTCAGTGGCAGAAC

Downstream 100 bases:

>100_bases
GTCGAGCGTGCAGCGCTTCGTCAGGCGTGCGGGCAAACAAAAAGGGCGGCTCCTTGAAGAGCCGCCCTTTTTGGTGTTTG
TCGTTTTGCCGCCGCTTATG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MAEIEIDAIDRRILAILQENGRLSNQEIAERVNLSPSPCLRRIRRLEEIGVIRGYVALLDSQMLGLDLLAYVNVRLEKRG
GPALSARADGTPGRAGATHSELFRVAVQGWPEVVACYAMTGDMDYLLRVQVRDMAHFSRFVQDHLLRHPSVIDVKSSFSL
EKFKETTALPL

Sequences:

>Translated_171_residues
MAEIEIDAIDRRILAILQENGRLSNQEIAERVNLSPSPCLRRIRRLEEIGVIRGYVALLDSQMLGLDLLAYVNVRLEKRG
GPALSARADGTPGRAGATHSELFRVAVQGWPEVVACYAMTGDMDYLLRVQVRDMAHFSRFVQDHLLRHPSVIDVKSSFSL
EKFKETTALPL
>Mature_170_residues
AEIEIDAIDRRILAILQENGRLSNQEIAERVNLSPSPCLRRIRRLEEIGVIRGYVALLDSQMLGLDLLAYVNVRLEKRGG
PALSARADGTPGRAGATHSELFRVAVQGWPEVVACYAMTGDMDYLLRVQVRDMAHFSRFVQDHLLRHPSVIDVKSSFSLE
KFKETTALPL

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=165, Percent_Identity=40, Blast_Score=122, Evalue=9e-30,
Organism=Escherichia coli, GI87081742, Length=166, Percent_Identity=37.9518072289157, Blast_Score=118, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 19170; Mature: 19039

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIEIDAIDRRILAILQENGRLSNQEIAERVNLSPSPCLRRIRRLEEIGVIRGYVALLD
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SQMLGLDLLAYVNVRLEKRGGPALSARADGTPGRAGATHSELFRVAVQGWPEVVACYAMT
HHHHHHHHHHHHHHEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHC
GDMDYLLRVQVRDMAHFSRFVQDHLLRHPSVIDVKSSFSLEKFKETTALPL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
AEIEIDAIDRRILAILQENGRLSNQEIAERVNLSPSPCLRRIRRLEEIGVIRGYVALLD
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SQMLGLDLLAYVNVRLEKRGGPALSARADGTPGRAGATHSELFRVAVQGWPEVVACYAMT
HHHHHHHHHHHHHHEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHC
GDMDYLLRVQVRDMAHFSRFVQDHLLRHPSVIDVKSSFSLEKFKETTALPL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]