Click here to switch to the map view.

The map label for this gene is paaD [H]

Identifier: 186477608

GI number: 186477608

Start: 3211751

End: 3212326

Strand: Direct

Name: paaD [H]

Synonym: Bphy_2860

Alternate gene names: 186477608

Gene position: 3211751-3212326 (Clockwise)

Preceding gene: 186477607

Following gene: 186477609

Centisome position: 92.31

GC content: 66.15

Gene sequence:

>576_bases
ATGACTTCGACGATGACTTCGACCGCTCAAACGGCAGCGGCAGCAACGGACCAGGCGCTCGCACAGGCGTGGGCCGTGCT
CGAGGCCGTGCCCGATCCCGAAATCCCCGTCGTGTCGATCCGCGAACTGGGCATTCTGCGCGACGTGCGCCGCGCCGCCG
ATGGCGCGCTCGAAGTCGTCATCACGCCGACCTACTCGGGCTGCCCGGCGATGTCGCAGATTGCCGAAGACATCGGCATG
GCGCTCGACGCGGCCGGTTTCGCGCCGTATCGCGTCGAAACCGTGCTCGCCCCTGCCTGGACGACCGACTGGATTACCGA
CGACGCCCGCGAAAAGCTGCGCGCATACGGCATTGCGCCGCCGACGGGCAACTGCGGCAGCAGCGAGCCCGATGCGAACA
CGGGGACGAAACAGAAAGTGATCCGCTTCGTCCCGCGCTCGCTGCCGGCACCCGCCTGCCCGCGTTGCGGCTCCAAACAC
ACCGAACGCCTCGCGCAATTCGGCTCGACGGCATGCAAAGCGCTGTATCGCTGTATCGACTGCCGTGAACCCTTCGACTA
CTTCAAACCGTACTGA

Upstream 100 bases:

>100_bases
TCGGAGCACATGGGCTTCCTGCTCGCCGAGATGCAGAGCCTCGCGCGCCAGCATCCGGGCGCAAGCTGGTAATCCGTCGA
TCCAACAGGTGAGTTCAACG

Downstream 100 bases:

>100_bases
TATGGCCACCCCGCAATTTCATCCGCTGCGCATCCGGGAAGTGCGGCCGGAAACCGCCGATGCGGTCTCCGTCGCCTTCG
AAGTCCCCGTCGAACTGCGC

Product: phenylacetate-CoA oxygenase subunit PaaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MTSTMTSTAQTAAAATDQALAQAWAVLEAVPDPEIPVVSIRELGILRDVRRAADGALEVVITPTYSGCPAMSQIAEDIGM
ALDAAGFAPYRVETVLAPAWTTDWITDDAREKLRAYGIAPPTGNCGSSEPDANTGTKQKVIRFVPRSLPAPACPRCGSKH
TERLAQFGSTACKALYRCIDCREPFDYFKPY

Sequences:

>Translated_191_residues
MTSTMTSTAQTAAAATDQALAQAWAVLEAVPDPEIPVVSIRELGILRDVRRAADGALEVVITPTYSGCPAMSQIAEDIGM
ALDAAGFAPYRVETVLAPAWTTDWITDDAREKLRAYGIAPPTGNCGSSEPDANTGTKQKVIRFVPRSLPAPACPRCGSKH
TERLAQFGSTACKALYRCIDCREPFDYFKPY
>Mature_190_residues
TSTMTSTAQTAAAATDQALAQAWAVLEAVPDPEIPVVSIRELGILRDVRRAADGALEVVITPTYSGCPAMSQIAEDIGMA
LDAAGFAPYRVETVLAPAWTTDWITDDAREKLRAYGIAPPTGNCGSSEPDANTGTKQKVIRFVPRSLPAPACPRCGSKHT
ERLAQFGSTACKALYRCIDCREPFDYFKPY

Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]

COG id: COG2151

COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510939, Length=181, Percent_Identity=46.9613259668508, Blast_Score=165, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002744
- InterPro:   IPR011883 [H]

Pfam domain/function: PF01883 DUF59 [H]

EC number: NA

Molecular weight: Translated: 20514; Mature: 20383

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTMTSTAQTAAAATDQALAQAWAVLEAVPDPEIPVVSIRELGILRDVRRAADGALEVV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
ITPTYSGCPAMSQIAEDIGMALDAAGFAPYRVETVLAPAWTTDWITDDAREKLRAYGIAP
EECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHEECCCCCCHHCCHHHHHHHHHHCCCC
PTGNCGSSEPDANTGTKQKVIRFVPRSLPAPACPRCGSKHTERLAQFGSTACKALYRCID
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
CREPFDYFKPY
CCCCHHHCCCC
>Mature Secondary Structure 
TSTMTSTAQTAAAATDQALAQAWAVLEAVPDPEIPVVSIRELGILRDVRRAADGALEVV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
ITPTYSGCPAMSQIAEDIGMALDAAGFAPYRVETVLAPAWTTDWITDDAREKLRAYGIAP
EECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHEECCCCCCHHCCHHHHHHHHHHCCCC
PTGNCGSSEPDANTGTKQKVIRFVPRSLPAPACPRCGSKHTERLAQFGSTACKALYRCID
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
CREPFDYFKPY
CCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9748275; 9278503; 10766858 [H]