| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is paaA [H]
Identifier: 186477605
GI number: 186477605
Start: 3209587
End: 3210585
Strand: Direct
Name: paaA [H]
Synonym: Bphy_2857
Alternate gene names: 186477605
Gene position: 3209587-3210585 (Clockwise)
Preceding gene: 186477557
Following gene: 186477606
Centisome position: 92.25
GC content: 63.86
Gene sequence:
>999_bases ATGTACACGCAATCCCTCGACATTCCCGGCAATGTGGCGCCGCTCGACGCGGCTGCCAGCTCGCCCGAGCAGGCCCGTTT CGACGAAGTCATGGCCGCCGACGGCAAGATCGAACCGCAAGACTGGATGCCCGACGCCTACCGCAAGACGCTGATCCGCC AGATTTCACAGCACGCGCATTCGGAAATCGTCGGCATGCTGCCGGAAGGCAACTGGATCACGCGCGCGCCGAGCCTGAAG CGCAAGGCGATCCTGCTCGCGAAGGTACAGGACGAAGGCGGTCACGGCCTCTATCTATATAGCGCGGCCGAAACGCTCGG CGTGTCGCGCGACCAGATGATCGACGCGCTGCACGCGGGCAAGGCGAAGTACTCGAGCATCTTCAATTACCCGACGCCGA CCTGGGCGGACGTCGGCGTGATCGGCTGGCTGGTCGACGGCGCGGCCATCATGAACCAGATTCCGCTGTGCCGCTGCACG TACGGTCCGTATGCCCGCGCGATGATCCGCATCTGCAAGGAAGAGTCGTTTCATCAGCGTCAGGGCTTCGACGCGCTGAT CGCGATGATGAAGGGCACCGATGCCCAGCGCGAACTGGTCCAGCAGGCAGTCAACCGCTGGTGGTATCCGGTGCTGATGA TGTTTGGCCCGAGCGACAAGGATTCCGTCCACAGTAATCAGTCGGCGAAGTGGGGCATCAAGCGCATCACGAACGACGAT CTCCGTCAGAAATTTGTCGACGCAACCGTCGAGCAGGCGAAGGTGCTGGGCGTCACGCTGCCCGACGTCAATCTGAAGTG GAACGAAGACCGCGGCCACTACGACTACAGCGACCTCGACTGGGACGAATTCTGGCGCGTGGTCAACGGTGACGGCCCGT GCAACAAGGAGCGCCTCGCGACGCGCGTCAAGGCGCACAACGACGGCGCCTGGGTACGGGAAGCCGCCCTCGCGCACGCC GGGAAACAGCGCCAGCGCGCGCAGCAACACGCCGCCTGA
Upstream 100 bases:
>100_bases GTGCAAACCCCTATCTATCCATCTCTAAAAATTTATTAACCGACCGGACGGTTGGTTTATACTGCCGGACACACACCAAC TCGTGACGAGAGCGTTCGAC
Downstream 100 bases:
>100_bases ACGGCGCCCCGAATCGAGAAAGACTGGAAGGAGATTGAGATGAACAAGGAATGGCCGATCTGGGAAGTCTTCGTGCGGAG CAAGCAGGGACTCGACCACA
Product: phenylacetate-CoA oxygenase subunit PaaA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MYTQSLDIPGNVAPLDAAASSPEQARFDEVMAADGKIEPQDWMPDAYRKTLIRQISQHAHSEIVGMLPEGNWITRAPSLK RKAILLAKVQDEGGHGLYLYSAAETLGVSRDQMIDALHAGKAKYSSIFNYPTPTWADVGVIGWLVDGAAIMNQIPLCRCT YGPYARAMIRICKEESFHQRQGFDALIAMMKGTDAQRELVQQAVNRWWYPVLMMFGPSDKDSVHSNQSAKWGIKRITNDD LRQKFVDATVEQAKVLGVTLPDVNLKWNEDRGHYDYSDLDWDEFWRVVNGDGPCNKERLATRVKAHNDGAWVREAALAHA GKQRQRAQQHAA
Sequences:
>Translated_332_residues MYTQSLDIPGNVAPLDAAASSPEQARFDEVMAADGKIEPQDWMPDAYRKTLIRQISQHAHSEIVGMLPEGNWITRAPSLK RKAILLAKVQDEGGHGLYLYSAAETLGVSRDQMIDALHAGKAKYSSIFNYPTPTWADVGVIGWLVDGAAIMNQIPLCRCT YGPYARAMIRICKEESFHQRQGFDALIAMMKGTDAQRELVQQAVNRWWYPVLMMFGPSDKDSVHSNQSAKWGIKRITNDD LRQKFVDATVEQAKVLGVTLPDVNLKWNEDRGHYDYSDLDWDEFWRVVNGDGPCNKERLATRVKAHNDGAWVREAALAHA GKQRQRAQQHAA >Mature_332_residues MYTQSLDIPGNVAPLDAAASSPEQARFDEVMAADGKIEPQDWMPDAYRKTLIRQISQHAHSEIVGMLPEGNWITRAPSLK RKAILLAKVQDEGGHGLYLYSAAETLGVSRDQMIDALHAGKAKYSSIFNYPTPTWADVGVIGWLVDGAAIMNQIPLCRCT YGPYARAMIRICKEESFHQRQGFDALIAMMKGTDAQRELVQQAVNRWWYPVLMMFGPSDKDSVHSNQSAKWGIKRITNDD LRQKFVDATVEQAKVLGVTLPDVNLKWNEDRGHYDYSDLDWDEFWRVVNGDGPCNKERLATRVKAHNDGAWVREAALAHA GKQRQRAQQHAA
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787654, Length=304, Percent_Identity=65.1315789473684, Blast_Score=437, Evalue=1e-124,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011881 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 37323; Mature: 37323
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTQSLDIPGNVAPLDAAASSPEQARFDEVMAADGKIEPQDWMPDAYRKTLIRQISQHAH CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHH SEIVGMLPEGNWITRAPSLKRKAILLAKVQDEGGHGLYLYSAAETLGVSRDQMIDALHAG HHHEEECCCCCEEECCCCCCHHEEEEEEEECCCCCEEEEEECHHHHCCCHHHHHHHHHHC KAKYSSIFNYPTPTWADVGVIGWLVDGAAIMNQIPLCRCTYGPYARAMIRICKEESFHQR CHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHH QGFDALIAMMKGTDAQRELVQQAVNRWWYPVLMMFGPSDKDSVHSNQSAKWGIKRITNDD CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHCCCCCCHHHHHHCCCHH LRQKFVDATVEQAKVLGVTLPDVNLKWNEDRGHYDYSDLDWDEFWRVVNGDGPCNKERLA HHHHHHHHHHHHHHEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHEECCCCCCCHHHHH TRVKAHNDGAWVREAALAHAGKQRQRAQQHAA HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYTQSLDIPGNVAPLDAAASSPEQARFDEVMAADGKIEPQDWMPDAYRKTLIRQISQHAH CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHH SEIVGMLPEGNWITRAPSLKRKAILLAKVQDEGGHGLYLYSAAETLGVSRDQMIDALHAG HHHEEECCCCCEEECCCCCCHHEEEEEEEECCCCCEEEEEECHHHHCCCHHHHHHHHHHC KAKYSSIFNYPTPTWADVGVIGWLVDGAAIMNQIPLCRCTYGPYARAMIRICKEESFHQR CHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHH QGFDALIAMMKGTDAQRELVQQAVNRWWYPVLMMFGPSDKDSVHSNQSAKWGIKRITNDD CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHCCCCCCHHHHHHCCCHH LRQKFVDATVEQAKVLGVTLPDVNLKWNEDRGHYDYSDLDWDEFWRVVNGDGPCNKERLA HHHHHHHHHHHHHHEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHEECCCCCCCHHHHH TRVKAHNDGAWVREAALAHAGKQRQRAQQHAA HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]