| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477533
Identifier: 186477533
GI number: 186477533
Start: 3132847
End: 3133812
Strand: Reverse
Name: 186477533
Synonym: Bphy_2785
Alternate gene names: NA
Gene position: 3133812-3132847 (Counterclockwise)
Preceding gene: 186477534
Following gene: 186477530
Centisome position: 90.07
GC content: 65.01
Gene sequence:
>966_bases ATGACTCACACTGCGAAAGCGGACCTTTCGCGCGCCGCTTTATACGCCTTTCGCGCCTCGCCGCTTGCGCTGCAGGATCT GCACGCGTTCGCGAAGGCAGAACCCGCGTCGCGCCGCCGCTTCCTGAAAGGCACGGCGAGCGCGCTGCTGCTCTCCGGCA TGGGCAGTTCGCTGCTGACGGCGTGCGGCGGCACCAATGCCGGCGCGGATCAGGCGCCGACACCGCGCCTTGCGTCGCTG GAAAACTTTCGTGACGTGGGCGGCACGGCGGCGGGCTATCCGACCGTCGACGGCCGCGTCGTGCGGCGCAATGCGTTCTT TCGTTCCAATGCGCTGACGGAGAATGCTGCGGATGCGTCCGTGCTGGATTCGCTGGGCATTGCGGCTGTCTACGACCTGC GTACGCCCGCCGAAGTCGACCGCGCTGCCGATCTGCTGCCCGCCAACGCGCTCTATCAGAAGGTCAACGTGACAGGACAC GAAGATGTGATGGCGCCCTCGGCGGACAGCGCGGCAAGCGCGGTATCGGCGATGGAGCACGCGCAACGGCTGTACGTGAC GGATCCCGTGCAGCGCGCGGCCTTCGGATCGCTGCTCTCACAGCTTGCGAGCACACCCGGCCCGCAGCTGATTCATTCGA GCGCCGGCAAAGATCGCGCGGGTTGGGCGGCGGCACTGCTGCTGAGCATCGCGAATGTGCCGTTCGACGTCATCATGCAG GACTACCTGCTGTCGAACACCTATCTGGCCAATTGGATATCGCTGCGCGTCGAAGCGCGCCGCCAGGAAGGCGGCGATCT TGCCGCCAGCATCGAGAAGCCGTTCGCGAGCGTGCAGAGCAGTTATTTGCAGGCATCATTCGATCAGGTGCAGGCAAGCT ACGGCACGATGTCGGGTTACCTGACCAACGGACTCGGGCTGATGCAATCGACGGTCGACACGCTGCGCGATCGTCTGCTT CTCTGA
Upstream 100 bases:
>100_bases CTTAGTCCGACGGCGAGGCCATCCACGTGCACGCGCATCGCGTGCGTCTTTCGCTCCTGCGCCGCGCTTGCGCTGTGCCC GCAACCAGTAGAAACACACG
Downstream 100 bases:
>100_bases GTTCTCCCGCACCAGGAAAAAACGGCCCGTCCCAGGTGGCAGCGGGACGGACCGAACAGGGAGGCGCCGAGGACGCCGGA TTGCACTATAGATCCTGGCT
Product: protein tyrosine/serine phosphatase
Products: NA
Alternate protein names: Protein-Tyrosine Phosphatase; Protein-Tyrosine-Phosphatase; Protein Tyrosine Phosphatase; Serine/Tyrosine Protein Phosphatase; Tyrosine Phosphatase; Tyrosine-Protein Phosphatase; Tyrosine Protein Phosphatase; Tyrosine/Serine Phosphatase; Protein Tyrosine/Serine Phosphatase-Like Protein; LOW QUALITY PROTEIN Protein Tyrosine/Serine Phosphatase; Phosphotyrosine Protein Phosphatase Ptpb; Autotransporter Beta-Domain-Containing Protein; Conventional Protein Tyrosine Phosphatase; Protein-Tyrosine Phosphatase-Like Protein; Tyrosine Specific Protein Phosphatase
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTHTAKADLSRAALYAFRASPLALQDLHAFAKAEPASRRRFLKGTASALLLSGMGSSLLTACGGTNAGADQAPTPRLASL ENFRDVGGTAAGYPTVDGRVVRRNAFFRSNALTENAADASVLDSLGIAAVYDLRTPAEVDRAADLLPANALYQKVNVTGH EDVMAPSADSAASAVSAMEHAQRLYVTDPVQRAAFGSLLSQLASTPGPQLIHSSAGKDRAGWAAALLLSIANVPFDVIMQ DYLLSNTYLANWISLRVEARRQEGGDLAASIEKPFASVQSSYLQASFDQVQASYGTMSGYLTNGLGLMQSTVDTLRDRLL L
Sequences:
>Translated_321_residues MTHTAKADLSRAALYAFRASPLALQDLHAFAKAEPASRRRFLKGTASALLLSGMGSSLLTACGGTNAGADQAPTPRLASL ENFRDVGGTAAGYPTVDGRVVRRNAFFRSNALTENAADASVLDSLGIAAVYDLRTPAEVDRAADLLPANALYQKVNVTGH EDVMAPSADSAASAVSAMEHAQRLYVTDPVQRAAFGSLLSQLASTPGPQLIHSSAGKDRAGWAAALLLSIANVPFDVIMQ DYLLSNTYLANWISLRVEARRQEGGDLAASIEKPFASVQSSYLQASFDQVQASYGTMSGYLTNGLGLMQSTVDTLRDRLL L >Mature_320_residues THTAKADLSRAALYAFRASPLALQDLHAFAKAEPASRRRFLKGTASALLLSGMGSSLLTACGGTNAGADQAPTPRLASLE NFRDVGGTAAGYPTVDGRVVRRNAFFRSNALTENAADASVLDSLGIAAVYDLRTPAEVDRAADLLPANALYQKVNVTGHE DVMAPSADSAASAVSAMEHAQRLYVTDPVQRAAFGSLLSQLASTPGPQLIHSSAGKDRAGWAAALLLSIANVPFDVIMQD YLLSNTYLANWISLRVEARRQEGGDLAASIEKPFASVQSSYLQASFDQVQASYGTMSGYLTNGLGLMQSTVDTLRDRLLL
Specific function: Unknown
COG id: COG2365
COG function: function code T; Protein tyrosine/serine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33912; Mature: 33780
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHTAKADLSRAALYAFRASPLALQDLHAFAKAEPASRRRFLKGTASALLLSGMGSSLLT CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHH ACGGTNAGADQAPTPRLASLENFRDVGGTAAGYPTVDGRVVRRNAFFRSNALTENAADAS HCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCHHH VLDSLGIAAVYDLRTPAEVDRAADLLPANALYQKVNVTGHEDVMAPSADSAASAVSAMEH HHHHCCHHHEECCCCCHHHHHHHHHCCHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHH AQRLYVTDPVQRAAFGSLLSQLASTPGPQLIHSSAGKDRAGWAAALLLSIANVPFDVIMQ HHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH DYLLSNTYLANWISLRVEARRQEGGDLAASIEKPFASVQSSYLQASFDQVQASYGTMSGY HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTNGLGLMQSTVDTLRDRLLL HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure THTAKADLSRAALYAFRASPLALQDLHAFAKAEPASRRRFLKGTASALLLSGMGSSLLT CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHH ACGGTNAGADQAPTPRLASLENFRDVGGTAAGYPTVDGRVVRRNAFFRSNALTENAADAS HCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCHHH VLDSLGIAAVYDLRTPAEVDRAADLLPANALYQKVNVTGHEDVMAPSADSAASAVSAMEH HHHHCCHHHEECCCCCHHHHHHHHHCCHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHH AQRLYVTDPVQRAAFGSLLSQLASTPGPQLIHSSAGKDRAGWAAALLLSIANVPFDVIMQ HHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH DYLLSNTYLANWISLRVEARRQEGGDLAASIEKPFASVQSSYLQASFDQVQASYGTMSGY HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTNGLGLMQSTVDTLRDRLLL HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA