Click here to switch to the map view.

The map label for this gene is petB [H]

Identifier: 186477490

GI number: 186477490

Start: 3096800

End: 3098182

Strand: Reverse

Name: petB [H]

Synonym: Bphy_2742

Alternate gene names: 186477490

Gene position: 3098182-3096800 (Counterclockwise)

Preceding gene: 186477491

Following gene: 186477489

Centisome position: 89.05

GC content: 60.59

Gene sequence:

>1383_bases
ATGGCGACGACCGAAAAAGAGGTAGAAACGACGGGGTTCACGGGCTGGATCGATCGCCGCTTTCCGATGACGGCGACCTG
GAAGGCCCATGTTTCCGAGTACTACGCGCCGAAGAACTTCAACTTCTGGTACTTCTTCGGTTCGCTCGCGCTGCTGGTGC
TGGTCAACCAGATCGTCACCGGCATCTTCCTGACAATGAATTACAAGCCCGATGCGACGCTCGCGTTCGCCTCGGTCGAG
TACATCATGCGCGAGGTGCCCTGGGGCTGGCTGATCCGCTACATGCACTCTACGGGCGCGTCGATGTTCTTCGTCGTGGT
GTATCTGCACATGTTCCGGGGTCTGCTTTACGGCTCGTACCGCAAGCCGCGCGAACTGGTATGGATTTTCGGCTGCGCGA
TCTTTCTGTGCCTGATGGCTGAGGCGTTCTTCGGCTATCTGCTGCCCTGGGGACAGATGTCGTACTGGGGCGCGCAGGTG
ATCGTGAACCTGTTCTCGGCGATCCCGTTCATCGGTCCGGATCTGTCGCTGTGGATTCGCGGCGACTACGTTGTGTCCGA
CGTCACGCTGAACCGCTTCTTCGCGTTCCACGTGATCGCGATTCCGCTGGTGCTGCTGCTGCTCGTGGTCGCCCACATCG
TCGCGCTGCACGAAGTGGGCTCGAACAACCCCGACGGCATCGAGATCAAGGCGAAGAAGGACGCGAAGGGCATCCCGCTG
GACGGTATACCGTTCCATCCCTACTATTCGGTGCACGACTTCATGGGCGTGTGTGTGTTCCTGATGGTGTTCGCGGCGAT
CATCTTCTTCGCACCGGAGATGGGCGGCTACTTCCTCGAATCGAACAACTTCGTGCCTGCCAATCCGCTGCAGACGCCAC
CCGAGATCGCGCCCGTCTGGTACTTCACCGCGTTCTACGCGATGCTGCGCGCCACCACCGATCCGTTCAAGATCGTGTTG
ATGATCGTGATCGGCCTGCTCGGGCTGTTTGCACTGATCCGCGCGCGTGGCAAGTGGAAGGTCGGCCTCCCCGTGCTCGC
GGTGCTCGTGATTCTCGCGATGGCGTTCACCGAATCGAAGTTCTGGGGCGTCGTGGTGATGGGCAGCGCGGTGGTGTCGC
TGTTCTTCCTGCCGTGGCTCGACCGGTCGCCCGTCAAGTCGATTCGCTACCGGCCGTTCTTTCACAAGGTGTTTTACGCG
ATCTTCGTGCTGGCTTTCCTGACGCTGGCGTTCCTCGGCACCAAGCCGCCGTCGCCTGCGGCCACGCTGATCGCGCAGAT
CTGCGCGCTGGTCTACTTCGCGTTTTTCCTCGGCATGCCGTTCTGGACGCCGCTTGGCAAATTCAAGCAGCCGCCCGAAC
GAGTGCGGTTCAAACCTCACTAA

Upstream 100 bases:

>100_bases
TCTTCAAGAACAAACCCGCGCCGCAGAACCTCGATATCCCGCCTTACATGGTTACGGGCAACACGCTCGTGATCGGCAAG
GACGAGAAAGGAGAAGCGTA

Downstream 100 bases:

>100_bases
CCGCGAGCCAGGAGAAAACGAAGATGAAAAAACTGCTTTCGACGCTGGCGCTGCTCGGTGCAACCGTGCTGGCGCTGTCC
ACAGCGCCAGCACGCGCGGA

Product: cytochrome b/b6 domain-containing protein

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MATTEKEVETTGFTGWIDRRFPMTATWKAHVSEYYAPKNFNFWYFFGSLALLVLVNQIVTGIFLTMNYKPDATLAFASVE
YIMREVPWGWLIRYMHSTGASMFFVVVYLHMFRGLLYGSYRKPRELVWIFGCAIFLCLMAEAFFGYLLPWGQMSYWGAQV
IVNLFSAIPFIGPDLSLWIRGDYVVSDVTLNRFFAFHVIAIPLVLLLLVVAHIVALHEVGSNNPDGIEIKAKKDAKGIPL
DGIPFHPYYSVHDFMGVCVFLMVFAAIIFFAPEMGGYFLESNNFVPANPLQTPPEIAPVWYFTAFYAMLRATTDPFKIVL
MIVIGLLGLFALIRARGKWKVGLPVLAVLVILAMAFTESKFWGVVVMGSAVVSLFFLPWLDRSPVKSIRYRPFFHKVFYA
IFVLAFLTLAFLGTKPPSPAATLIAQICALVYFAFFLGMPFWTPLGKFKQPPERVRFKPH

Sequences:

>Translated_460_residues
MATTEKEVETTGFTGWIDRRFPMTATWKAHVSEYYAPKNFNFWYFFGSLALLVLVNQIVTGIFLTMNYKPDATLAFASVE
YIMREVPWGWLIRYMHSTGASMFFVVVYLHMFRGLLYGSYRKPRELVWIFGCAIFLCLMAEAFFGYLLPWGQMSYWGAQV
IVNLFSAIPFIGPDLSLWIRGDYVVSDVTLNRFFAFHVIAIPLVLLLLVVAHIVALHEVGSNNPDGIEIKAKKDAKGIPL
DGIPFHPYYSVHDFMGVCVFLMVFAAIIFFAPEMGGYFLESNNFVPANPLQTPPEIAPVWYFTAFYAMLRATTDPFKIVL
MIVIGLLGLFALIRARGKWKVGLPVLAVLVILAMAFTESKFWGVVVMGSAVVSLFFLPWLDRSPVKSIRYRPFFHKVFYA
IFVLAFLTLAFLGTKPPSPAATLIAQICALVYFAFFLGMPFWTPLGKFKQPPERVRFKPH
>Mature_459_residues
ATTEKEVETTGFTGWIDRRFPMTATWKAHVSEYYAPKNFNFWYFFGSLALLVLVNQIVTGIFLTMNYKPDATLAFASVEY
IMREVPWGWLIRYMHSTGASMFFVVVYLHMFRGLLYGSYRKPRELVWIFGCAIFLCLMAEAFFGYLLPWGQMSYWGAQVI
VNLFSAIPFIGPDLSLWIRGDYVVSDVTLNRFFAFHVIAIPLVLLLLVVAHIVALHEVGSNNPDGIEIKAKKDAKGIPLD
GIPFHPYYSVHDFMGVCVFLMVFAAIIFFAPEMGGYFLESNNFVPANPLQTPPEIAPVWYFTAFYAMLRATTDPFKIVLM
IVIGLLGLFALIRARGKWKVGLPVLAVLVILAMAFTESKFWGVVVMGSAVVSLFFLPWLDRSPVKSIRYRPFFHKVFYAI
FVLAFLTLAFLGTKPPSPAATLIAQICALVYFAFFLGMPFWTPLGKFKQPPERVRFKPH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=402, Percent_Identity=38.0597014925373, Blast_Score=254, Evalue=1e-67,
Organism=Saccharomyces cerevisiae, GI6226529, Length=410, Percent_Identity=38.2926829268293, Blast_Score=249, Evalue=5e-67,
Organism=Saccharomyces cerevisiae, GI6226532, Length=241, Percent_Identity=46.4730290456432, Blast_Score=208, Evalue=1e-54,
Organism=Saccharomyces cerevisiae, GI6226531, Length=152, Percent_Identity=52.6315789473684, Blast_Score=155, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6226530, Length=137, Percent_Identity=49.6350364963504, Blast_Score=125, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 52282; Mature: 52151

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTEKEVETTGFTGWIDRRFPMTATWKAHVSEYYAPKNFNFWYFFGSLALLVLVNQIVT
CCCCCCHHHHCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
GIFLTMNYKPDATLAFASVEYIMREVPWGWLIRYMHSTGASMFFVVVYLHMFRGLLYGSY
HHEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
RKPRELVWIFGCAIFLCLMAEAFFGYLLPWGQMSYWGAQVIVNLFSAIPFIGPDLSLWIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE
GDYVVSDVTLNRFFAFHVIAIPLVLLLLVVAHIVALHEVGSNNPDGIEIKAKKDAKGIPL
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
DGIPFHPYYSVHDFMGVCVFLMVFAAIIFFAPEMGGYFLESNNFVPANPLQTPPEIAPVW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHH
YFTAFYAMLRATTDPFKIVLMIVIGLLGLFALIRARGKWKVGLPVLAVLVILAMAFTESK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHCCC
FWGVVVMGSAVVSLFFLPWLDRSPVKSIRYRPFFHKVFYAIFVLAFLTLAFLGTKPPSPA
CHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ATLIAQICALVYFAFFLGMPFWTPLGKFKQPPERVRFKPH
HHHHHHHHHHHHHHHHHCCCHHCCCHHCCCCHHHCCCCCC
>Mature Secondary Structure 
ATTEKEVETTGFTGWIDRRFPMTATWKAHVSEYYAPKNFNFWYFFGSLALLVLVNQIVT
CCCCCHHHHCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
GIFLTMNYKPDATLAFASVEYIMREVPWGWLIRYMHSTGASMFFVVVYLHMFRGLLYGSY
HHEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
RKPRELVWIFGCAIFLCLMAEAFFGYLLPWGQMSYWGAQVIVNLFSAIPFIGPDLSLWIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE
GDYVVSDVTLNRFFAFHVIAIPLVLLLLVVAHIVALHEVGSNNPDGIEIKAKKDAKGIPL
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
DGIPFHPYYSVHDFMGVCVFLMVFAAIIFFAPEMGGYFLESNNFVPANPLQTPPEIAPVW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHH
YFTAFYAMLRATTDPFKIVLMIVIGLLGLFALIRARGKWKVGLPVLAVLVILAMAFTESK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHCCC
FWGVVVMGSAVVSLFFLPWLDRSPVKSIRYRPFFHKVFYAIFVLAFLTLAFLGTKPPSPA
CHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ATLIAQICALVYFAFFLGMPFWTPLGKFKQPPERVRFKPH
HHHHHHHHHHHHHHHHHCCCHHCCCHHCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA