Click here to switch to the map view.

The map label for this gene is petC [H]

Identifier: 186477489

GI number: 186477489

Start: 3096021

End: 3096776

Strand: Reverse

Name: petC [H]

Synonym: Bphy_2741

Alternate gene names: 186477489

Gene position: 3096776-3096021 (Counterclockwise)

Preceding gene: 186477490

Following gene: 186477488

Centisome position: 89.01

GC content: 57.54

Gene sequence:

>756_bases
ATGAAAAAACTGCTTTCGACGCTGGCGCTGCTCGGTGCAACCGTGCTGGCGCTGTCCACAGCGCCAGCACGCGCGGAAGG
GGAGTTTCCGCTCGACCGTGCGCCCGACAACGCGGAGAATATTGCCTCGTTGCAGCATGGCGCCCAATTGTTTGTAAACT
ATTGCCTGAATTGCCACAGCGCGAACCTGATGCGGTACAGCCGGTTGCAGGATATCGGCATTTCGCAGAAGGAAATTGAA
AAGAACCTGCTGTTCACGGCAGATAAAGTCGGCAACACGATGACGGTCGCGATGCGCCCCGACGACGCGAAAGCGTGGTT
TGGCGCGACGCCGCCCGATCTGTCGGTGGAAGCGCGTGCAAAGAACCGCGACTGGCTGTACACGTATTTGCGCAGTTTCT
ACCGCGATGACACACGGCCGACCGGCTGGAACAATATGGTGTTCGAAAACGTGAGCATGCCTCACGTGCTGTGGCAGCTT
CAGGGGCAGAGGACGGCGAAGTTCGAAGACGAAATCGACGAACACACGAAGGAAAAGGTCAGGAAATTCGCGGGATACCA
GCAGGTCACGCCGGGGACGATGTCGCCGGTAGATTATGATTCTGCTGTGGCCGACCTCGTGTCGTACCTGTCATGGATGT
CCGAACCGACGCAGAAAACCCGTCGTCAGCTTGGCGTCTGGGTGCTGCTGTTTCTGGGCGTCCTGAGCTTTTTGGCCTGG
CGACTGAACGCCGCGTACTGGAAAGATATCAAATAG

Upstream 100 bases:

>100_bases
TCCTCGGCATGCCGTTCTGGACGCCGCTTGGCAAATTCAAGCAGCCGCCCGAACGAGTGCGGTTCAAACCTCACTAACCG
CGAGCCAGGAGAAAACGAAG

Downstream 100 bases:

>100_bases
TCACGCCGTAACTGGTGTGGGGCCGGCGCAAAGGGAAGACCTGCATGACGGTTTTCCCGCTCGCTGGCCCTTTAAGTTTT
TTGAGGAAACGCAAACATGA

Product: cytochrome c1

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKKLLSTLALLGATVLALSTAPARAEGEFPLDRAPDNAENIASLQHGAQLFVNYCLNCHSANLMRYSRLQDIGISQKEIE
KNLLFTADKVGNTMTVAMRPDDAKAWFGATPPDLSVEARAKNRDWLYTYLRSFYRDDTRPTGWNNMVFENVSMPHVLWQL
QGQRTAKFEDEIDEHTKEKVRKFAGYQQVTPGTMSPVDYDSAVADLVSYLSWMSEPTQKTRRQLGVWVLLFLGVLSFLAW
RLNAAYWKDIK

Sequences:

>Translated_251_residues
MKKLLSTLALLGATVLALSTAPARAEGEFPLDRAPDNAENIASLQHGAQLFVNYCLNCHSANLMRYSRLQDIGISQKEIE
KNLLFTADKVGNTMTVAMRPDDAKAWFGATPPDLSVEARAKNRDWLYTYLRSFYRDDTRPTGWNNMVFENVSMPHVLWQL
QGQRTAKFEDEIDEHTKEKVRKFAGYQQVTPGTMSPVDYDSAVADLVSYLSWMSEPTQKTRRQLGVWVLLFLGVLSFLAW
RLNAAYWKDIK
>Mature_251_residues
MKKLLSTLALLGATVLALSTAPARAEGEFPLDRAPDNAENIASLQHGAQLFVNYCLNCHSANLMRYSRLQDIGISQKEIE
KNLLFTADKVGNTMTVAMRPDDAKAWFGATPPDLSVEARAKNRDWLYTYLRSFYRDDTRPTGWNNMVFENVSMPHVLWQL
QGQRTAKFEDEIDEHTKEKVRKFAGYQQVTPGTMSPVDYDSAVADLVSYLSWMSEPTQKTRRQLGVWVLLFLGVLSFLAW
RLNAAYWKDIK

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 28560; Mature: 28560

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLSTLALLGATVLALSTAPARAEGEFPLDRAPDNAENIASLQHGAQLFVNYCLNCHS
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
ANLMRYSRLQDIGISQKEIEKNLLFTADKVGNTMTVAMRPDDAKAWFGATPPDLSVEARA
HHHHHHHHHHHCCCCHHHHHHHHHEEHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEECC
KNRDWLYTYLRSFYRDDTRPTGWNNMVFENVSMPHVLWQLQGQRTAKFEDEIDEHTKEKV
CCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
RKFAGYQQVTPGTMSPVDYDSAVADLVSYLSWMSEPTQKTRRQLGVWVLLFLGVLSFLAW
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RLNAAYWKDIK
HHHHHHHCCCC
>Mature Secondary Structure
MKKLLSTLALLGATVLALSTAPARAEGEFPLDRAPDNAENIASLQHGAQLFVNYCLNCHS
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
ANLMRYSRLQDIGISQKEIEKNLLFTADKVGNTMTVAMRPDDAKAWFGATPPDLSVEARA
HHHHHHHHHHHCCCCHHHHHHHHHEEHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEECC
KNRDWLYTYLRSFYRDDTRPTGWNNMVFENVSMPHVLWQLQGQRTAKFEDEIDEHTKEKV
CCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
RKFAGYQQVTPGTMSPVDYDSAVADLVSYLSWMSEPTQKTRRQLGVWVLLFLGVLSFLAW
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RLNAAYWKDIK
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA