Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is ytfP [H]

Identifier: 186477485

GI number: 186477485

Start: 3092068

End: 3093336

Strand: Direct

Name: ytfP [H]

Synonym: Bphy_2737

Alternate gene names: 186477485

Gene position: 3092068-3093336 (Clockwise)

Preceding gene: 186477483

Following gene: 186477493

Centisome position: 88.87

GC content: 66.35

Gene sequence:

>1269_bases
ATGTCGAAATCGCCCGAAATCACTGCGGATCACGTCCGCGTCGCCGTCGTCGGCGGCGGCCCTGCGGGGCTGATGGCCGC
CGAAGCGCTGGCTCGCGGCGGCGTGCGCGTCGACGTCTACGACGCGATGCCGTCCGTCGGCCGCAAGTTTCTGATGGCGG
GTAAGGGCGGGATGAACATCACGCATTCGGAGCCGATTGAGCCGTTTGCCGGCCGCTACGGCAAGCGCCGCGCCGACATC
GCACCGCTGCTCGACGCGTTCGGGCCGGATGCGCTGCGCGGCTGGCTCGACGATCTGGGCGTCGCGACGTTCGTCGGCAG
TTCGGGCCGCGTGTTTCCCGTCGACATGAAGGCCGCGCCGATGTTGCGCGCGTGGCTACATCGGCTTCGCGGAGCGGGCG
TGCAGTTCCATATGCGGCACAAGTGGAACGGCTGGCGCGCGTCGGAATCATCGAGCGCGCACGGATTAGGTTTCACGACG
CCGCAGGGCGAACGCGAAGTGACGGCAGACGCCGTCGTGTTTGCGCTGGGCGGGGGAAGTTGGGCGCGCCTTGGCTCCGA
TGCCGCGTGGGTTCCCTTGATGCAGCAACGCCATATTCCCGTCGCACCGCTCCTCCCGAGCAACTGCGGCTTCGACGCCG
ACTGGACCGATTACTTCCGCGATCGTTACGCGGGTCAGCCGGTGAAGCCAGTTTCGATAACCGTCGAAGGCGTGGACGGC
ACGATCCAGCATCGGCAAGGCGAGTTCGTCGTGACGTCGACGGGAATCGAGGGAAGCCTCGTGTATGCATTGTCCGCGAC
GATCCGCGATCGCCTCCTGGCCGACGGCGAAGCGACCATACGGCTCGATCTTGCGCCGGGTCTGAGCGCGCAACGCGTGA
TCGACGAGGTGACGCGACCGCGCGGATCACGCTCGATGTCGAGCCATCTCCATAGCCGCATCGGCATCACGGGGGTCAAG
CTGGGTTTGCTGCACGAGTGCGTGTCGAAGGACGATTTCACCGATGCCGCGAAGCTCGCGCAAGCGATCAAGTCCCTGCC
GTTGCGGCTGGCGCGTACGCGCGCCATCGATGAAGCGATCAGCAGCGCGGGCGGCATCCCGTTCGAAGCGCTCGATCGCG
CGTTGATGATCCGCCATCTGCCGGGCGTGTTTTGCGCGGGGGAGATGCTCGATTGGGAAGCCCCGACGGGTGGCTATCTG
CTGACCGCATGCTTCGCGAGCGGCCTCGTAGCGGGCAATGGCGCGTTGGCGTATCTTCAGACCCCCTGA

Upstream 100 bases:

>100_bases
AATCGCGGCGCGACCCGTTTGCCCCGCCTTCTGCCCGGTGGGACAATACCGGCCTTCGTGCACAACGCGCTTTCCGCCCT
TCACCCTCCAGTCTTCATCG

Downstream 100 bases:

>100_bases
CCCGCAGCCTCGCGCGTCATCTGGCCTTGAGCCGCCACAGCGAAGTCACTTCGGCCATGCGCGCCGCATGCAGCGGGTCT
GAAGCATCGGTTGCTTTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MSKSPEITADHVRVAVVGGGPAGLMAAEALARGGVRVDVYDAMPSVGRKFLMAGKGGMNITHSEPIEPFAGRYGKRRADI
APLLDAFGPDALRGWLDDLGVATFVGSSGRVFPVDMKAAPMLRAWLHRLRGAGVQFHMRHKWNGWRASESSSAHGLGFTT
PQGEREVTADAVVFALGGGSWARLGSDAAWVPLMQQRHIPVAPLLPSNCGFDADWTDYFRDRYAGQPVKPVSITVEGVDG
TIQHRQGEFVVTSTGIEGSLVYALSATIRDRLLADGEATIRLDLAPGLSAQRVIDEVTRPRGSRSMSSHLHSRIGITGVK
LGLLHECVSKDDFTDAAKLAQAIKSLPLRLARTRAIDEAISSAGGIPFEALDRALMIRHLPGVFCAGEMLDWEAPTGGYL
LTACFASGLVAGNGALAYLQTP

Sequences:

>Translated_422_residues
MSKSPEITADHVRVAVVGGGPAGLMAAEALARGGVRVDVYDAMPSVGRKFLMAGKGGMNITHSEPIEPFAGRYGKRRADI
APLLDAFGPDALRGWLDDLGVATFVGSSGRVFPVDMKAAPMLRAWLHRLRGAGVQFHMRHKWNGWRASESSSAHGLGFTT
PQGEREVTADAVVFALGGGSWARLGSDAAWVPLMQQRHIPVAPLLPSNCGFDADWTDYFRDRYAGQPVKPVSITVEGVDG
TIQHRQGEFVVTSTGIEGSLVYALSATIRDRLLADGEATIRLDLAPGLSAQRVIDEVTRPRGSRSMSSHLHSRIGITGVK
LGLLHECVSKDDFTDAAKLAQAIKSLPLRLARTRAIDEAISSAGGIPFEALDRALMIRHLPGVFCAGEMLDWEAPTGGYL
LTACFASGLVAGNGALAYLQTP
>Mature_421_residues
SKSPEITADHVRVAVVGGGPAGLMAAEALARGGVRVDVYDAMPSVGRKFLMAGKGGMNITHSEPIEPFAGRYGKRRADIA
PLLDAFGPDALRGWLDDLGVATFVGSSGRVFPVDMKAAPMLRAWLHRLRGAGVQFHMRHKWNGWRASESSSAHGLGFTTP
QGEREVTADAVVFALGGGSWARLGSDAAWVPLMQQRHIPVAPLLPSNCGFDADWTDYFRDRYAGQPVKPVSITVEGVDGT
IQHRQGEFVVTSTGIEGSLVYALSATIRDRLLADGEATIRLDLAPGLSAQRVIDEVTRPRGSRSMSSHLHSRIGITGVKL
GLLHECVSKDDFTDAAKLAQAIKSLPLRLARTRAIDEAISSAGGIPFEALDRALMIRHLPGVFCAGEMLDWEAPTGGYLL
TACFASGLVAGNGALAYLQTP

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 44986; Mature: 44855

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSPEITADHVRVAVVGGGPAGLMAAEALARGGVRVDVYDAMPSVGRKFLMAGKGGMNI
CCCCCCCEECCEEEEEECCCCHHHHHHHHHHHCCCEEEEHHHCHHHCHHEEEECCCCCCC
THSEPIEPFAGRYGKRRADIAPLLDAFGPDALRGWLDDLGVATFVGSSGRVFPVDMKAAP
CCCCCCCHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHCCHHEEECCCCCEEEECCCHHH
MLRAWLHRLRGAGVQFHMRHKWNGWRASESSSAHGLGFTTPQGEREVTADAVVFALGGGS
HHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEEEECCCC
WARLGSDAAWVPLMQQRHIPVAPLLPSNCGFDADWTDYFRDRYAGQPVKPVSITVEGVDG
HHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCC
TIQHRQGEFVVTSTGIEGSLVYALSATIRDRLLADGEATIRLDLAPGLSAQRVIDEVTRP
EEEECCCCEEEEECCCCCEEEEEHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCC
RGSRSMSSHLHSRIGITGVKLGLLHECVSKDDFTDAAKLAQAIKSLPLRLARTRAIDEAI
CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSAGGIPFEALDRALMIRHLPGVFCAGEMLDWEAPTGGYLLTACFASGLVAGNGALAYLQ
HHCCCCCHHHHHHHHHHHHCCCCEECCCEECCCCCCCCHHHHHHHHCCEEECCCEEEEEE
TP
CC
>Mature Secondary Structure 
SKSPEITADHVRVAVVGGGPAGLMAAEALARGGVRVDVYDAMPSVGRKFLMAGKGGMNI
CCCCCCEECCEEEEEECCCCHHHHHHHHHHHCCCEEEEHHHCHHHCHHEEEECCCCCCC
THSEPIEPFAGRYGKRRADIAPLLDAFGPDALRGWLDDLGVATFVGSSGRVFPVDMKAAP
CCCCCCCHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHCCHHEEECCCCCEEEECCCHHH
MLRAWLHRLRGAGVQFHMRHKWNGWRASESSSAHGLGFTTPQGEREVTADAVVFALGGGS
HHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEEEECCCC
WARLGSDAAWVPLMQQRHIPVAPLLPSNCGFDADWTDYFRDRYAGQPVKPVSITVEGVDG
HHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCC
TIQHRQGEFVVTSTGIEGSLVYALSATIRDRLLADGEATIRLDLAPGLSAQRVIDEVTRP
EEEECCCCEEEEECCCCCEEEEEHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCC
RGSRSMSSHLHSRIGITGVKLGLLHECVSKDDFTDAAKLAQAIKSLPLRLARTRAIDEAI
CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSAGGIPFEALDRALMIRHLPGVFCAGEMLDWEAPTGGYLLTACFASGLVAGNGALAYLQ
HHCCCCCHHHHHHHHHHHHCCCCEECCCEECCCCCCCCHHHHHHHHCCEEECCCEEEEEE
TP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]