| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is ftsZ [H]
Identifier: 186477416
GI number: 186477416
Start: 3009423
End: 3010616
Strand: Reverse
Name: ftsZ [H]
Synonym: Bphy_2668
Alternate gene names: 186477416
Gene position: 3010616-3009423 (Counterclockwise)
Preceding gene: 186477417
Following gene: 186477415
Centisome position: 86.53
GC content: 63.9
Gene sequence:
>1194_bases ATGGAATTCCAGATGCTGGAAACGGAAACCAACGGCACCATCATCAAGGTGGTGGGCGTCGGTGGTGCGGGCGGCAATGC CGTCATGCACATGATCAATCGCGGCGTGCAAGGCGTCGACTTCATCGTGATGAACACGGACGCTCAGGCGCTGTCGCGCT CGCGCGCGCCGAACGTCATCCAGTTGGGCAATACGGGTCTGGGCGCAGGCGCCAAGCCGGAAATGGGCCGCGCAGCAGCA GAAGAGGCACGTGAGCGCATCGCGGACGCACTGCGTGGTGCACACATGGTGTTCATCACGGCAGGCATGGGCGGCGGCAC GGGCACGGGCGCAGCACCCGTGGTCGCGCAGATCGCCAAGGAAATGGGCATTCTGACGGTGGGCGTGGTCAGCAAGCCGT TCGAGTTCGAAGGCGGCAAGCGCATGCGCGTCGCCGAAGCCGGTTCGCAGCAACTGGAGGATCACGTCGACTCGCTGATC GTCGTTCTGAACGACAAGCTGTTCGAGGTGATGGGCGATGACGCCGAAATGGACAAGTGCTTCCAGTGCGCTGACGACGT GCTCAACAACGCAGTTGCCGGTATCGCCGAAATCATCAACGTCGACGGTCTGGTGAACGTCGACTTCGAAGACGTGAAGA CGGTGATGGGCGAGCAGGGCAAGGCGATGATGGGCACGGCGACGGTGGCCGGCGTCGATCGCGCGCGTCTCGCGGCGGAA CAGGCTGTCGCCAGCCCGCTGCTGGAAGGTGTCGATCTGTCGGGCGCACGTGGCGTACTGGTGAACATCACGTCGAGCCG CTCGCTGCGTCTGTCGGAAACGCGCGAAGTGATGAACACGATCAAGAGCTATGCTGCTGATGACGCGACCGTGATTTTCG GCGCCGTGTACGACGACGCGATGGGCGATGCGCTGCGCGTAACCGTGGTGGCAACGGGCCTGGGCCGCGCAGCGAAGAAA CAGCAGCAAACGCCGATGACGCTGCTGCGCACGGGCACGGACAACCAGCCGGTCGGCGCCATGCAGCACGTGTACACGCC GCAGCATGCAGCGACGGCGGACTACGGTTCGCTGGACACGCCGGCAGTTTGGCGTACCTCGCGTGACACGGCTGCTTCGC ACGTGCAGGCGCTGCAGGAAAAGGGCGTCGATACGTACGACATCCCGGCCTTCTTGCGCAAGCAGGCAGACTGA
Upstream 100 bases:
>100_bases ATTCGCGCTGGTGCCGGCGGCTGGCGCGCGACAGGAGGTTGCCCGATCTCCTGCCGAATAACGGCCGAGTAGCGGGTACT TTTTTCTTGACGGAGGCAAC
Downstream 100 bases:
>100_bases GGCTCACGCAGGAGCGGGCTTTCTGCGGCGTAATCGTGATTCGTTGATTACGCTCGGCAGAAGTGCACGAGCGTGGCGGG TGGAATGGCAAACAGGCCGC
Product: cell division protein FtsZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MEFQMLETETNGTIIKVVGVGGAGGNAVMHMINRGVQGVDFIVMNTDAQALSRSRAPNVIQLGNTGLGAGAKPEMGRAAA EEARERIADALRGAHMVFITAGMGGGTGTGAAPVVAQIAKEMGILTVGVVSKPFEFEGGKRMRVAEAGSQQLEDHVDSLI VVLNDKLFEVMGDDAEMDKCFQCADDVLNNAVAGIAEIINVDGLVNVDFEDVKTVMGEQGKAMMGTATVAGVDRARLAAE QAVASPLLEGVDLSGARGVLVNITSSRSLRLSETREVMNTIKSYAADDATVIFGAVYDDAMGDALRVTVVATGLGRAAKK QQQTPMTLLRTGTDNQPVGAMQHVYTPQHAATADYGSLDTPAVWRTSRDTAASHVQALQEKGVDTYDIPAFLRKQAD
Sequences:
>Translated_397_residues MEFQMLETETNGTIIKVVGVGGAGGNAVMHMINRGVQGVDFIVMNTDAQALSRSRAPNVIQLGNTGLGAGAKPEMGRAAA EEARERIADALRGAHMVFITAGMGGGTGTGAAPVVAQIAKEMGILTVGVVSKPFEFEGGKRMRVAEAGSQQLEDHVDSLI VVLNDKLFEVMGDDAEMDKCFQCADDVLNNAVAGIAEIINVDGLVNVDFEDVKTVMGEQGKAMMGTATVAGVDRARLAAE QAVASPLLEGVDLSGARGVLVNITSSRSLRLSETREVMNTIKSYAADDATVIFGAVYDDAMGDALRVTVVATGLGRAAKK QQQTPMTLLRTGTDNQPVGAMQHVYTPQHAATADYGSLDTPAVWRTSRDTAASHVQALQEKGVDTYDIPAFLRKQAD >Mature_397_residues MEFQMLETETNGTIIKVVGVGGAGGNAVMHMINRGVQGVDFIVMNTDAQALSRSRAPNVIQLGNTGLGAGAKPEMGRAAA EEARERIADALRGAHMVFITAGMGGGTGTGAAPVVAQIAKEMGILTVGVVSKPFEFEGGKRMRVAEAGSQQLEDHVDSLI VVLNDKLFEVMGDDAEMDKCFQCADDVLNNAVAGIAEIINVDGLVNVDFEDVKTVMGEQGKAMMGTATVAGVDRARLAAE QAVASPLLEGVDLSGARGVLVNITSSRSLRLSETREVMNTIKSYAADDATVIFGAVYDDAMGDALRVTVVATGLGRAAKK QQQTPMTLLRTGTDNQPVGAMQHVYTPQHAATADYGSLDTPAVWRTSRDTAASHVQALQEKGVDTYDIPAFLRKQAD
Specific function: This protein is essential to the cell-division process. It seems to assemble into a dynamic ring on the inner surface of the cytoplasmic membrane at the place where division will occur, and the formation of the ring is the signal for septation to begin. B
COG id: COG0206
COG function: function code D; Cell division GTPase
Gene ontology:
Cell location: Cytoplasm. Note=Assembles at the inner surface of the cytoplasmic membrane (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsZ family [H]
Homologues:
Organism=Escherichia coli, GI1786284, Length=377, Percent_Identity=51.9893899204244, Blast_Score=313, Evalue=9e-87,
Paralogues:
None
Copy number: 320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020805 - InterPro: IPR000158 - InterPro: IPR008280 - InterPro: IPR018316 - InterPro: IPR003008 [H]
Pfam domain/function: PF00091 Tubulin [H]
EC number: NA
Molecular weight: Translated: 41712; Mature: 41712
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS01135 FTSZ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFQMLETETNGTIIKVVGVGGAGGNAVMHMINRGVQGVDFIVMNTDAQALSRSRAPNVI CCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCEE QLGNTGLGAGAKPEMGRAAAEEARERIADALRGAHMVFITAGMGGGTGTGAAPVVAQIAK EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHH EMGILTVGVVSKPFEFEGGKRMRVAEAGSQQLEDHVDSLIVVLNDKLFEVMGDDAEMDKC HCCEEEEEECCCCCCCCCCCEEEEHHCCHHHHHHHHHHEEHHHHHHHHHHHCCCCHHHHH FQCADDVLNNAVAGIAEIINVDGLVNVDFEDVKTVMGEQGKAMMGTATVAGVDRARLAAE HHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCCEEECHHHHHCCHHHHHHHH QAVASPLLEGVDLSGARGVLVNITSSRSLRLSETREVMNTIKSYAADDATVIFGAVYDDA HHHHHHHHHCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEEHHHHH MGDALRVTVVATGLGRAAKKQQQTPMTLLRTGTDNQPVGAMQHVYTPQHAATADYGSLDT CCCEEEEEEEEECCCHHHHHHHCCCHHEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCC PAVWRTSRDTAASHVQALQEKGVDTYDIPAFLRKQAD CCEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCC >Mature Secondary Structure MEFQMLETETNGTIIKVVGVGGAGGNAVMHMINRGVQGVDFIVMNTDAQALSRSRAPNVI CCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCEE QLGNTGLGAGAKPEMGRAAAEEARERIADALRGAHMVFITAGMGGGTGTGAAPVVAQIAK EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHH EMGILTVGVVSKPFEFEGGKRMRVAEAGSQQLEDHVDSLIVVLNDKLFEVMGDDAEMDKC HCCEEEEEECCCCCCCCCCCEEEEHHCCHHHHHHHHHHEEHHHHHHHHHHHCCCCHHHHH FQCADDVLNNAVAGIAEIINVDGLVNVDFEDVKTVMGEQGKAMMGTATVAGVDRARLAAE HHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCCEEECHHHHHCCHHHHHHHH QAVASPLLEGVDLSGARGVLVNITSSRSLRLSETREVMNTIKSYAADDATVIFGAVYDDA HHHHHHHHHCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEEHHHHH MGDALRVTVVATGLGRAAKKQQQTPMTLLRTGTDNQPVGAMQHVYTPQHAATADYGSLDT CCCEEEEEEEEECCCHHHHHHHCCCHHEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCC PAVWRTSRDTAASHVQALQEKGVDTYDIPAFLRKQAD CCEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11443086 [H]