| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477415
Identifier: 186477415
GI number: 186477415
Start: 3008677
End: 3009186
Strand: Reverse
Name: 186477415
Synonym: Bphy_2667
Alternate gene names: NA
Gene position: 3009186-3008677 (Counterclockwise)
Preceding gene: 186477416
Following gene: 186477414
Centisome position: 86.49
GC content: 64.12
Gene sequence:
>510_bases ATGATTCAGGTAGGTGAAAAGCTTCCCCCGGCGACCGTTTACGAGTTGATCGAAGACGCTCGCGAGGGCTGCACGATCGG GCCGAACAGCTTCGACGTGCGCGAGCAGACGGCCGGCAAGCGCGTGGTGATCTTCGGATTGCCCGGCGCGTTCACGCCGA CCTGTTCGGCGAAGCACGTGCCGGGCTACGTCGAACAGGCAGACAAGTTGCACGCTGCCGGGATCGACGAAATCTGGTGC GTATCCGTCAACGACGCGTTCGTGATGGGCGCGTGGGCACGCGATCAGCACGCCTCGGGCAAGGTGCGCATGATGGCGGA CGGCAGCGCGGCTTTCACCCGAGCCCTCGGTCTGGAGCAGGATCTGTCGGCGCGCGGCATGGGAATCCGTTCCCAGCGCT ACGCAATGGTGGTCGACGACGGCGTGGTCAAGACGCTGCACGTCGAAGCACCCGGCAAGTTCGAAGTGAGCGATGCGGCC AGTATTCTCGCGACGTTGAGCCAGCCATGA
Upstream 100 bases:
>100_bases TCGTTAGCACGAAGCGGTTCGGGCCACTGTCGCCAGATGAAACGTCCACTGCGGCACGAGTACGTGCGAGCGTGCTCCGT ATCGATGCGAAGGAACGAGC
Downstream 100 bases:
>100_bases CGCGGCCTTGAGGCTTCGTCGCGGCGATAGACTGCGGTCGTTGCGCTGCGGCAACGCTTTTCGTGACGCTGTTGTGACAG GCCGTAACGCGGGCCGATGA
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MIQVGEKLPPATVYELIEDAREGCTIGPNSFDVREQTAGKRVVIFGLPGAFTPTCSAKHVPGYVEQADKLHAAGIDEIWC VSVNDAFVMGAWARDQHASGKVRMMADGSAAFTRALGLEQDLSARGMGIRSQRYAMVVDDGVVKTLHVEAPGKFEVSDAA SILATLSQP
Sequences:
>Translated_169_residues MIQVGEKLPPATVYELIEDAREGCTIGPNSFDVREQTAGKRVVIFGLPGAFTPTCSAKHVPGYVEQADKLHAAGIDEIWC VSVNDAFVMGAWARDQHASGKVRMMADGSAAFTRALGLEQDLSARGMGIRSQRYAMVVDDGVVKTLHVEAPGKFEVSDAA SILATLSQP >Mature_169_residues MIQVGEKLPPATVYELIEDAREGCTIGPNSFDVREQTAGKRVVIFGLPGAFTPTCSAKHVPGYVEQADKLHAAGIDEIWC VSVNDAFVMGAWARDQHASGKVRMMADGSAAFTRALGLEQDLSARGMGIRSQRYAMVVDDGVVKTLHVEAPGKFEVSDAA SILATLSQP
Specific function: Unknown
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=168, Percent_Identity=42.8571428571429, Blast_Score=126, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6323138, Length=134, Percent_Identity=36.5671641791045, Blast_Score=79, Evalue=3e-16, Organism=Drosophila melanogaster, GI78706776, Length=153, Percent_Identity=47.7124183006536, Blast_Score=143, Evalue=6e-35, Organism=Drosophila melanogaster, GI78709078, Length=153, Percent_Identity=47.7124183006536, Blast_Score=143, Evalue=6e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013740 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 18049; Mature: 18049
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQVGEKLPPATVYELIEDAREGCTIGPNSFDVREQTAGKRVVIFGLPGAFTPTCSAKHV CCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCC PGYVEQADKLHAAGIDEIWCVSVNDAFVMGAWARDQHASGKVRMMADGSAAFTRALGLEQ CCHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHCCCC DLSARGMGIRSQRYAMVVDDGVVKTLHVEAPGKFEVSDAASILATLSQP CCHHCCCCCCCCEEEEEEECCCEEEEEECCCCCEEHHHHHHHHHHCCCC >Mature Secondary Structure MIQVGEKLPPATVYELIEDAREGCTIGPNSFDVREQTAGKRVVIFGLPGAFTPTCSAKHV CCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCC PGYVEQADKLHAAGIDEIWCVSVNDAFVMGAWARDQHASGKVRMMADGSAAFTRALGLEQ CCHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHCCCC DLSARGMGIRSQRYAMVVDDGVVKTLHVEAPGKFEVSDAASILATLSQP CCHHCCCCCCCCEEEEEEECCCEEEEEECCCCCEEHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]