Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186477415

Identifier: 186477415

GI number: 186477415

Start: 3008677

End: 3009186

Strand: Reverse

Name: 186477415

Synonym: Bphy_2667

Alternate gene names: NA

Gene position: 3009186-3008677 (Counterclockwise)

Preceding gene: 186477416

Following gene: 186477414

Centisome position: 86.49

GC content: 64.12

Gene sequence:

>510_bases
ATGATTCAGGTAGGTGAAAAGCTTCCCCCGGCGACCGTTTACGAGTTGATCGAAGACGCTCGCGAGGGCTGCACGATCGG
GCCGAACAGCTTCGACGTGCGCGAGCAGACGGCCGGCAAGCGCGTGGTGATCTTCGGATTGCCCGGCGCGTTCACGCCGA
CCTGTTCGGCGAAGCACGTGCCGGGCTACGTCGAACAGGCAGACAAGTTGCACGCTGCCGGGATCGACGAAATCTGGTGC
GTATCCGTCAACGACGCGTTCGTGATGGGCGCGTGGGCACGCGATCAGCACGCCTCGGGCAAGGTGCGCATGATGGCGGA
CGGCAGCGCGGCTTTCACCCGAGCCCTCGGTCTGGAGCAGGATCTGTCGGCGCGCGGCATGGGAATCCGTTCCCAGCGCT
ACGCAATGGTGGTCGACGACGGCGTGGTCAAGACGCTGCACGTCGAAGCACCCGGCAAGTTCGAAGTGAGCGATGCGGCC
AGTATTCTCGCGACGTTGAGCCAGCCATGA

Upstream 100 bases:

>100_bases
TCGTTAGCACGAAGCGGTTCGGGCCACTGTCGCCAGATGAAACGTCCACTGCGGCACGAGTACGTGCGAGCGTGCTCCGT
ATCGATGCGAAGGAACGAGC

Downstream 100 bases:

>100_bases
CGCGGCCTTGAGGCTTCGTCGCGGCGATAGACTGCGGTCGTTGCGCTGCGGCAACGCTTTTCGTGACGCTGTTGTGACAG
GCCGTAACGCGGGCCGATGA

Product: redoxin domain-containing protein

Products: NA

Alternate protein names: Thioredoxin reductase [H]

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MIQVGEKLPPATVYELIEDAREGCTIGPNSFDVREQTAGKRVVIFGLPGAFTPTCSAKHVPGYVEQADKLHAAGIDEIWC
VSVNDAFVMGAWARDQHASGKVRMMADGSAAFTRALGLEQDLSARGMGIRSQRYAMVVDDGVVKTLHVEAPGKFEVSDAA
SILATLSQP

Sequences:

>Translated_169_residues
MIQVGEKLPPATVYELIEDAREGCTIGPNSFDVREQTAGKRVVIFGLPGAFTPTCSAKHVPGYVEQADKLHAAGIDEIWC
VSVNDAFVMGAWARDQHASGKVRMMADGSAAFTRALGLEQDLSARGMGIRSQRYAMVVDDGVVKTLHVEAPGKFEVSDAA
SILATLSQP
>Mature_169_residues
MIQVGEKLPPATVYELIEDAREGCTIGPNSFDVREQTAGKRVVIFGLPGAFTPTCSAKHVPGYVEQADKLHAAGIDEIWC
VSVNDAFVMGAWARDQHASGKVRMMADGSAAFTRALGLEQDLSARGMGIRSQRYAMVVDDGVVKTLHVEAPGKFEVSDAA
SILATLSQP

Specific function: Unknown

COG id: COG0678

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI6912238, Length=168, Percent_Identity=42.8571428571429, Blast_Score=126, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6323138, Length=134, Percent_Identity=36.5671641791045, Blast_Score=79, Evalue=3e-16,
Organism=Drosophila melanogaster, GI78706776, Length=153, Percent_Identity=47.7124183006536, Blast_Score=143, Evalue=6e-35,
Organism=Drosophila melanogaster, GI78709078, Length=153, Percent_Identity=47.7124183006536, Blast_Score=143, Evalue=6e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013740
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF08534 Redoxin [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 18049; Mature: 18049

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQVGEKLPPATVYELIEDAREGCTIGPNSFDVREQTAGKRVVIFGLPGAFTPTCSAKHV
CCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCC
PGYVEQADKLHAAGIDEIWCVSVNDAFVMGAWARDQHASGKVRMMADGSAAFTRALGLEQ
CCHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHCCCC
DLSARGMGIRSQRYAMVVDDGVVKTLHVEAPGKFEVSDAASILATLSQP
CCHHCCCCCCCCEEEEEEECCCEEEEEECCCCCEEHHHHHHHHHHCCCC
>Mature Secondary Structure
MIQVGEKLPPATVYELIEDAREGCTIGPNSFDVREQTAGKRVVIFGLPGAFTPTCSAKHV
CCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCC
PGYVEQADKLHAAGIDEIWCVSVNDAFVMGAWARDQHASGKVRMMADGSAAFTRALGLEQ
CCHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHCCCC
DLSARGMGIRSQRYAMVVDDGVVKTLHVEAPGKFEVSDAASILATLSQP
CCHHCCCCCCCCEEEEEEECCCEEEEEECCCCCEEHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]