| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477410
Identifier: 186477410
GI number: 186477410
Start: 3001469
End: 3002338
Strand: Reverse
Name: 186477410
Synonym: Bphy_2662
Alternate gene names: NA
Gene position: 3002338-3001469 (Counterclockwise)
Preceding gene: 186477411
Following gene: 186477409
Centisome position: 86.29
GC content: 61.72
Gene sequence:
>870_bases ATGGATAAACTTGAACAATTCCTGACGCGCGCCGAAGCCGTCCTGGTGCGGCTTGAGGCAATGCTTCCTCCCGCCGCGCC GGAGATCGACTGGTCGGCGGCTGTTGCGTTCCGCTGGCGCAAGCGCCAGGGGCGCGGCTATCTGCAGCCGGTGCCCGCCA TCTCGCTGATCTCGCTCGACGATTTGCAGAACATCGATCGCCAGAAGAACCTGATCGAGCAGAACACGAAGCAGTTCGTC AAGAAGCAGCCCGCGAACAACGTCCTGCTGACGGGCGCGCGCGGCACGGGCAAGTCATCGCTGATCAAGGCTTGTCTGAA TGCGTACTCGAAGGACGGTCTGCGGCTGATCGAAGTCGACAAGGACGATCTGCACGATTTAGGCGATATCGTCGATCTGA TTTCGGCGCGTCCCGAGCGCTTCATCGTGTTCTGCGACGACCTGTCGTTCGAAGAAGGCGAGTCGGGCTACAAGGCGCTG AAGGTCGCGCTTGACGGATCGGTGGCGGCGCAGTCGGACAACGTGCTGATCTACGCGACCTCGAACCGCCGGCATTTGCT GCCGGAATACATGAGCGACAACGAGACGTACAAGCACACGTCCGACGGCGAGATCCATCCGGGCGAAGTCGTCGAAGAGA AGATTTCGCTGTCCGAGCGCTTCGGCCTGTGGGTCAGCTTTTATCCGTTCAAGCAGGACGACTATCTGTCGATCGTCGCG CATTGGCTGCATCACTTCGGCTGCAGCGATGCCGACGTCGAAACCGCGCGCGGTGACGCGTTGATCTGGGCGTTGGAGCG CGGTTCGCGCTCCGGACGCGTCGCATGGCAGTTCGCGCGCGACTGGTCGGGCAAGCGGGCGCAAGCATGA
Upstream 100 bases:
>100_bases ATCTGGACGTGCGATCTGTCGCACGAGTACGTGAGCATCAATGCCGACTACCGTTCCTGATCCGCTTCCGATTCGCTCCT GATTTGCTCCCATTTACCAC
Downstream 100 bases:
>100_bases GCGACGCAGCGCATAACGGCGCGCCGAAGGCCGCAGACGTCAACGAAGCGGGCCGGCCGGTGACGGAAGTGGCCGTCGGC GTGCTTGTTCGACCCGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; Intermediate Filament Protein; AAA+ Superfamily ATPase; AAA ATPase Superfamily
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MDKLEQFLTRAEAVLVRLEAMLPPAAPEIDWSAAVAFRWRKRQGRGYLQPVPAISLISLDDLQNIDRQKNLIEQNTKQFV KKQPANNVLLTGARGTGKSSLIKACLNAYSKDGLRLIEVDKDDLHDLGDIVDLISARPERFIVFCDDLSFEEGESGYKAL KVALDGSVAAQSDNVLIYATSNRRHLLPEYMSDNETYKHTSDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLSIVA HWLHHFGCSDADVETARGDALIWALERGSRSGRVAWQFARDWSGKRAQA
Sequences:
>Translated_289_residues MDKLEQFLTRAEAVLVRLEAMLPPAAPEIDWSAAVAFRWRKRQGRGYLQPVPAISLISLDDLQNIDRQKNLIEQNTKQFV KKQPANNVLLTGARGTGKSSLIKACLNAYSKDGLRLIEVDKDDLHDLGDIVDLISARPERFIVFCDDLSFEEGESGYKAL KVALDGSVAAQSDNVLIYATSNRRHLLPEYMSDNETYKHTSDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLSIVA HWLHHFGCSDADVETARGDALIWALERGSRSGRVAWQFARDWSGKRAQA >Mature_289_residues MDKLEQFLTRAEAVLVRLEAMLPPAAPEIDWSAAVAFRWRKRQGRGYLQPVPAISLISLDDLQNIDRQKNLIEQNTKQFV KKQPANNVLLTGARGTGKSSLIKACLNAYSKDGLRLIEVDKDDLHDLGDIVDLISARPERFIVFCDDLSFEEGESGYKAL KVALDGSVAAQSDNVLIYATSNRRHLLPEYMSDNETYKHTSDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLSIVA HWLHHFGCSDADVETARGDALIWALERGSRSGRVAWQFARDWSGKRAQA
Specific function: Unknown
COG id: COG2607
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32566; Mature: 32566
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLEQFLTRAEAVLVRLEAMLPPAAPEIDWSAAVAFRWRKRQGRGYLQPVPAISLISLD CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHH DLQNIDRQKNLIEQNTKQFVKKQPANNVLLTGARGTGKSSLIKACLNAYSKDGLRLIEVD HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEC KDDLHDLGDIVDLISARPERFIVFCDDLSFEEGESGYKALKVALDGSVAAQSDNVLIYAT CHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCEEECCCCEEEEEE SNRRHLLPEYMSDNETYKHTSDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLSIVA CCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH HWLHHFGCSDADVETARGDALIWALERGSRSGRVAWQFARDWSGKRAQA HHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MDKLEQFLTRAEAVLVRLEAMLPPAAPEIDWSAAVAFRWRKRQGRGYLQPVPAISLISLD CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHH DLQNIDRQKNLIEQNTKQFVKKQPANNVLLTGARGTGKSSLIKACLNAYSKDGLRLIEVD HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEC KDDLHDLGDIVDLISARPERFIVFCDDLSFEEGESGYKALKVALDGSVAAQSDNVLIYAT CHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCEEECCCCEEEEEE SNRRHLLPEYMSDNETYKHTSDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLSIVA CCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH HWLHHFGCSDADVETARGDALIWALERGSRSGRVAWQFARDWSGKRAQA HHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA