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The map label for this gene is dgoA [H]

Identifier: 186477365

GI number: 186477365

Start: 2956066

End: 2956746

Strand: Reverse

Name: dgoA [H]

Synonym: Bphy_2617

Alternate gene names: 186477365

Gene position: 2956746-2956066 (Counterclockwise)

Preceding gene: 186477366

Following gene: 186477364

Centisome position: 84.98

GC content: 67.11

Gene sequence:

>681_bases
ATGCAACTCGATCTGAATCTGCCCGCCCCGTACCAGCCGCACGCCGGCCTGATGGCCGCGTTCGAAGTATGTCCGCTGAT
CGCGATCCTGCGCGGCGTCACGCCAGCCGATGCCGCCGATCAGGGTCGCGCGCTATACGAAGCCGGCTTTCGCATCATCG
AAGTGCCGCTCAACTCGCCGCATCCTTTCGACAGCATCGCGGCGATCCGTCAGGCTGTGCCTGCCGACTGCATCGTCGGC
GCGGGCACGGTGCTGCGCGGCGAACTCGTGCATGACGTGAAGGCGGCGGGCGGCGAGCTGATCGTGATGCCGCACAGCGA
CCCCGAAGTCGTGACGACCGCGAAGTCGCTCGCGATGGCATGCGCGCCCGGCGTCGCGACGATGACGGAAGCGTTCGTTG
CGCTGAAGAACGGCGCCGACGTGCTGAAGATGTTCCCGGCCGAGCAGCTCGGCTGTCAGGTCGTGAAGGCGTGGCGCGCG
GTGCTGCACAAGGACGTGCCGCTGCTGCCCGTCGGTGGCATTGCGCCCGACAACATGGGGCCATTCCTGTCCGCCGGCGC
GAACGGTTTCGGACTTGGCTCGGCGCTTTACAAGCCCGGCCAGCCGGCGACGACGACGGCTTCGCATGCGAAGGCATACA
TCAACGGTCTGCGCATCGCGCGCGCGGGCGTGAAGAAATGA

Upstream 100 bases:

>100_bases
CAAGCGGGCCTCGTCAGCGAAGCATCGGGCGCCGCGCAGCCGGGCTGAAAACGCGACTGACCGCAACCTGAGCCGCGCGC
AAAGAACCCAAGGAACCGAC

Downstream 100 bases:

>100_bases
AACGGCTGCAAGGGAAGGTTGCGCTGGTGACGGGCGCCGGACGGGGCATCGGCGCGGCGATCGCGACGGCGTTCGCGCGC
GAGGGCGCGGCTGTCGTGCT

Product: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase

Products: NA

Alternate protein names: 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase [H]

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MQLDLNLPAPYQPHAGLMAAFEVCPLIAILRGVTPADAADQGRALYEAGFRIIEVPLNSPHPFDSIAAIRQAVPADCIVG
AGTVLRGELVHDVKAAGGELIVMPHSDPEVVTTAKSLAMACAPGVATMTEAFVALKNGADVLKMFPAEQLGCQVVKAWRA
VLHKDVPLLPVGGIAPDNMGPFLSAGANGFGLGSALYKPGQPATTTASHAKAYINGLRIARAGVKK

Sequences:

>Translated_226_residues
MQLDLNLPAPYQPHAGLMAAFEVCPLIAILRGVTPADAADQGRALYEAGFRIIEVPLNSPHPFDSIAAIRQAVPADCIVG
AGTVLRGELVHDVKAAGGELIVMPHSDPEVVTTAKSLAMACAPGVATMTEAFVALKNGADVLKMFPAEQLGCQVVKAWRA
VLHKDVPLLPVGGIAPDNMGPFLSAGANGFGLGSALYKPGQPATTTASHAKAYINGLRIARAGVKK
>Mature_226_residues
MQLDLNLPAPYQPHAGLMAAFEVCPLIAILRGVTPADAADQGRALYEAGFRIIEVPLNSPHPFDSIAAIRQAVPADCIVG
AGTVLRGELVHDVKAAGGELIVMPHSDPEVVTTAKSLAMACAPGVATMTEAFVALKNGADVLKMFPAEQLGCQVVKAWRA
VLHKDVPLLPVGGIAPDNMGPFLSAGANGFGLGSALYKPGQPATTTASHAKAYINGLRIARAGVKK

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994954, Length=194, Percent_Identity=45.360824742268, Blast_Score=160, Evalue=8e-41,
Organism=Escherichia coli, GI1788156, Length=144, Percent_Identity=34.0277777777778, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.2.21 [H]

Molecular weight: Translated: 23376; Mature: 23376

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLDLNLPAPYQPHAGLMAAFEVCPLIAILRGVTPADAADQGRALYEAGFRIIEVPLNSP
CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCHHHHHCCCEEEEECCCCC
HPFDSIAAIRQAVPADCIVGAGTVLRGELVHDVKAAGGELIVMPHSDPEVVTTAKSLAMA
CCHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH
CAPGVATMTEAFVALKNGADVLKMFPAEQLGCQVVKAWRAVLHKDVPLLPVGGIAPDNMG
HCCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC
PFLSAGANGFGLGSALYKPGQPATTTASHAKAYINGLRIARAGVKK
CHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQLDLNLPAPYQPHAGLMAAFEVCPLIAILRGVTPADAADQGRALYEAGFRIIEVPLNSP
CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCHHHHHCCCEEEEECCCCC
HPFDSIAAIRQAVPADCIVGAGTVLRGELVHDVKAAGGELIVMPHSDPEVVTTAKSLAMA
CCHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH
CAPGVATMTEAFVALKNGADVLKMFPAEQLGCQVVKAWRAVLHKDVPLLPVGGIAPDNMG
HCCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC
PFLSAGANGFGLGSALYKPGQPATTTASHAKAYINGLRIARAGVKK
CHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]