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The map label for this gene is omlA [H]

Identifier: 186477340

GI number: 186477340

Start: 2930044

End: 2930937

Strand: Reverse

Name: omlA [H]

Synonym: Bphy_2592

Alternate gene names: 186477340

Gene position: 2930937-2930044 (Counterclockwise)

Preceding gene: 186477342

Following gene: 186477339

Centisome position: 84.24

GC content: 66.89

Gene sequence:

>894_bases
ATGATTCCAAAAGCTCTATTGATCAACCGGGGGAGCCGCATACGGCGTACCTTGATCGTCGCTGCGGCTGTGGCGGTACT
TGCTGGATGTTCCACGTATGACAGCCTGACACAGCGCGTCGCCCAAAGCATCACGCCGTACCGCATTACCGTCGTTCAGG
GGAACTTCGTGTCGAAGGAAGCGGCTGCGCAGATGCAGGTTGGCATGTCCCGCGCGCAGGTCAAGCAGGTGCTCGGCACC
CCGCTCCTGACGGACATGTTCCACGCGGACCGCTGGGACTACGTGTTCTATTTCAAGCGCGGCTCGACTTCCATCGTGCA
GCAGCGTGACTTCATCGTGAACTTCACCGGCGACCGCGTCGCGAGCTGGTCGGGCGGCGAAGATCTGCCGTCCAACCTGG
AACTGCTCGCCGATATCGACGGCGACCGCACCGGCAAGAAGAAGGCCGCTGCACCCGTCGTCGCGAGCGCAACGGGAGCG
GCCAGCGCGCCTGCTGCAACAGCGGCGCCGGCGTCCGCGGTGACACCCGACACGGTCCGCTCGGCCACGTCGGACGCCGC
GCAGGCCGGCAATCTGCCCGCCATCGATCCGAACGCGCAAGCCGCGCAGGCCGCGAACCGTCTGACCAACGCGGTGCAGG
CGCCCGCGCCGGGCACGACGCCGTCGGTGCGCGCGAACACGCCGCCGTCGAACGGTGGCGTTCCGCAAAACTCGACGGAG
CCGGGCCAGCCGCAGTTCCGCTTCACGCGTCCGCCGCCTCCGCAGATGCAGGGCGTGCCGAGCGACAACCCCGTCGGTCC
GACCGGTCCCGAAAGCAACAATGGCCAGTCGAAAGACCCGGCCTCGAAATCGACGCAATCTTCCGCACAAACGGGCACGG
GAACGGGCGGCTGA

Upstream 100 bases:

>100_bases
CCTAGAGTACAATGCGGGGTTCTAATAGTAATGTGAATTGCTGTTCAGGTCATCTTACACGGAAACACGCGCGGCTCGGT
AAGCCCGCACGGTGAGGGAA

Downstream 100 bases:

>100_bases
TTCCGTTGTCCGTAACATGATGGGCGGCCGATTCCGTCGGCCACCCATCATGCGTCTCGCAGCGACGCTCCGTCGCCGCG
ATACAGTGCCAGTTTCGTTT

Product: SmpA/OmlA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MIPKALLINRGSRIRRTLIVAAAVAVLAGCSTYDSLTQRVAQSITPYRITVVQGNFVSKEAAAQMQVGMSRAQVKQVLGT
PLLTDMFHADRWDYVFYFKRGSTSIVQQRDFIVNFTGDRVASWSGGEDLPSNLELLADIDGDRTGKKKAAAPVVASATGA
ASAPAATAAPASAVTPDTVRSATSDAAQAGNLPAIDPNAQAAQAANRLTNAVQAPAPGTTPSVRANTPPSNGGVPQNSTE
PGQPQFRFTRPPPPQMQGVPSDNPVGPTGPESNNGQSKDPASKSTQSSAQTGTGTGG

Sequences:

>Translated_297_residues
MIPKALLINRGSRIRRTLIVAAAVAVLAGCSTYDSLTQRVAQSITPYRITVVQGNFVSKEAAAQMQVGMSRAQVKQVLGT
PLLTDMFHADRWDYVFYFKRGSTSIVQQRDFIVNFTGDRVASWSGGEDLPSNLELLADIDGDRTGKKKAAAPVVASATGA
ASAPAATAAPASAVTPDTVRSATSDAAQAGNLPAIDPNAQAAQAANRLTNAVQAPAPGTTPSVRANTPPSNGGVPQNSTE
PGQPQFRFTRPPPPQMQGVPSDNPVGPTGPESNNGQSKDPASKSTQSSAQTGTGTGG
>Mature_297_residues
MIPKALLINRGSRIRRTLIVAAAVAVLAGCSTYDSLTQRVAQSITPYRITVVQGNFVSKEAAAQMQVGMSRAQVKQVLGT
PLLTDMFHADRWDYVFYFKRGSTSIVQQRDFIVNFTGDRVASWSGGEDLPSNLELLADIDGDRTGKKKAAAPVVASATGA
ASAPAATAAPASAVTPDTVRSATSDAAQAGNLPAIDPNAQAAQAANRLTNAVQAPAPGTTPSVRANTPPSNGGVPQNSTE
PGQPQFRFTRPPPPQMQGVPSDNPVGPTGPESNNGQSKDPASKSTQSSAQTGTGTGG

Specific function: May have a structural role in maintaining the cell envelope integrity [H]

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

Organism=Escherichia coli, GI87082138, Length=95, Percent_Identity=38.9473684210526, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 30650; Mature: 30650

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPKALLINRGSRIRRTLIVAAAVAVLAGCSTYDSLTQRVAQSITPYRITVVQGNFVSKE
CCCCHHEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHH
AAAQMQVGMSRAQVKQVLGTPLLTDMFHADRWDYVFYFKRGSTSIVQQRDFIVNFTGDRV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCCHHHCCCCEEEEECCCEE
ASWSGGEDLPSNLELLADIDGDRTGKKKAAAPVVASATGAASAPAATAAPASAVTPDTVR
ECCCCCCCCCCCCEEEEECCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHH
SATSDAAQAGNLPAIDPNAQAAQAANRLTNAVQAPAPGTTPSVRANTPPSNGGVPQNSTE
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGQPQFRFTRPPPPQMQGVPSDNPVGPTGPESNNGQSKDPASKSTQSSAQTGTGTGG
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIPKALLINRGSRIRRTLIVAAAVAVLAGCSTYDSLTQRVAQSITPYRITVVQGNFVSKE
CCCCHHEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHH
AAAQMQVGMSRAQVKQVLGTPLLTDMFHADRWDYVFYFKRGSTSIVQQRDFIVNFTGDRV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCCHHHCCCCEEEEECCCEE
ASWSGGEDLPSNLELLADIDGDRTGKKKAAAPVVASATGAASAPAATAAPASAVTPDTVR
ECCCCCCCCCCCCEEEEECCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHH
SATSDAAQAGNLPAIDPNAQAAQAANRLTNAVQAPAPGTTPSVRANTPPSNGGVPQNSTE
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGQPQFRFTRPPPPQMQGVPSDNPVGPTGPESNNGQSKDPASKSTQSSAQTGTGTGG
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9973334 [H]