Click here to switch to the map view.

The map label for this gene is 186477332

Identifier: 186477332

GI number: 186477332

Start: 2921186

End: 2921608

Strand: Reverse

Name: 186477332

Synonym: Bphy_2584

Alternate gene names: NA

Gene position: 2921608-2921186 (Counterclockwise)

Preceding gene: 186477333

Following gene: 186477330

Centisome position: 83.97

GC content: 58.63

Gene sequence:

>423_bases
ATGGCGATGCTGTGGATCAAGACGTTTCACATCGTTCTGGTGGCTTCGTGGTTTGCGGGTCTGTTCTACCTGCCGCGAAT
TTTTGTGAATCTGGCGATGGAGACTGATCCGGCGGCGGTGAAACGCCTGTTGCTGATGGCGCGCAAGCTGTTTCGCTTCA
TGACGCTGATCGCCGTGCCGGCGCTGGCGTGTGGATTGTGGCTTTGGCTGGTTATCGGCATCGGCAGCGGGGAGGGGTGG
ATACACGCGAAGGTCGGCGTGGTGGTGCTGCTCATCGCTTATCACGCGTATTCTGGCGTGTTGCTGCGAACCTTCGAGCG
TGGCGAGAACAAGCGCTCGCACAAGTGGTATCGGATGTTCAACGAGCTGCCCGTGCTTGGGATGCTGGCGGCGGTGGCGT
TAGTGGTAATCAAGCCATTCTGA

Upstream 100 bases:

>100_bases
GCGGGCCCGTCGGTCTCGAAGGGCTGACGTCGCTGAAGTATGTCGTGCTGGGCCACGGGGAAGGCCGTCAGTAAATTCGA
ATATCGAGAAAAACAAGATT

Downstream 100 bases:

>100_bases
TTTCCCCGTCTCGATTCGCGAAGCGCATGTAAAAAGCCCGGTTTGCTGGAAACAGCAAACCGGGCTTTGTGCTTCTGGTC
GTCGGGCGCCAGAAGCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MAMLWIKTFHIVLVASWFAGLFYLPRIFVNLAMETDPAAVKRLLLMARKLFRFMTLIAVPALACGLWLWLVIGIGSGEGW
IHAKVGVVVLLIAYHAYSGVLLRTFERGENKRSHKWYRMFNELPVLGMLAAVALVVIKPF

Sequences:

>Translated_140_residues
MAMLWIKTFHIVLVASWFAGLFYLPRIFVNLAMETDPAAVKRLLLMARKLFRFMTLIAVPALACGLWLWLVIGIGSGEGW
IHAKVGVVVLLIAYHAYSGVLLRTFERGENKRSHKWYRMFNELPVLGMLAAVALVVIKPF
>Mature_139_residues
AMLWIKTFHIVLVASWFAGLFYLPRIFVNLAMETDPAAVKRLLLMARKLFRFMTLIAVPALACGLWLWLVIGIGSGEGWI
HAKVGVVVLLIAYHAYSGVLLRTFERGENKRSHKWYRMFNELPVLGMLAAVALVVIKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR008457
- InterPro:   IPR005265 [H]

Pfam domain/function: PF05425 CopD; PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 15874; Mature: 15742

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMLWIKTFHIVLVASWFAGLFYLPRIFVNLAMETDPAAVKRLLLMARKLFRFMTLIAVP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALACGLWLWLVIGIGSGEGWIHAKVGVVVLLIAYHAYSGVLLRTFERGENKRSHKWYRMF
HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
NELPVLGMLAAVALVVIKPF
HHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AMLWIKTFHIVLVASWFAGLFYLPRIFVNLAMETDPAAVKRLLLMARKLFRFMTLIAVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALACGLWLWLVIGIGSGEGWIHAKVGVVVLLIAYHAYSGVLLRTFERGENKRSHKWYRMF
HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
NELPVLGMLAAVALVVIKPF
HHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]