| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is leuE [H]
Identifier: 186477303
GI number: 186477303
Start: 2877110
End: 2877742
Strand: Reverse
Name: leuE [H]
Synonym: Bphy_2555
Alternate gene names: 186477303
Gene position: 2877742-2877110 (Counterclockwise)
Preceding gene: 186477306
Following gene: 186477296
Centisome position: 82.71
GC content: 62.24
Gene sequence:
>633_bases ATGCTCAGTCTCACCACCTTCGCGCTGTTTTCAGGCGCTTGTGTTGCGCTCACCGCCACACCCGGCCCGGATATGTTGCT GATTGCCTCCCGCAGCGTGAGCCAAGGCAGGACGGCGGGTTTCGCGTCGCTTGCCGGGATTCTGGTTGGTACGTATTGTC ACGCTCTTGCAGCGGCGTTCGGCCTGTCACAGCTCTTTCTCGCCGCCCCGATGGCCTACGACATCGTGCGCTTCAGCGGC GCTGCCTGCCTGCTCTATCTCGCTTGGAAGACGTTCCGCTCGCAGGGCACGGTGCTGGCGCCGAACGCGTCGATGCGGCG CTTTCCCATTGACCGGATTTTCAGGCAAGGGTTGTTCACGAACCTGCTCAATCCGAAGGTAGCGCTGTTCGTGCTCGCAC TGTTTCCGCAGTTTGTGAAACCGCAGGCAGGGTCGGTTGTCGTGCAGATCATGCTGCTTGCGACCGTGCTCAACGTGATC GGCTTCGTGGTGAATGGCAGCGTGATTTTGCTTGCCAGCAGGCTGAGCGTGAAACTGACTGGCGGCGAACGCCCGCCGCG CTGGCCGCAATATTTGCTCGGCTCGGTGTTCGCCGGCCTGGCGTGTCGGCTGGCACTGGCGGGACAACGCTGA
Upstream 100 bases:
>100_bases TCGCTTCTGACAAAGTGGGAGAGCGGCTGATTGACTCGGCCTCCCTTGCTTCCTACACTCGGATCCCTTTTGGACGTTCC ATAACCCAAAGGGGTCTCGG
Downstream 100 bases:
>100_bases CGGCAAAGGCGCCTAACCTACCAACCGCCCGCGACGCACTCGCAAGCCCTTTTTCGCGAGTCCCGGTGCAATACCACCCA GTGTGCTCAATGTGCCGCCG
Product: lysine exporter protein LysE/YggA
Products: homoserine lactone [Periplasm]; Proton [Cytoplasm]; homoserine [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MLSLTTFALFSGACVALTATPGPDMLLIASRSVSQGRTAGFASLAGILVGTYCHALAAAFGLSQLFLAAPMAYDIVRFSG AACLLYLAWKTFRSQGTVLAPNASMRRFPIDRIFRQGLFTNLLNPKVALFVLALFPQFVKPQAGSVVVQIMLLATVLNVI GFVVNGSVILLASRLSVKLTGGERPPRWPQYLLGSVFAGLACRLALAGQR
Sequences:
>Translated_210_residues MLSLTTFALFSGACVALTATPGPDMLLIASRSVSQGRTAGFASLAGILVGTYCHALAAAFGLSQLFLAAPMAYDIVRFSG AACLLYLAWKTFRSQGTVLAPNASMRRFPIDRIFRQGLFTNLLNPKVALFVLALFPQFVKPQAGSVVVQIMLLATVLNVI GFVVNGSVILLASRLSVKLTGGERPPRWPQYLLGSVFAGLACRLALAGQR >Mature_210_residues MLSLTTFALFSGACVALTATPGPDMLLIASRSVSQGRTAGFASLAGILVGTYCHALAAAFGLSQLFLAAPMAYDIVRFSG AACLLYLAWKTFRSQGTVLAPNASMRRFPIDRIFRQGLFTNLLNPKVALFVLALFPQFVKPQAGSVVVQIMLLATVLNVI GFVVNGSVILLASRLSVKLTGGERPPRWPQYLLGSVFAGLACRLALAGQR
Specific function: Exporter of leucine [H]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI48994979, Length=175, Percent_Identity=29.7142857142857, Blast_Score=81, Evalue=4e-17, Organism=Escherichia coli, GI1788099, Length=185, Percent_Identity=28.1081081081081, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1786522, Length=120, Percent_Identity=31.6666666666667, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 22310; Mature: 22310
Theoretical pI: Translated: 11.41; Mature: 11.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLTTFALFSGACVALTATPGPDMLLIASRSVSQGRTAGFASLAGILVGTYCHALAAAF CCCHHHHHHHCCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GLSQLFLAAPMAYDIVRFSGAACLLYLAWKTFRSQGTVLAPNASMRRFPIDRIFRQGLFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHH NLLNPKVALFVLALFPQFVKPQAGSVVVQIMLLATVLNVIGFVVNGSVILLASRLSVKLT HHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEE GGERPPRWPQYLLGSVFAGLACRLALAGQR CCCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLSLTTFALFSGACVALTATPGPDMLLIASRSVSQGRTAGFASLAGILVGTYCHALAAAF CCCHHHHHHHCCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GLSQLFLAAPMAYDIVRFSGAACLLYLAWKTFRSQGTVLAPNASMRRFPIDRIFRQGLFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHH NLLNPKVALFVLALFPQFVKPQAGSVVVQIMLLATVLNVIGFVVNGSVILLASRLSVKLT HHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEE GGERPPRWPQYLLGSVFAGLACRLALAGQR CCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; homoserine [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + homoserine lactone [Cytoplasm] = Proton [Cytoplasm] + homoserine lactone [Periplasm] Proton [Periplasm] + homoserine [Cytoplasm] = Proton [Cytoplasm] + homoserine [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA