| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is dgk [H]
Identifier: 186477242
GI number: 186477242
Start: 2803648
End: 2804343
Strand: Direct
Name: dgk [H]
Synonym: Bphy_2493
Alternate gene names: 186477242
Gene position: 2803648-2804343 (Clockwise)
Preceding gene: 186477241
Following gene: 186477243
Centisome position: 80.58
GC content: 61.93
Gene sequence:
>696_bases ATGAACTCCTTGCCGCTGACGGCCCCGCCACTCACCGTGACGGCGCCCGACTTGCATCCACCGCACGGCTATCTGACGAT CGAAGGGCCGATCGGCGTCGGCAAGACTTCGCTTGCGCGCCGGCTCGCCCAACGCTGGTCGATGCACGAGCTGTTTGAGC GTCCGCAGGACAATCCGTTTCTCGAACGCTTCTATCGCGATACGTCGCGTCATGCGTTGCCCACGCAACTAAGCTTTGCG TTGCAACGCGCGCAGCAGACGCAGGAGATCGCCGCGCGGCGCACGGCGGGCACGCCGCTCATCACCGACTTCATGACGCA GAAGAACGATATCTTCGCGCGCCTCACGCTGGACGACGACGAGTACCAGCTGTATCGCGCACTTGCGGCGAAGCTCGACA CGCCGGGTCCGTCGCCCGATCTGATCGTCTATCTGCAGGCGAGCCCCGAAGTTCTGTTCTCGCGTATCCAGAAACGCGCG GTGCCGATGGAACTGCAGATTTCGGATGCGTACCTGCGTTCGCTGTGCGACGCGTACAACGATTTCTTCTATCACTATGA CGGCGCGCCGGTTCTCACGGTCAGCGCCGAACACCTGAACCCGCTCGAATCCGACGCGGACCTTGCTTTGCTCGTCGAAC GCATCGAAACGATGCGCGGGCGCAAGGAATTCTTTGTCAAAGGCGGCACGCTATAG
Upstream 100 bases:
>100_bases GCCTCGCGTCCAATGCGTCCAATGCGGCCAACGCGAGCGACGCAGCCGGCACGCTCGGCATGGCAGACAACGGGGACGAC GCACCCAAAGGCGGCTGCCG
Downstream 100 bases:
>100_bases CGTCCGGCTGCAGCGTGCGGCCGTATTACCAACGGACTTCCCATGACCTATTTGCAGGAGACGAGCCGCAGCGCCGTCAC CGTCCCGAAACTGATGGCGA
Product: deoxynucleoside kinase
Products: NA
Alternate protein names: DGUO kinase; dGK [H]
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MNSLPLTAPPLTVTAPDLHPPHGYLTIEGPIGVGKTSLARRLAQRWSMHELFERPQDNPFLERFYRDTSRHALPTQLSFA LQRAQQTQEIAARRTAGTPLITDFMTQKNDIFARLTLDDDEYQLYRALAAKLDTPGPSPDLIVYLQASPEVLFSRIQKRA VPMELQISDAYLRSLCDAYNDFFYHYDGAPVLTVSAEHLNPLESDADLALLVERIETMRGRKEFFVKGGTL
Sequences:
>Translated_231_residues MNSLPLTAPPLTVTAPDLHPPHGYLTIEGPIGVGKTSLARRLAQRWSMHELFERPQDNPFLERFYRDTSRHALPTQLSFA LQRAQQTQEIAARRTAGTPLITDFMTQKNDIFARLTLDDDEYQLYRALAAKLDTPGPSPDLIVYLQASPEVLFSRIQKRA VPMELQISDAYLRSLCDAYNDFFYHYDGAPVLTVSAEHLNPLESDADLALLVERIETMRGRKEFFVKGGTL >Mature_231_residues MNSLPLTAPPLTVTAPDLHPPHGYLTIEGPIGVGKTSLARRLAQRWSMHELFERPQDNPFLERFYRDTSRHALPTQLSFA LQRAQQTQEIAARRTAGTPLITDFMTQKNDIFARLTLDDDEYQLYRALAAKLDTPGPSPDLIVYLQASPEVLFSRIQKRA VPMELQISDAYLRSLCDAYNDFFYHYDGAPVLTVSAEHLNPLESDADLALLVERIETMRGRKEFFVKGGTL
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dGTP for DNA metabolism. Highly specific toward deoxyguanosine (dGuo) and deoxyinosine (dIno). Only marginal activity is observed with guanosine. UTP is slightly more efficient as ph
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.113 [H]
Molecular weight: Translated: 26147; Mature: 26147
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLPLTAPPLTVTAPDLHPPHGYLTIEGPIGVGKTSLARRLAQRWSMHELFERPQDNPF CCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHCCCCCHH LERFYRDTSRHALPTQLSFALQRAQQTQEIAARRTAGTPLITDFMTQKNDIFARLTLDDD HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEECCH EYQLYRALAAKLDTPGPSPDLIVYLQASPEVLFSRIQKRAVPMELQISDAYLRSLCDAYN HHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHH DFFYHYDGAPVLTVSAEHLNPLESDADLALLVERIETMRGRKEFFVKGGTL HHEEEECCCEEEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCHHEEEECCCC >Mature Secondary Structure MNSLPLTAPPLTVTAPDLHPPHGYLTIEGPIGVGKTSLARRLAQRWSMHELFERPQDNPF CCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHCCCCCHH LERFYRDTSRHALPTQLSFALQRAQQTQEIAARRTAGTPLITDFMTQKNDIFARLTLDDD HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEECCH EYQLYRALAAKLDTPGPSPDLIVYLQASPEVLFSRIQKRAVPMELQISDAYLRSLCDAYN HHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHH DFFYHYDGAPVLTVSAEHLNPLESDADLALLVERIETMRGRKEFFVKGGTL HHEEEECCCEEEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]