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The map label for this gene is dedA [H]

Identifier: 186477233

GI number: 186477233

Start: 2793051

End: 2793740

Strand: Reverse

Name: dedA [H]

Synonym: Bphy_2484

Alternate gene names: 186477233

Gene position: 2793740-2793051 (Counterclockwise)

Preceding gene: 186477236

Following gene: 186477228

Centisome position: 80.3

GC content: 60.58

Gene sequence:

>690_bases
TTGGACACGCTGCTGCAATTCGTCAATCTTGTCCTGCACATCGACAAGTTTCTCGGGGTCTTTATTCACCAGTACGGCGC
GTGGGTCTACGCGGTGCTGTTCCTGATCGTATTCTGCGAGACGGGTCTCGTCGTGCTGCCGTTCCTGCCGGGCGATTCGC
TGCTCTTCATCGGCGGCGCGTTTTGCGCGACGGGCGAAATGAACATCGAACTGTTGATCGTGCTGCTGCTCGGGGCGGCT
GTGCTCGGCAACACGGTGAACTACATGATCGGCCACGCGATCGGACCGAAGGTCTTCAATTCGCACATACCCGTGCTCGA
ACGGTTTCTCGATCGCGAGGCGCTGCGCAAGACACACGATTTTTACGAGCGTCACGGCGGCAAGACGATCGTGCTCGCGC
GTTTCATCCCCGTCGTGCGGACCTTTGCGCCCTTCGTCGCGGGCGCTTCGCAGATGAGCGCGAACCGCTTCCAGATCTTC
AATGTGGCGGGTGCGCTGTTCTGGGTGCTGCTGCTCACGCTGCTCGGTTTTTTCTTCGGCAATATTCCGTTCATCCGCCA
GTACCTGAACGTGATCGTGCTGGTCGGCATCGGCGCGGCCATCGTGCCCGTCGTGCTCGGCGCGCTGTGGAAAATGTTTC
GCAGCAAGCGTCAGCCGTCGGGCTCGGCGGGCAATCACACGGGCCGTTGA

Upstream 100 bases:

>100_bases
ATTTTCTGCCTACGGCGCGATTCATACCGTCATATCGCTCGCCAACCGCGCGACGGGCGATGCCCGTCACGTCAGCCATC
TGCTTTTATAAGGACGACCT

Downstream 100 bases:

>100_bases
CCCACGCAAGTCACGGGCATTCGTTCGACGCAATCGACGGATGCCCGCGCAACGAATCGAGAAGAACAAACCTCAGGTCG
CCGCGCGCCGCACGACGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MDTLLQFVNLVLHIDKFLGVFIHQYGAWVYAVLFLIVFCETGLVVLPFLPGDSLLFIGGAFCATGEMNIELLIVLLLGAA
VLGNTVNYMIGHAIGPKVFNSHIPVLERFLDREALRKTHDFYERHGGKTIVLARFIPVVRTFAPFVAGASQMSANRFQIF
NVAGALFWVLLLTLLGFFFGNIPFIRQYLNVIVLVGIGAAIVPVVLGALWKMFRSKRQPSGSAGNHTGR

Sequences:

>Translated_229_residues
MDTLLQFVNLVLHIDKFLGVFIHQYGAWVYAVLFLIVFCETGLVVLPFLPGDSLLFIGGAFCATGEMNIELLIVLLLGAA
VLGNTVNYMIGHAIGPKVFNSHIPVLERFLDREALRKTHDFYERHGGKTIVLARFIPVVRTFAPFVAGASQMSANRFQIF
NVAGALFWVLLLTLLGFFFGNIPFIRQYLNVIVLVGIGAAIVPVVLGALWKMFRSKRQPSGSAGNHTGR
>Mature_229_residues
MDTLLQFVNLVLHIDKFLGVFIHQYGAWVYAVLFLIVFCETGLVVLPFLPGDSLLFIGGAFCATGEMNIELLIVLLLGAA
VLGNTVNYMIGHAIGPKVFNSHIPVLERFLDREALRKTHDFYERHGGKTIVLARFIPVVRTFAPFVAGASQMSANRFQIF
NVAGALFWVLLLTLLGFFFGNIPFIRQYLNVIVLVGIGAAIVPVVLGALWKMFRSKRQPSGSAGNHTGR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=208, Percent_Identity=51.4423076923077, Blast_Score=213, Evalue=6e-57,
Organism=Escherichia coli, GI1789481, Length=164, Percent_Identity=39.0243902439024, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1789384, Length=169, Percent_Identity=33.7278106508876, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25279; Mature: 25279

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLLQFVNLVLHIDKFLGVFIHQYGAWVYAVLFLIVFCETGLVVLPFLPGDSLLFIGGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCH
FCATGEMNIELLIVLLLGAAVLGNTVNYMIGHAIGPKVFNSHIPVLERFLDREALRKTHD
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHH
FYERHGGKTIVLARFIPVVRTFAPFVAGASQMSANRFQIFNVAGALFWVLLLTLLGFFFG
HHHHCCCCEEHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
NIPFIRQYLNVIVLVGIGAAIVPVVLGALWKMFRSKRQPSGSAGNHTGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDTLLQFVNLVLHIDKFLGVFIHQYGAWVYAVLFLIVFCETGLVVLPFLPGDSLLFIGGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCH
FCATGEMNIELLIVLLLGAAVLGNTVNYMIGHAIGPKVFNSHIPVLERFLDREALRKTHD
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHH
FYERHGGKTIVLARFIPVVRTFAPFVAGASQMSANRFQIFNVAGALFWVLLLTLLGFFFG
HHHHCCCCEEHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
NIPFIRQYLNVIVLVGIGAAIVPVVLGALWKMFRSKRQPSGSAGNHTGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]