| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is gtaB [H]
Identifier: 186477228
GI number: 186477228
Start: 2787431
End: 2788363
Strand: Reverse
Name: gtaB [H]
Synonym: Bphy_2479
Alternate gene names: 186477228
Gene position: 2788363-2787431 (Counterclockwise)
Preceding gene: 186477233
Following gene: 186477225
Centisome position: 80.14
GC content: 62.81
Gene sequence:
>933_bases ATGCTCAGCATACGCAAGGCGGTGTTTCCCGTGGCCGGTCTCGGCACCCGATTCCTCCCGGCGACGAAGGCAAGCCCCAA AGAAATGCTGCCCGTAGTGGACAAACCGCTCATCCAGTACGCGGTCGAAGAGGCGATCGCCGCTGGCATCACCGAAATGA TCTTTGTCACGGGGCGCAGCAAGCGTGCGATCGAAGATCATTTTGACAAGTCGTATGAAGTCGAGTGCGAGCTGCTCGCG CGCGGCAAGCTTGCGTTGCTCGAACTGGTGCAGAACATTAAACCGAGCCACGTCGAATGCTGTTACGTGCGCCAGCCGGA GCCCCTCGGGCTGGGTCACGCGGTGCTCTGCGCGGAAAAACTGGTCGGCGACGAGCCGTTCGCCGTGATTCTCGCCGACG ATCTGCTCGACGGCGAGCCGCCCGTGCTTTCGCAGATGGTGAGCCTCTTCAATCACTATCACTGCTCGATCGTCGGCGTG GAGGAGATCGACAAGCAGGAATCGCGTTCGTATGGCGTGATCGACGGCAAGCGCTGGGACGACCGGTTGTTCAAGATGTC CGGCATCGTCGAAAAGCCCGCGCCGGAAGACGCGCCGTCCAATCTCGGCGTGGTGGGCCGCTACGTGCTGATGCCCGCGA TCTTCGATCGTCTGCGCCGCCAGCAGGCGGGTGCGGGCGGCGAGATCCAGCTGACGGACGCTATCCAGGCGTTGCTCGGC AGCGAGCAGGCGCTCGCGTATCAATATGTGGGCAGGCGTTTCGACTGCGGCAGCAAGCTCGGCTATCTGAAGGCGACCGT CGAGTTCGCGTTGCGTCATCCCGAGGTCAAGGACGCGTTCGATGCGTATCTGCACGAGCGTATGCAAGGTGGGCGCGCCG CGGACGGCGACGGCGTGAAGGAAGAACTGGCCGAGTTGCTGAGCCGGGTGTGA
Upstream 100 bases:
>100_bases CGAGTCTGAAATAAACGAGAAGTTGGCAGATCGGCTCGATATTCGCGGAATACGCTGGCGTATGGATGCTTATCAATCAA CTCAACGAAGAGGCGCGAGC
Downstream 100 bases:
>100_bases GCGTCGTGTTCGAGAGGGCGCGGCGGCAGAGTCTGCCGCGCTTTCCGTTGCCCAAGCGTTACCGCACGCGTGCGGCTCAG CGGAAGTAGGCCTTGGTGTT
Product: UTP-glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; General stress protein 33; GSP33; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MLSIRKAVFPVAGLGTRFLPATKASPKEMLPVVDKPLIQYAVEEAIAAGITEMIFVTGRSKRAIEDHFDKSYEVECELLA RGKLALLELVQNIKPSHVECCYVRQPEPLGLGHAVLCAEKLVGDEPFAVILADDLLDGEPPVLSQMVSLFNHYHCSIVGV EEIDKQESRSYGVIDGKRWDDRLFKMSGIVEKPAPEDAPSNLGVVGRYVLMPAIFDRLRRQQAGAGGEIQLTDAIQALLG SEQALAYQYVGRRFDCGSKLGYLKATVEFALRHPEVKDAFDAYLHERMQGGRAADGDGVKEELAELLSRV
Sequences:
>Translated_310_residues MLSIRKAVFPVAGLGTRFLPATKASPKEMLPVVDKPLIQYAVEEAIAAGITEMIFVTGRSKRAIEDHFDKSYEVECELLA RGKLALLELVQNIKPSHVECCYVRQPEPLGLGHAVLCAEKLVGDEPFAVILADDLLDGEPPVLSQMVSLFNHYHCSIVGV EEIDKQESRSYGVIDGKRWDDRLFKMSGIVEKPAPEDAPSNLGVVGRYVLMPAIFDRLRRQQAGAGGEIQLTDAIQALLG SEQALAYQYVGRRFDCGSKLGYLKATVEFALRHPEVKDAFDAYLHERMQGGRAADGDGVKEELAELLSRV >Mature_310_residues MLSIRKAVFPVAGLGTRFLPATKASPKEMLPVVDKPLIQYAVEEAIAAGITEMIFVTGRSKRAIEDHFDKSYEVECELLA RGKLALLELVQNIKPSHVECCYVRQPEPLGLGHAVLCAEKLVGDEPFAVILADDLLDGEPPVLSQMVSLFNHYHCSIVGV EEIDKQESRSYGVIDGKRWDDRLFKMSGIVEKPAPEDAPSNLGVVGRYVLMPAIFDRLRRQQAGAGGEIQLTDAIQALLG SEQALAYQYVGRRFDCGSKLGYLKATVEFALRHPEVKDAFDAYLHERMQGGRAADGDGVKEELAELLSRV
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used as a membr
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=293, Percent_Identity=51.877133105802, Blast_Score=267, Evalue=5e-73, Organism=Escherichia coli, GI1788355, Length=277, Percent_Identity=48.7364620938628, Blast_Score=226, Evalue=2e-60, Organism=Escherichia coli, GI1790224, Length=307, Percent_Identity=24.7557003257329, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1788351, Length=269, Percent_Identity=24.907063197026, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 34140; Mature: 34140
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSIRKAVFPVAGLGTRFLPATKASPKEMLPVVDKPLIQYAVEEAIAAGITEMIFVTGRS CCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC KRAIEDHFDKSYEVECELLARGKLALLELVQNIKPSHVECCYVRQPEPLGLGHAVLCAEK CHHHHHHCCCCCCEEEHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHH LVGDEPFAVILADDLLDGEPPVLSQMVSLFNHYHCSIVGVEEIDKQESRSYGVIDGKRWD HCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCHH DRLFKMSGIVEKPAPEDAPSNLGVVGRYVLMPAIFDRLRRQQAGAGGEIQLTDAIQALLG HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHC SEQALAYQYVGRRFDCGSKLGYLKATVEFALRHPEVKDAFDAYLHERMQGGRAADGDGVK CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHH EELAELLSRV HHHHHHHHCC >Mature Secondary Structure MLSIRKAVFPVAGLGTRFLPATKASPKEMLPVVDKPLIQYAVEEAIAAGITEMIFVTGRS CCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC KRAIEDHFDKSYEVECELLARGKLALLELVQNIKPSHVECCYVRQPEPLGLGHAVLCAEK CHHHHHHCCCCCCEEEHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHH LVGDEPFAVILADDLLDGEPPVLSQMVSLFNHYHCSIVGVEEIDKQESRSYGVIDGKRWD HCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCHH DRLFKMSGIVEKPAPEDAPSNLGVVGRYVLMPAIFDRLRRQQAGAGGEIQLTDAIQALLG HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHC SEQALAYQYVGRRFDCGSKLGYLKATVEFALRHPEVKDAFDAYLHERMQGGRAADGDGVK CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHH EELAELLSRV HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8320212; 8126437; 9384377; 9298659 [H]