| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477226
Identifier: 186477226
GI number: 186477226
Start: 2784120
End: 2786411
Strand: Direct
Name: 186477226
Synonym: Bphy_2477
Alternate gene names: NA
Gene position: 2784120-2786411 (Clockwise)
Preceding gene: 186477216
Following gene: 186477227
Centisome position: 80.02
GC content: 64.05
Gene sequence:
>2292_bases ATGACTGATGCAGACAAGGGTCTCGGTAGAACATATGCATCGGGTGCGCAGTTACAACTCGGGCGTCATACGTCGCTAGC GCTACGAGCCTGGATGCTCGCGCTAGGCGTCGCGATGACAAGTGGCTGTGACAACGCATCTGCCGATAACGACCCCGCCG CAAAGCGGACGGACAGCTGGACGAAATGCGCGGACGAACGCGGCGCATGCAGCTTCATCGGCACGCGCGACGTGCGCTAC GGCAGCGAGTCGCATAACACCGTCAAGTCGCTGACGAACGGCACACCGTGCAATAACGCGATATTCGGCGATCCGGCGCC CGGCGAACTCAAGCAATGCTGGATTGCGGGCCCGAACGACGAAGCCGCCCCTACCGCTTCAGCCAAAGCGACGGACAAGG CGCCCCCAGCGCCGGCGCGCGCTTCCTCCGACGACAACGACTGGCCGATGAAAGCGCCCCCTCGTATGAACGATTCTCAA GCACTCCGCTGCAGCAAGCCAGTCGAGACGGCGGCCGCTAACCCGCAGGGCGATCCTGTCGAAGCGGACACGCCGGGCAG CGATGGCACGCGCCTCTTTCCGCGCGATCGTTCGTTCCAGATCGTCATCACCACACGCGCAACGCGAGACGACAGGCTCG CCTGGAAGATCCGCGATGCGTGGGGCACCGTGCAGGCAAGCGGCACGTATGGCGTCGCGAAAGGCGCGCGTCAGATGAAA CTGAATTGCGAGTCTTCGTTAGCCGGCTACTTTGCATTGTCGGCGTCGCTCGAAGAGACGCATGTCCAACTGCCCGCACG CGGCACGCGTCCTCAAGGCATCGCGACCTTCGGCGTGCTGCCCGACGTCTCGGCGAGCGTGCCGCCCGTGCATTTCGCAC ACGCCGACCTGCATCGGTTCGGCGGCCAGGGCGGTGCGTTCGTCGCTCCCGGCGAGCGCTGCTGCGATGGCGACGGGTAT CGGCCGATGTACACGCAGCTGGGCCTGACATGGGTGAACGACAACCGCAACTGGTACGAGGAAGAGCCTGACCGCCCGGG CACCTTCAGTCCCGCCACACGGCAGCTCGCGTCGTGGTTCCGCAAGGGCGACCTGCTGCGGCTGATCCAGCTCGATGGCA TTCCTGGCTGGGCAAGCCCGACTGGCAAGCAGACGCATAGCTATCTGCCGAAATCAACGAGCGCGCTGCGCGAATACATG CAGCGCGTCGGCACGGAATCGAGCCGCGTTCGCAGCACGGTCTTTCCGACGCAACAGAGCAACTACTACCAGGTGACGTG GGAACCCGATGCGGCAGGCGGCCTGCCGTGGCGCGACACGGATGCGAATTTCGTCGAACTTTACAAAGCGGTGCATGAAG GCATTCATGCGACCGATCCGAATGCCGTCGTGATGGGACCGACGTATGGCTCGGTGGTGGGCAACGTCGAATGGCTCAAG CGCCTTGCGCCGCTCGGGCTCGCGAAGTATGTCGACGGGATCGCGATTCACGGCTACTACGATCCCGGCGGCAACAGTCC GTCGCACCCGCCTGAGCGGCTGATGAATGCCAGCGATCCGCAACAGGCGCAATATGCGCTGCCGACCGCGATGCGCGCCC TGCGCCGCGTGATGGCCGAGCAGTACAAGCCCGGCGCGAAACTGTTCGCGACGGAGACGGGAATCAGCTACGACGTCGGC GAGGAATACGGGCCGCACTATCCGCCCAACGACGTGCTGTACGCGCAAGGCGCCGTCGTCGCGCGCACGCATCTGATCCT GCTCGGCGAAGGCGCGGACATGACCTACATCTTCTACTCGAACGACTCGCCTGCCGCGACACCAGGGTATGGCGTGTTCT TCGATCTCGATCATCCGAAAGGCGCATTCGGGCCCAATACGGTAAGCCCGAAGCCTGCTGCATCCGCGATCGTCGCGATG ACGCGCCTGATCGACGGTACCGCGACGCTCGGCCCCATCAAGCGCACGCCGGCGGGCGTCTACGCGTACGCGTTCCAGCG TCTGAACAACGGAAAACTGATCACGGCCGCCTGGACGCACGACAACGCGAAGTGGAACAAGTCGACCCACTTCGATCCGA CAGCAGGCGTGACATGGCGTCTGCAGGTCGACGCGCCGGGCACGTCAGGCAAGGTGACGGTGTTCGACATGATGGGCAAT CCGTCGAGCCTGCCCTACGAAGACGGCCATGTAACGCTCGCGCTAACGGAGACGCCTGTATATGTTGTGTCGTCGAATGC GGCCGTGATGAAGGCCAACGTGACGACGCCTGCGGGCTATGTCGCCCCCTGA
Upstream 100 bases:
>100_bases GTCCATAGGCTAGCAAAGGTCGAATTTCTGCTACGCCGGCGGTGTAATCTGGGTCGCTCGAAAGGCGCCAGGCCGGTCAT CCGTACCGCGGGGAGAAAAA
Downstream 100 bases:
>100_bases CGAAGCGGCCTTGTCGATGGATTGCCTTTTCCTGAGCCCACCCTTCACACAGCGCGTGCTCATCTGTCGCGAATTGGCTA TACGAGACGGGATTTAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 763; Mature: 762
Protein sequence:
>763_residues MTDADKGLGRTYASGAQLQLGRHTSLALRAWMLALGVAMTSGCDNASADNDPAAKRTDSWTKCADERGACSFIGTRDVRY GSESHNTVKSLTNGTPCNNAIFGDPAPGELKQCWIAGPNDEAAPTASAKATDKAPPAPARASSDDNDWPMKAPPRMNDSQ ALRCSKPVETAAANPQGDPVEADTPGSDGTRLFPRDRSFQIVITTRATRDDRLAWKIRDAWGTVQASGTYGVAKGARQMK LNCESSLAGYFALSASLEETHVQLPARGTRPQGIATFGVLPDVSASVPPVHFAHADLHRFGGQGGAFVAPGERCCDGDGY RPMYTQLGLTWVNDNRNWYEEEPDRPGTFSPATRQLASWFRKGDLLRLIQLDGIPGWASPTGKQTHSYLPKSTSALREYM QRVGTESSRVRSTVFPTQQSNYYQVTWEPDAAGGLPWRDTDANFVELYKAVHEGIHATDPNAVVMGPTYGSVVGNVEWLK RLAPLGLAKYVDGIAIHGYYDPGGNSPSHPPERLMNASDPQQAQYALPTAMRALRRVMAEQYKPGAKLFATETGISYDVG EEYGPHYPPNDVLYAQGAVVARTHLILLGEGADMTYIFYSNDSPAATPGYGVFFDLDHPKGAFGPNTVSPKPAASAIVAM TRLIDGTATLGPIKRTPAGVYAYAFQRLNNGKLITAAWTHDNAKWNKSTHFDPTAGVTWRLQVDAPGTSGKVTVFDMMGN PSSLPYEDGHVTLALTETPVYVVSSNAAVMKANVTTPAGYVAP
Sequences:
>Translated_763_residues MTDADKGLGRTYASGAQLQLGRHTSLALRAWMLALGVAMTSGCDNASADNDPAAKRTDSWTKCADERGACSFIGTRDVRY GSESHNTVKSLTNGTPCNNAIFGDPAPGELKQCWIAGPNDEAAPTASAKATDKAPPAPARASSDDNDWPMKAPPRMNDSQ ALRCSKPVETAAANPQGDPVEADTPGSDGTRLFPRDRSFQIVITTRATRDDRLAWKIRDAWGTVQASGTYGVAKGARQMK LNCESSLAGYFALSASLEETHVQLPARGTRPQGIATFGVLPDVSASVPPVHFAHADLHRFGGQGGAFVAPGERCCDGDGY RPMYTQLGLTWVNDNRNWYEEEPDRPGTFSPATRQLASWFRKGDLLRLIQLDGIPGWASPTGKQTHSYLPKSTSALREYM QRVGTESSRVRSTVFPTQQSNYYQVTWEPDAAGGLPWRDTDANFVELYKAVHEGIHATDPNAVVMGPTYGSVVGNVEWLK RLAPLGLAKYVDGIAIHGYYDPGGNSPSHPPERLMNASDPQQAQYALPTAMRALRRVMAEQYKPGAKLFATETGISYDVG EEYGPHYPPNDVLYAQGAVVARTHLILLGEGADMTYIFYSNDSPAATPGYGVFFDLDHPKGAFGPNTVSPKPAASAIVAM TRLIDGTATLGPIKRTPAGVYAYAFQRLNNGKLITAAWTHDNAKWNKSTHFDPTAGVTWRLQVDAPGTSGKVTVFDMMGN PSSLPYEDGHVTLALTETPVYVVSSNAAVMKANVTTPAGYVAP >Mature_762_residues TDADKGLGRTYASGAQLQLGRHTSLALRAWMLALGVAMTSGCDNASADNDPAAKRTDSWTKCADERGACSFIGTRDVRYG SESHNTVKSLTNGTPCNNAIFGDPAPGELKQCWIAGPNDEAAPTASAKATDKAPPAPARASSDDNDWPMKAPPRMNDSQA LRCSKPVETAAANPQGDPVEADTPGSDGTRLFPRDRSFQIVITTRATRDDRLAWKIRDAWGTVQASGTYGVAKGARQMKL NCESSLAGYFALSASLEETHVQLPARGTRPQGIATFGVLPDVSASVPPVHFAHADLHRFGGQGGAFVAPGERCCDGDGYR PMYTQLGLTWVNDNRNWYEEEPDRPGTFSPATRQLASWFRKGDLLRLIQLDGIPGWASPTGKQTHSYLPKSTSALREYMQ RVGTESSRVRSTVFPTQQSNYYQVTWEPDAAGGLPWRDTDANFVELYKAVHEGIHATDPNAVVMGPTYGSVVGNVEWLKR LAPLGLAKYVDGIAIHGYYDPGGNSPSHPPERLMNASDPQQAQYALPTAMRALRRVMAEQYKPGAKLFATETGISYDVGE EYGPHYPPNDVLYAQGAVVARTHLILLGEGADMTYIFYSNDSPAATPGYGVFFDLDHPKGAFGPNTVSPKPAASAIVAMT RLIDGTATLGPIKRTPAGVYAYAFQRLNNGKLITAAWTHDNAKWNKSTHFDPTAGVTWRLQVDAPGTSGKVTVFDMMGNP SSLPYEDGHVTLALTETPVYVVSSNAAVMKANVTTPAGYVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82084; Mature: 81953
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDADKGLGRTYASGAQLQLGRHTSLALRAWMLALGVAMTSGCDNASADNDPAAKRTDSW CCCCCCCCCCHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH TKCADERGACSFIGTRDVRYGSESHNTVKSLTNGTPCNNAIFGDPAPGELKQCWIAGPND HHHHCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHEEEEECCCC EAAPTASAKATDKAPPAPARASSDDNDWPMKAPPRMNDSQALRCSKPVETAAANPQGDPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHCCCCCCCCC EADTPGSDGTRLFPRDRSFQIVITTRATRDDRLAWKIRDAWGTVQASGTYGVAKGARQMK CCCCCCCCCCEECCCCCCEEEEEEEECCCCCCEEEEEECCCCEEEECCCCHHHCCCEEEE LNCESSLAGYFALSASLEETHVQLPARGTRPQGIATFGVLPDVSASVPPVHFAHADLHRF ECCCCCCCEEEEEECCCCHHEEECCCCCCCCCCEEEECCCCCCCCCCCCEEEHHHHHHHH GGQGGAFVAPGERCCDGDGYRPMYTQLGLTWVNDNRNWYEEEPDRPGTFSPATRQLASWF CCCCCEEECCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH RKGDLLRLIQLDGIPGWASPTGKQTHSYLPKSTSALREYMQRVGTESSRVRSTVFPTQQS HCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHEECCCCCC NYYQVTWEPDAAGGLPWRDTDANFVELYKAVHEGIHATDPNAVVMGPTYGSVVGNVEWLK CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHCCHHHHH RLAPLGLAKYVDGIAIHGYYDPGGNSPSHPPERLMNASDPQQAQYALPTAMRALRRVMAE HHHCCHHHHHHCCEEEEEEECCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH QYKPGAKLFATETGISYDVGEEYGPHYPPNDVLYAQGAVVARTHLILLGEGADMTYIFYS HCCCCCEEEEECCCCCCCCCHHCCCCCCCCCEEEECCCEEEEEEEEEEECCCCEEEEEEC NDSPAATPGYGVFFDLDHPKGAFGPNTVSPKPAASAIVAMTRLIDGTATLGPIKRTPAGV CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHH YAYAFQRLNNGKLITAAWTHDNAKWNKSTHFDPTAGVTWRLQVDAPGTSGKVTVFDMMGN HHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCC PSSLPYEDGHVTLALTETPVYVVSSNAAVMKANVTTPAGYVAP CCCCCCCCCEEEEEEECCCEEEEECCCEEEEEECCCCCCCCCC >Mature Secondary Structure TDADKGLGRTYASGAQLQLGRHTSLALRAWMLALGVAMTSGCDNASADNDPAAKRTDSW CCCCCCCCCHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH TKCADERGACSFIGTRDVRYGSESHNTVKSLTNGTPCNNAIFGDPAPGELKQCWIAGPND HHHHCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHEEEEECCCC EAAPTASAKATDKAPPAPARASSDDNDWPMKAPPRMNDSQALRCSKPVETAAANPQGDPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHCCCCCCCCC EADTPGSDGTRLFPRDRSFQIVITTRATRDDRLAWKIRDAWGTVQASGTYGVAKGARQMK CCCCCCCCCCEECCCCCCEEEEEEEECCCCCCEEEEEECCCCEEEECCCCHHHCCCEEEE LNCESSLAGYFALSASLEETHVQLPARGTRPQGIATFGVLPDVSASVPPVHFAHADLHRF ECCCCCCCEEEEEECCCCHHEEECCCCCCCCCCEEEECCCCCCCCCCCCEEEHHHHHHHH GGQGGAFVAPGERCCDGDGYRPMYTQLGLTWVNDNRNWYEEEPDRPGTFSPATRQLASWF CCCCCEEECCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH RKGDLLRLIQLDGIPGWASPTGKQTHSYLPKSTSALREYMQRVGTESSRVRSTVFPTQQS HCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHEECCCCCC NYYQVTWEPDAAGGLPWRDTDANFVELYKAVHEGIHATDPNAVVMGPTYGSVVGNVEWLK CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHCCHHHHH RLAPLGLAKYVDGIAIHGYYDPGGNSPSHPPERLMNASDPQQAQYALPTAMRALRRVMAE HHHCCHHHHHHCCEEEEEEECCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH QYKPGAKLFATETGISYDVGEEYGPHYPPNDVLYAQGAVVARTHLILLGEGADMTYIFYS HCCCCCEEEEECCCCCCCCCHHCCCCCCCCCEEEECCCEEEEEEEEEEECCCCEEEEEEC NDSPAATPGYGVFFDLDHPKGAFGPNTVSPKPAASAIVAMTRLIDGTATLGPIKRTPAGV CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHH YAYAFQRLNNGKLITAAWTHDNAKWNKSTHFDPTAGVTWRLQVDAPGTSGKVTVFDMMGN HHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCC PSSLPYEDGHVTLALTETPVYVVSSNAAVMKANVTTPAGYVAP CCCCCCCCCEEEEEEECCCEEEEECCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA