| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is epsB [H]
Identifier: 186477221
GI number: 186477221
Start: 2775691
End: 2777916
Strand: Reverse
Name: epsB [H]
Synonym: Bphy_2472
Alternate gene names: 186477221
Gene position: 2777916-2775691 (Counterclockwise)
Preceding gene: 186477222
Following gene: 186477220
Centisome position: 79.84
GC content: 64.51
Gene sequence:
>2226_bases ATGGCTATCAACTTTGACAATCGCTATACGGACGTCAGTTCGGACGAGATGCATCTGACGGATTATCTGCAGGCCATCGT CGCGAACTGGCGCTCGATTCTGCTGATTACGCTGGCCGTCACGGCACTGGGGACCGCCTACGCCTTCCTTGCGACGCCCG TCTACCGTGCGGACGTTCTGTTCCATGTGGTCGACAAGTCCGAAAACAACAACAAGCAGGACGGCCTCCAGCCCCTCACG GGGATGTTCGACACGAAGCCCTCCACGGCGGCCGAAATCGAGCTGATGAAGTCGCGGCTCGTGACGGAAGAGACCGTCAA GCAGCTGCACCTCGATATCGCCGCGCGGCCGCATACGCTGCCTTTCGTCGGCGGGCTGCTGGCGCCGCTGATGAGCGGCA AGTGGGGCATCAAGCTGCCGCCGTCGCTGCAGCTGCCGAGCTACGCGTGGGGCAACGAGAGCATCAAGGTGTCGCGCTTC GACACCGCCAAGGACATGTACGACAAGGACTTCACGCTGATTGCCGGCCAGAACGGCGACTTCGTGCTGAACAACCCGGA CGGGGTCGCGATTCTCGAAGGCAAGGTCGGCGAAAACGTCGTGCGCGAAACGCCGGCTGGCCCGATCGCGCTGCGTGTCG ACGAGATCGTCGGCGCGCCGGGCACGCGCTACGAGCTGACGCGTGCGTCAACGCTGACGACCGTCGAGCGTTTGCAAAAG GCGATGGATATCGGCGAGTCGACGCTGCAGTCGGGTGTGATCCGCGCGAGCCTCGAGGGCCAGAATCCGAAGCTCACGGC CGACATCATGAACAGCATGGCGCGCGAGTTCATCCGCCAGGATGTCGAAAGCCGTTCGTCGGAGGCCGAGCACATGCTGG CGTTCCTCGACCAGCAGCTGCCGCAGCTGCGCAAGGAACTGGACGCCGCCGAGCAGCGCTACAACACGTTCCGCAACCAG CACGGCACCGTCGATCTGAGCGAAGAAAGCCGGCTGCTGCTGCAGCAGATCGTCGACAACAAGACCAAGCTCGTCGACCT GCAGACGCAGCGCGCGGAGATGTCACAGCGCTTCACCGCCAATCACCCCGCCGTGGCCGCGCTCGACGCGCAGATCGCTT CGCTGCAGGGCAATCTGTCGAAGATGGGCAAGAGTGTGCAGACGCTGCCCGACACCGAACAGACGGCGCTGCGTCTGTTG CGCGACGTGCACGTCGACACCGAGCTCTACACGAACCTGCTCAACAGCGCGCAGCAGCTGCGCATCGCCAAGGCAGGCCA GGTGGGCGACGTGCGGATCGTCGACTTCGCCGAAGCCGCCGACGACCCCGTGCGTCCGAAGCGCCTGATGGTGATCCTGA TCAGCTTCGGCTCGGGTCTGTTCATCGGCATCGTGTTCGCCTTCGTGCGCAAGACGCTGTACGGCGGTGTCGAACGTCCG GACGAGCTGGAATCCGCACTCGGCGTGCCCGTCTTCGCCGTGGTGCCGCGCAGCGAGCAGCAGATCCGCCTGCAGCAGGA CGTGATGATGCGCCGGCGCGGCCTGCACGTGCTCGCCGAACAGGCGCCGCAGGACATCGCGGTGGAAGGCGTGCGCAACC TGCGCACCTCGCTGCAGCTGACGGTCGACGACAAGCAGAACAACGTCGTGATGCTGACGGGCTCGCGCCCGGATGCCGGC AAGTCGTTCCTGTCGGTGAATCTGTCGGCGCTCGTCGCGTCGACGGCCAAGCGCACACTGGTGATCGACGGCGACATGCG GCGGGGCGACGTGCACTCGCACTTCGGCCTGCAGCACCAGCCGGGTCTTTCCGACGTGCTGCGCGGCGGCGATCTGCAGT CGTCGATCCAGCGCGAAGTGCTGCCCGGCCTCGACGTGCTGACCAAGGGCTCGCTGCCCTCGCATCCTTCCGAACTGCTG ATGAGCAAGCGCTTCGAAACGATGCTCGAGGAACTCAAGAACCAGTACGACCTGATCATCATCGATACGCCGCCCGTGCT CGCCGTCACCGATTCGACCGTGATCGGCAAGCACGTGGGGACGACGTTGCTCGTGATTCGTCACGGCCGCCATCCGGTGA GCGAACTCGCGGAAACTGCGAAGCGCTTGCGTAACGGCGGCGTGAATTTGCAGGGGGTGTTGTTGACCGACGTACCGCAG GCGGGCGCGTTCATCGGCTCGGGTTATCGAGGCGGCTACTACGGCTACGAGAGTATCGCAGGCTGA
Upstream 100 bases:
>100_bases CGAAGTAGTAAGCGGCGGGGCATGCGTTGCGCGCTTTGCATCAGCGGGGATAAGGGCGCGCAACGCTCTCAAGAGTGTTG GTCTTTGATGGATCACGCAA
Downstream 100 bases:
>100_bases CAGCAGCGCATGTCCGGCAGGGCGGCAAGGGAGCACCCGCGGACATCTACACGAACTGGTGCAAGGGCTGGGGGCCGCGC ACAGGCCACAACCCGGCCGA
Product: exopolysaccharide transport protein family
Products: ADP; protein tyrosine phosphate [C]
Alternate protein names: EPS I polysaccharide export protein epsB [H]
Number of amino acids: Translated: 741; Mature: 740
Protein sequence:
>741_residues MAINFDNRYTDVSSDEMHLTDYLQAIVANWRSILLITLAVTALGTAYAFLATPVYRADVLFHVVDKSENNNKQDGLQPLT GMFDTKPSTAAEIELMKSRLVTEETVKQLHLDIAARPHTLPFVGGLLAPLMSGKWGIKLPPSLQLPSYAWGNESIKVSRF DTAKDMYDKDFTLIAGQNGDFVLNNPDGVAILEGKVGENVVRETPAGPIALRVDEIVGAPGTRYELTRASTLTTVERLQK AMDIGESTLQSGVIRASLEGQNPKLTADIMNSMAREFIRQDVESRSSEAEHMLAFLDQQLPQLRKELDAAEQRYNTFRNQ HGTVDLSEESRLLLQQIVDNKTKLVDLQTQRAEMSQRFTANHPAVAALDAQIASLQGNLSKMGKSVQTLPDTEQTALRLL RDVHVDTELYTNLLNSAQQLRIAKAGQVGDVRIVDFAEAADDPVRPKRLMVILISFGSGLFIGIVFAFVRKTLYGGVERP DELESALGVPVFAVVPRSEQQIRLQQDVMMRRRGLHVLAEQAPQDIAVEGVRNLRTSLQLTVDDKQNNVVMLTGSRPDAG KSFLSVNLSALVASTAKRTLVIDGDMRRGDVHSHFGLQHQPGLSDVLRGGDLQSSIQREVLPGLDVLTKGSLPSHPSELL MSKRFETMLEELKNQYDLIIIDTPPVLAVTDSTVIGKHVGTTLLVIRHGRHPVSELAETAKRLRNGGVNLQGVLLTDVPQ AGAFIGSGYRGGYYGYESIAG
Sequences:
>Translated_741_residues MAINFDNRYTDVSSDEMHLTDYLQAIVANWRSILLITLAVTALGTAYAFLATPVYRADVLFHVVDKSENNNKQDGLQPLT GMFDTKPSTAAEIELMKSRLVTEETVKQLHLDIAARPHTLPFVGGLLAPLMSGKWGIKLPPSLQLPSYAWGNESIKVSRF DTAKDMYDKDFTLIAGQNGDFVLNNPDGVAILEGKVGENVVRETPAGPIALRVDEIVGAPGTRYELTRASTLTTVERLQK AMDIGESTLQSGVIRASLEGQNPKLTADIMNSMAREFIRQDVESRSSEAEHMLAFLDQQLPQLRKELDAAEQRYNTFRNQ HGTVDLSEESRLLLQQIVDNKTKLVDLQTQRAEMSQRFTANHPAVAALDAQIASLQGNLSKMGKSVQTLPDTEQTALRLL RDVHVDTELYTNLLNSAQQLRIAKAGQVGDVRIVDFAEAADDPVRPKRLMVILISFGSGLFIGIVFAFVRKTLYGGVERP DELESALGVPVFAVVPRSEQQIRLQQDVMMRRRGLHVLAEQAPQDIAVEGVRNLRTSLQLTVDDKQNNVVMLTGSRPDAG KSFLSVNLSALVASTAKRTLVIDGDMRRGDVHSHFGLQHQPGLSDVLRGGDLQSSIQREVLPGLDVLTKGSLPSHPSELL MSKRFETMLEELKNQYDLIIIDTPPVLAVTDSTVIGKHVGTTLLVIRHGRHPVSELAETAKRLRNGGVNLQGVLLTDVPQ AGAFIGSGYRGGYYGYESIAG >Mature_740_residues AINFDNRYTDVSSDEMHLTDYLQAIVANWRSILLITLAVTALGTAYAFLATPVYRADVLFHVVDKSENNNKQDGLQPLTG MFDTKPSTAAEIELMKSRLVTEETVKQLHLDIAARPHTLPFVGGLLAPLMSGKWGIKLPPSLQLPSYAWGNESIKVSRFD TAKDMYDKDFTLIAGQNGDFVLNNPDGVAILEGKVGENVVRETPAGPIALRVDEIVGAPGTRYELTRASTLTTVERLQKA MDIGESTLQSGVIRASLEGQNPKLTADIMNSMAREFIRQDVESRSSEAEHMLAFLDQQLPQLRKELDAAEQRYNTFRNQH GTVDLSEESRLLLQQIVDNKTKLVDLQTQRAEMSQRFTANHPAVAALDAQIASLQGNLSKMGKSVQTLPDTEQTALRLLR DVHVDTELYTNLLNSAQQLRIAKAGQVGDVRIVDFAEAADDPVRPKRLMVILISFGSGLFIGIVFAFVRKTLYGGVERPD ELESALGVPVFAVVPRSEQQIRLQQDVMMRRRGLHVLAEQAPQDIAVEGVRNLRTSLQLTVDDKQNNVVMLTGSRPDAGK SFLSVNLSALVASTAKRTLVIDGDMRRGDVHSHFGLQHQPGLSDVLRGGDLQSSIQREVLPGLDVLTKGSLPSHPSELLM SKRFETMLEELKNQYDLIIIDTPPVLAVTDSTVIGKHVGTTLLVIRHGRHPVSELAETAKRLRNGGVNLQGVLLTDVPQA GAFIGSGYRGGYYGYESIAG
Specific function: Probably involved in polymerization and/or export of exopolysaccharide EPS I which functions as a virulence factor. May be involved in an ATP-dependent process in the pathway for EPS I production, possibly export of the trimeric repeat units across the in
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the etk/wzc family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=733, Percent_Identity=35.6070941336971, Blast_Score=440, Evalue=1e-124, Organism=Escherichia coli, GI1787216, Length=725, Percent_Identity=34.2068965517241, Blast_Score=425, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR005700 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: 2.7.1.112 [C]
Molecular weight: Translated: 81390; Mature: 81259
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAINFDNRYTDVSSDEMHLTDYLQAIVANWRSILLITLAVTALGTAYAFLATPVYRADVL CEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH FHVVDKSENNNKQDGLQPLTGMFDTKPSTAAEIELMKSRLVTEETVKQLHLDIAARPHTL EEEECCCCCCCCHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PFVGGLLAPLMSGKWGIKLPPSLQLPSYAWGNESIKVSRFDTAKDMYDKDFTLIAGQNGD HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCEEEEECCCCC FVLNNPDGVAILEGKVGENVVRETPAGPIALRVDEIVGAPGTRYELTRASTLTTVERLQK EEEECCCCEEEEECCCCCHHHHHCCCCCEEEEEHHHHCCCCCCEEEHHHHHHHHHHHHHH AMDIGESTLQSGVIRASLEGQNPKLTADIMNSMAREFIRQDVESRSSEAEHMLAFLDQQL HHHCCHHHHHCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PQLRKELDAAEQRYNTFRNQHGTVDLSEESRLLLQQIVDNKTKLVDLQTQRAEMSQRFTA HHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCC NHPAVAALDAQIASLQGNLSKMGKSVQTLPDTEQTALRLLRDVHVDTELYTNLLNSAQQL CCCCEEHHHHHHHHHCCCHHHHCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH RIAKAGQVGDVRIVDFAEAADDPVRPKRLMVILISFGSGLFIGIVFAFVRKTLYGGVERP HHHCCCCCCCEEEEEEHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCH DELESALGVPVFAVVPRSEQQIRLQQDVMMRRRGLHVLAEQAPQDIAVEGVRNLRTSLQL HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHCEEEE TVDDKQNNVVMLTGSRPDAGKSFLSVNLSALVASTAKRTLVIDGDMRRGDVHSHFGLQHQ EEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCCC PGLSDVLRGGDLQSSIQREVLPGLDVLTKGSLPSHPSELLMSKRFETMLEELKNQYDLII CCHHHHHCCCCHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE IDTPPVLAVTDSTVIGKHVGTTLLVIRHGRHPVSELAETAKRLRNGGVNLQGVLLTDVPQ ECCCCEEEEECCHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCC AGAFIGSGYRGGYYGYESIAG CCCEECCCCCCCCCCHHHCCC >Mature Secondary Structure AINFDNRYTDVSSDEMHLTDYLQAIVANWRSILLITLAVTALGTAYAFLATPVYRADVL EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH FHVVDKSENNNKQDGLQPLTGMFDTKPSTAAEIELMKSRLVTEETVKQLHLDIAARPHTL EEEECCCCCCCCHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PFVGGLLAPLMSGKWGIKLPPSLQLPSYAWGNESIKVSRFDTAKDMYDKDFTLIAGQNGD HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCEEEEECCCCC FVLNNPDGVAILEGKVGENVVRETPAGPIALRVDEIVGAPGTRYELTRASTLTTVERLQK EEEECCCCEEEEECCCCCHHHHHCCCCCEEEEEHHHHCCCCCCEEEHHHHHHHHHHHHHH AMDIGESTLQSGVIRASLEGQNPKLTADIMNSMAREFIRQDVESRSSEAEHMLAFLDQQL HHHCCHHHHHCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PQLRKELDAAEQRYNTFRNQHGTVDLSEESRLLLQQIVDNKTKLVDLQTQRAEMSQRFTA HHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCC NHPAVAALDAQIASLQGNLSKMGKSVQTLPDTEQTALRLLRDVHVDTELYTNLLNSAQQL CCCCEEHHHHHHHHHCCCHHHHCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH RIAKAGQVGDVRIVDFAEAADDPVRPKRLMVILISFGSGLFIGIVFAFVRKTLYGGVERP HHHCCCCCCCEEEEEEHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCH DELESALGVPVFAVVPRSEQQIRLQQDVMMRRRGLHVLAEQAPQDIAVEGVRNLRTSLQL HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHCEEEE TVDDKQNNVVMLTGSRPDAGKSFLSVNLSALVASTAKRTLVIDGDMRRGDVHSHFGLQHQ EEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCCC PGLSDVLRGGDLQSSIQREVLPGLDVLTKGSLPSHPSELLMSKRFETMLEELKNQYDLII CCHHHHHCCCCHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE IDTPPVLAVTDSTVIGKHVGTTLLVIRHGRHPVSELAETAKRLRNGGVNLQGVLLTDVPQ ECCCCEEEEECCHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCC AGAFIGSGYRGGYYGYESIAG CCCEECCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; a protein tyrosine [C]
Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]