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The map label for this gene is ybgF [C]

Identifier: 186477206

GI number: 186477206

Start: 2755696

End: 2756445

Strand: Direct

Name: ybgF [C]

Synonym: Bphy_2457

Alternate gene names: 186477206

Gene position: 2755696-2756445 (Clockwise)

Preceding gene: 186477205

Following gene: 186477209

Centisome position: 79.21

GC content: 63.47

Gene sequence:

>750_bases
ATGACGCACCGTTTTTCCTGGCTGCGCATGGCCGCAGCCGCCTGCGTCGCGGGGTCGGCCGTGATGGCCCTGCCCGCTCA
CGCCGGCATGTTCGACGACGATCAGGCTCGCCAGGCGATCCTCGATCTGCGCACCAAGACTGATGGTCTGTCGAGCCAGC
TGTCGGCGGCTCAACGCACGATCCTCGACCAGCAGAACCGTCTCGACCAGCTGAACCAGCAGGTCGCGACGCTGCGCGGG
CAGAACGAGGACCTCACCAATCAGGTCGCGACGTTGCAGAAGCAGCAGAAGGACTACTACAGCGACCTCGACGGTCGTCT
GAAGAAGTTCGAGCCGCAGCAACAGACGGTCGATGGCGTGGAAGGCACCGTGCAGCCGGGCGAAACGGAAGCGTTCAACG
CGGCTTCGCAGCAGTTCCGCAGCGGTGACTTCAAGAACGCGGCGGCCTCGTTCCGCAGCTTCATCACCAGGTACCCGCAA
AGCCCGTATCAGCCCACAGCGCAATACTGGCTCGGCAACGCGCTGTATGCGCTGCGCGACTACAAGGGCTCGACGTCGGT
ATGGCAAGGCGTCGTGCAGAAGTATCCGCAGCATCCGCGCGCGCCGGAGGCGCTGCTGGCCATTGCGAACAACCAGCTTG
AACAGGGCCAGAAGGCTGCCGCCAAAAAGACGCTCGAACAGATCGTCGCGCAGTACGGCGGATCGGATGTCGCGCAGTCA
GCACAGAGCAAGCTCTCGCAGATCAAATGA

Upstream 100 bases:

>100_bases
GGGCAAAGAAAAGCCGCAGGCGACGGGTCATGACGAAGCGTCGTGGGCGCAAAACCGCCGCGCGGACCTCGTCTATCAAC
AGTAATAGGTGACAAGCCGT

Downstream 100 bases:

>100_bases
TTCGTGGCGCCCGGCTCGCGCCGGACGTCCGTTTGTTGTGATGCAGTCAACGCGCAGTGTCGACGCTTGAAGAACCGATA
CGCGTGCCTCTCGCCGAAAA

Product: tol-pal system protein YbgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MTHRFSWLRMAAAACVAGSAVMALPAHAGMFDDDQARQAILDLRTKTDGLSSQLSAAQRTILDQQNRLDQLNQQVATLRG
QNEDLTNQVATLQKQQKDYYSDLDGRLKKFEPQQQTVDGVEGTVQPGETEAFNAASQQFRSGDFKNAAASFRSFITRYPQ
SPYQPTAQYWLGNALYALRDYKGSTSVWQGVVQKYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYGGSDVAQS
AQSKLSQIK

Sequences:

>Translated_249_residues
MTHRFSWLRMAAAACVAGSAVMALPAHAGMFDDDQARQAILDLRTKTDGLSSQLSAAQRTILDQQNRLDQLNQQVATLRG
QNEDLTNQVATLQKQQKDYYSDLDGRLKKFEPQQQTVDGVEGTVQPGETEAFNAASQQFRSGDFKNAAASFRSFITRYPQ
SPYQPTAQYWLGNALYALRDYKGSTSVWQGVVQKYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYGGSDVAQS
AQSKLSQIK
>Mature_248_residues
THRFSWLRMAAAACVAGSAVMALPAHAGMFDDDQARQAILDLRTKTDGLSSQLSAAQRTILDQQNRLDQLNQQVATLRGQ
NEDLTNQVATLQKQQKDYYSDLDGRLKKFEPQQQTVDGVEGTVQPGETEAFNAASQQFRSGDFKNAAASFRSFITRYPQS
PYQPTAQYWLGNALYALRDYKGSTSVWQGVVQKYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYGGSDVAQSA
QSKLSQIK

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybgF [H]

Homologues:

Organism=Escherichia coli, GI1786963, Length=103, Percent_Identity=33.0097087378641, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014162
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27502; Mature: 27371

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHRFSWLRMAAAACVAGSAVMALPAHAGMFDDDQARQAILDLRTKTDGLSSQLSAAQRT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
ILDQQNRLDQLNQQVATLRGQNEDLTNQVATLQKQQKDYYSDLDGRLKKFEPQQQTVDGV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
EGTVQPGETEAFNAASQQFRSGDFKNAAASFRSFITRYPQSPYQPTAQYWLGNALYALRD
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
YKGSTSVWQGVVQKYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYGGSDVAQS
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AQSKLSQIK
HHHHHHHCC
>Mature Secondary Structure 
THRFSWLRMAAAACVAGSAVMALPAHAGMFDDDQARQAILDLRTKTDGLSSQLSAAQRT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
ILDQQNRLDQLNQQVATLRGQNEDLTNQVATLQKQQKDYYSDLDGRLKKFEPQQQTVDGV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
EGTVQPGETEAFNAASQQFRSGDFKNAAASFRSFITRYPQSPYQPTAQYWLGNALYALRD
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
YKGSTSVWQGVVQKYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYGGSDVAQS
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AQSKLSQIK
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]