| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477203
Identifier: 186477203
GI number: 186477203
Start: 2752687
End: 2753742
Strand: Direct
Name: 186477203
Synonym: Bphy_2454
Alternate gene names: NA
Gene position: 2752687-2753742 (Clockwise)
Preceding gene: 186477202
Following gene: 186477204
Centisome position: 79.12
GC content: 66.1
Gene sequence:
>1056_bases ATGATCCGCCGACAGAACAACGCCTATCCGCTTCAGCCGCCGCGCGAACGCGGCACAGGGCGCGCCATTGCGCTCGCCGT GCTGATGCACGTGCTGCTCGGGTTCTTCCTGTATCACGGCATTCACTGGCAGAACAGCACACCCGCGGGCGCCGAAGCCG AACTGTGGACGGAAGTGCCCGACGTGCCGACGCCGCGCCCCGCTCCGCCGCCGCCCGCGCCTGCACCTGTCAAGCCCGCG CCGCAGGTCAATGACGAGGAAGCCGAGATCGCACTGCAGGAGAAGAAGCGCAAGCAGCAGCAGGAAGCTGAGCGTCAGGC TGAACTCGCCGAGCAGCAGCGCCGGCAGAAACTGCAGGCTCAGCAGGAAGCCGAGGCGAAGCGCCAGCAGCAACTCGCCG CCGACCAGGCAGCCGCCGCCGCCAAGCTCAAGCAACAGCAGCAGCTGCAGGCCGAAAAGCTCAAGCAACAACAGCAGCAA CAGCAAGCTGAAAAGCTCAAGCAGCAGCAGCTCGCCCAGCAGAAACAGGAGCAGTTGAAGAAGCAGCAGGAAGAGCAGCA GAAGGAACAGGAAGCAAAGCAGGCGCAAGCCGAGGCCCAGGCCAAGGCCGACGCCGCGAAGGCAGCCAAGGCCAAAGCCC AGGCGCAAGCGCAGGCCGAGGCCGCGAAGAAGCTGGACGCGGAACGCCGCCAGCGCCTCGCGTCGTTGCAGGGCATGGCG GGCGGTGAAGGTTCGACGGGCAACGGTCTAGCGAAGAGTGGTACGGGCACGGGCTCGGGCGGCAACGCTGCGTCGCCCGG TTATGCGGATAAGGTCAAACGCCGCGTACAACCGAACATCATCTGGTCGGGCGATACGTCGGGTCTCGAAACCGTCGTTT CCGTGCGCTGCTCGCCGACGGGCACGCTGCTGAGCGCGACGATCACGCGCAGCAGCGGCAATCAGGCGTGGGACGATGCC GCATTGCGCGCCGTGCAACGCTCGGATCCGATGCCGCAGGACATCAACGGCAAGACGCCCGAAAGCTTCAAGATTACGCT GCGGCCGGCCGCCTGA
Upstream 100 bases:
>100_bases TTGCCGCCGACAAGACGGTTAAATATGAAGTCGTGATGAACGTGATGTCCGACCTCAAGGCTCGCGGCGTCAAGCGCGTT GGATTGCTCGTCAAATCGCA
Downstream 100 bases:
>100_bases AGCCACGTTTACGGTTCGCCCGCTCGCGCGGGCCTAGCGGGAACGATTTCTGCTCAAGGCGGTCTGTTTGCAGTTGTGGA GTGTTAGAAATTTGTTTTTT
Product: protein TolA
Products: NA
Alternate protein names: NB-Like; NB Family Protein; NB C-Terminal; LA-Related Transport Transmembrane Protein; Membrane Spanning Protein In lA-TolQ-TolR Complex; LA Family Protein; LA Protein; NB Protein; Protein la; NB-Like Protein; NB Domain-Containing Protein; TOLA-Like Transport Transmembrane Protein
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MIRRQNNAYPLQPPRERGTGRAIALAVLMHVLLGFFLYHGIHWQNSTPAGAEAELWTEVPDVPTPRPAPPPPAPAPVKPA PQVNDEEAEIALQEKKRKQQQEAERQAELAEQQRRQKLQAQQEAEAKRQQQLAADQAAAAAKLKQQQQLQAEKLKQQQQQ QQAEKLKQQQLAQQKQEQLKKQQEEQQKEQEAKQAQAEAQAKADAAKAAKAKAQAQAQAEAAKKLDAERRQRLASLQGMA GGEGSTGNGLAKSGTGTGSGGNAASPGYADKVKRRVQPNIIWSGDTSGLETVVSVRCSPTGTLLSATITRSSGNQAWDDA ALRAVQRSDPMPQDINGKTPESFKITLRPAA
Sequences:
>Translated_351_residues MIRRQNNAYPLQPPRERGTGRAIALAVLMHVLLGFFLYHGIHWQNSTPAGAEAELWTEVPDVPTPRPAPPPPAPAPVKPA PQVNDEEAEIALQEKKRKQQQEAERQAELAEQQRRQKLQAQQEAEAKRQQQLAADQAAAAAKLKQQQQLQAEKLKQQQQQ QQAEKLKQQQLAQQKQEQLKKQQEEQQKEQEAKQAQAEAQAKADAAKAAKAKAQAQAQAEAAKKLDAERRQRLASLQGMA GGEGSTGNGLAKSGTGTGSGGNAASPGYADKVKRRVQPNIIWSGDTSGLETVVSVRCSPTGTLLSATITRSSGNQAWDDA ALRAVQRSDPMPQDINGKTPESFKITLRPAA >Mature_351_residues MIRRQNNAYPLQPPRERGTGRAIALAVLMHVLLGFFLYHGIHWQNSTPAGAEAELWTEVPDVPTPRPAPPPPAPAPVKPA PQVNDEEAEIALQEKKRKQQQEAERQAELAEQQRRQKLQAQQEAEAKRQQQLAADQAAAAAKLKQQQQLQAEKLKQQQQQ QQAEKLKQQQLAQQKQEQLKKQQEEQQKEQEAKQAQAEAQAKADAAKAAKAKAQAQAQAEAAKKLDAERRQRLASLQGMA GGEGSTGNGLAKSGTGTGSGGNAASPGYADKVKRRVQPNIIWSGDTSGLETVVSVRCSPTGTLLSATITRSSGNQAWDDA ALRAVQRSDPMPQDINGKTPESFKITLRPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38155; Mature: 38155
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRQNNAYPLQPPRERGTGRAIALAVLMHVLLGFFLYHGIHWQNSTPAGAEAELWTEVP CCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCC DVPTPRPAPPPPAPAPVKPAPQVNDEEAEIALQEKKRKQQQEAERQAELAEQQRRQKLQA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQEAEAKRQQQLAADQAAAAAKLKQQQQLQAEKLKQQQQQQQAEKLKQQQLAQQKQEQLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQQEEQQKEQEAKQAQAEAQAKADAAKAAKAKAQAQAQAEAAKKLDAERRQRLASLQGMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GGEGSTGNGLAKSGTGTGSGGNAASPGYADKVKRRVQPNIIWSGDTSGLETVVSVRCSPT CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCC GTLLSATITRSSGNQAWDDAALRAVQRSDPMPQDINGKTPESFKITLRPAA CHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure MIRRQNNAYPLQPPRERGTGRAIALAVLMHVLLGFFLYHGIHWQNSTPAGAEAELWTEVP CCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCC DVPTPRPAPPPPAPAPVKPAPQVNDEEAEIALQEKKRKQQQEAERQAELAEQQRRQKLQA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQEAEAKRQQQLAADQAAAAAKLKQQQQLQAEKLKQQQQQQQAEKLKQQQLAQQKQEQLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQQEEQQKEQEAKQAQAEAQAKADAAKAAKAKAQAQAQAEAAKKLDAERRQRLASLQGMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GGEGSTGNGLAKSGTGTGSGGNAASPGYADKVKRRVQPNIIWSGDTSGLETVVSVRCSPT CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCC GTLLSATITRSSGNQAWDDAALRAVQRSDPMPQDINGKTPESFKITLRPAA CHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA