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The map label for this gene is ybgC [C]

Identifier: 186477200

GI number: 186477200

Start: 2750912

End: 2751391

Strand: Direct

Name: ybgC [C]

Synonym: Bphy_2451

Alternate gene names: 186477200

Gene position: 2750912-2751391 (Clockwise)

Preceding gene: 186477199

Following gene: 186477201

Centisome position: 79.07

GC content: 63.54

Gene sequence:

>480_bases
ATGCGCGCCATGAATATGTCTGACAGTCAGTCCGGTGCCGAAATCGGCTTTATCTGGCCGATCCGGGTGTATTACGAAGA
CACCGACGCCGGCGGCATCGTGTTTTACGCGAACTACCTGAAGTTTTTCGAGCGCGCGCGCACCGAATGGCTGCGCGCGT
GCGGCGTCGATCAACGCAAGCTCGCTGAAGAAACGGGTGCGCTCTTCGTCGTGCGCAGCACTGCCCTCGACTATCGCGCG
CCTGCCAGGCTCGACGACATGCTGCGCATCGTCAGCCGGATCGAGAAGCTTGGCCGCGCGTCGGTGGATTTCGCCCAGGA
GGCCTGGCGTGGCGACACGCTGCTGGCCACGGGCACGATCCGCGTCGGTTGCGTCGACGCGAAATCGATGAAGCCGTCAG
CCATTCCTCCGCCGGTTCACGCCGCCTTGCAGCGCGGACCGGACTCAAACGGCGCCAGCGTGTCAACGGCGAGTATTTGA

Upstream 100 bases:

>100_bases
GCCGCCTCGTGCGGCCTCGGTGCGGCGCCTGTCGCGTGCGCAGAACACATTCCGGTACAACAGTGCCCAAAAATGCGGCG
CCCTTTTGCGTTCCGGTAAA

Downstream 100 bases:

>100_bases
ACGCGTTGTTACCTGGACAGTGAACTCGTAACGGTCACAACAAGACCAAGCATGGTTCGGCGAAGGACCCGCCGAAGCTT
CCGGTTTGCCGACTGAATGC

Product: tol-pal system-associated acyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MRAMNMSDSQSGAEIGFIWPIRVYYEDTDAGGIVFYANYLKFFERARTEWLRACGVDQRKLAEETGALFVVRSTALDYRA
PARLDDMLRIVSRIEKLGRASVDFAQEAWRGDTLLATGTIRVGCVDAKSMKPSAIPPPVHAALQRGPDSNGASVSTASI

Sequences:

>Translated_159_residues
MRAMNMSDSQSGAEIGFIWPIRVYYEDTDAGGIVFYANYLKFFERARTEWLRACGVDQRKLAEETGALFVVRSTALDYRA
PARLDDMLRIVSRIEKLGRASVDFAQEAWRGDTLLATGTIRVGCVDAKSMKPSAIPPPVHAALQRGPDSNGASVSTASI
>Mature_159_residues
MRAMNMSDSQSGAEIGFIWPIRVYYEDTDAGGIVFYANYLKFFERARTEWLRACGVDQRKLAEETGALFVVRSTALDYRA
PARLDDMLRIVSRIEKLGRASVDFAQEAWRGDTLLATGTIRVGCVDAKSMKPSAIPPPVHAALQRGPDSNGASVSTASI

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=130, Percent_Identity=47.6923076923077, Blast_Score=119, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 17477; Mature: 17477

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAMNMSDSQSGAEIGFIWPIRVYYEDTDAGGIVFYANYLKFFERARTEWLRACGVDQRK
CCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHH
LAEETGALFVVRSTALDYRAPARLDDMLRIVSRIEKLGRASVDFAQEAWRGDTLLATGTI
HHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCE
RVGCVDAKSMKPSAIPPPVHAALQRGPDSNGASVSTASI
EEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCC
>Mature Secondary Structure
MRAMNMSDSQSGAEIGFIWPIRVYYEDTDAGGIVFYANYLKFFERARTEWLRACGVDQRK
CCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHH
LAEETGALFVVRSTALDYRAPARLDDMLRIVSRIEKLGRASVDFAQEAWRGDTLLATGTI
HHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCE
RVGCVDAKSMKPSAIPPPVHAALQRGPDSNGASVSTASI
EEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]