| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477140
Identifier: 186477140
GI number: 186477140
Start: 2684562
End: 2684960
Strand: Reverse
Name: 186477140
Synonym: Bphy_2389
Alternate gene names: NA
Gene position: 2684960-2684562 (Counterclockwise)
Preceding gene: 186477141
Following gene: 186477139
Centisome position: 77.17
GC content: 54.64
Gene sequence:
>399_bases ATGCCGATGAGTCGTGACGAAATGAATCGCGCATTGAAAGCGCGTTTTGTTCCAGCGCTTCGCCAACTAGGGTTCAAAGG TGCTTTGCCTCATTTTCGACGCCTTCGAGATGATCGAGTCGATTTGTTGACAGTGCAGTTCGATCGCCACGGAGGAGGAT TCGTTGTGGAACTGTCTCAATGCGGCGCGGAGGGTATCACCACCCACTGGGGCAAATTCATTTCCGCGAACACGGTTACG GCGCACGATTTACACCCAAGTCAACGTCATAGACTCGGGTCGCCTGGACCGAATATCGACCATTGGTTCAGATTCGACGA CGGCACTCTGCCGAGGGCAGTCGCCGACTCGCTATGCACTCACATCGACGAAGCCGAGCGTTGGTGGGCTAGCCATTAA
Upstream 100 bases:
>100_bases GGCGTGCGGCCAATTTCAGCCGTTCGACATCATCTCCTAAATCGCTGGCAATCAAGGTTGGGAAACTGGCGGCAGCCTAG CCGCCTCATTTTGACGGGGT
Downstream 100 bases:
>100_bases CCTAGCCCTAGCGGCGGCCACGACTGTTCGGTCGCATGCTAGCGGGTACCGGGAGGGCGACCCTCGGCCATAAGCGGTCG GTCGCCGTAGCTATGGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MPMSRDEMNRALKARFVPALRQLGFKGALPHFRRLRDDRVDLLTVQFDRHGGGFVVELSQCGAEGITTHWGKFISANTVT AHDLHPSQRHRLGSPGPNIDHWFRFDDGTLPRAVADSLCTHIDEAERWWASH
Sequences:
>Translated_132_residues MPMSRDEMNRALKARFVPALRQLGFKGALPHFRRLRDDRVDLLTVQFDRHGGGFVVELSQCGAEGITTHWGKFISANTVT AHDLHPSQRHRLGSPGPNIDHWFRFDDGTLPRAVADSLCTHIDEAERWWASH >Mature_131_residues PMSRDEMNRALKARFVPALRQLGFKGALPHFRRLRDDRVDLLTVQFDRHGGGFVVELSQCGAEGITTHWGKFISANTVTA HDLHPSQRHRLGSPGPNIDHWFRFDDGTLPRAVADSLCTHIDEAERWWASH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15023; Mature: 14892
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMSRDEMNRALKARFVPALRQLGFKGALPHFRRLRDDRVDLLTVQFDRHGGGFVVELSQ CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEEEEECCCCCEEEEHHH CGAEGITTHWGKFISANTVTAHDLHPSQRHRLGSPGPNIDHWFRFDDGTLPRAVADSLCT CCCCCCHHHHHHHHCCCCEEECCCCCHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHH HIDEAERWWASH HHHHHHHHHCCC >Mature Secondary Structure PMSRDEMNRALKARFVPALRQLGFKGALPHFRRLRDDRVDLLTVQFDRHGGGFVVELSQ CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEEEEECCCCCEEEEHHH CGAEGITTHWGKFISANTVTAHDLHPSQRHRLGSPGPNIDHWFRFDDGTLPRAVADSLCT CCCCCCHHHHHHHHCCCCEEECCCCCHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHH HIDEAERWWASH HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA