| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is glnH [H]
Identifier: 186477120
GI number: 186477120
Start: 2661206
End: 2661976
Strand: Reverse
Name: glnH [H]
Synonym: Bphy_2369
Alternate gene names: 186477120
Gene position: 2661976-2661206 (Counterclockwise)
Preceding gene: 186477122
Following gene: 186477119
Centisome position: 76.51
GC content: 60.31
Gene sequence:
>771_bases ATGGATACGTTCGTCAAACGCTTCACCCTGTTCGCAGCTGGTCTTGCCGCAGCTTTCGCGATTTCATCCGGTGCCGCAAA TGCCGCCGAACCGACCTACAAGGTCGGCGCAACGGCCACGGGCGTGCCGTTCACGTTTCTCGACGTCAAGACGAATTCAA TCCAGGGCATGATGGTCGACGCGATCACCGCCGCGGGCAAAGCGGCGGGCTTCAACGTCGACGTGCAGCAGAATGTGTTC TCGGCGCTGATTCCGTCGCTGACCACTCAGAAGATCGACATCATTTCGGCTGCGATGCTCAAGACGCCAGCACGCCAGCA GATCGTCGATTTCTCGGACACCGTCTATTCGTACGGCGAAGGTGTCGTCGTGAAAGCGGACGACAAGGGCCACTACACGT CGATGGATGACTTCAAGGGCGAGGTAGTGGGCGCGCAGGTCGGGACCGCGTTCGTCGATGCGCTCAACAAGAAAGGCATC TTCAAGGAAGTGCGCACCTACGATTCGGTCGCGGACATCATGCGCGACGTCGCGCTCGGGCGCATCAAGGCTGGCTTCGC GGATCAGCCCATTGTCGCGTATCAACTGCAGCAGGGCGCCAATGCGCAGGTCCGGCTCGTGCCCGAATACCAGTCGGCAG TGAAGGGACAGGTGTGCTTCATCGTGCGCAAGGGCGACACCGCAACGCTCGAGCAGCTTAATGCCGCGATCAGGAAGATG AAGGCCGACGGCACGCTGCAGCAGATTCTGCAGAAGTGGCACATGGGCTGA
Upstream 100 bases:
>100_bases TCTCGTGGCGATTTTTTTGATTCGATTATGATGGTCCGGCGGTCACAACATGAAATCAGCCGGCGCGTGTTGACACGCCG GCTCCTGCCCGGAGATATGC
Downstream 100 bases:
>100_bases CAGGGCAGCCGTATCGCTGCATTCGAAACTGTCCGCGTGTGAACGCGCGCGGACGATTTGCCATGCGTGTCGGGAGCCGC GATGTTTTTGCAGAACGCAA
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: GlnBP [H]
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MDTFVKRFTLFAAGLAAAFAISSGAANAAEPTYKVGATATGVPFTFLDVKTNSIQGMMVDAITAAGKAAGFNVDVQQNVF SALIPSLTTQKIDIISAAMLKTPARQQIVDFSDTVYSYGEGVVVKADDKGHYTSMDDFKGEVVGAQVGTAFVDALNKKGI FKEVRTYDSVADIMRDVALGRIKAGFADQPIVAYQLQQGANAQVRLVPEYQSAVKGQVCFIVRKGDTATLEQLNAAIRKM KADGTLQQILQKWHMG
Sequences:
>Translated_256_residues MDTFVKRFTLFAAGLAAAFAISSGAANAAEPTYKVGATATGVPFTFLDVKTNSIQGMMVDAITAAGKAAGFNVDVQQNVF SALIPSLTTQKIDIISAAMLKTPARQQIVDFSDTVYSYGEGVVVKADDKGHYTSMDDFKGEVVGAQVGTAFVDALNKKGI FKEVRTYDSVADIMRDVALGRIKAGFADQPIVAYQLQQGANAQVRLVPEYQSAVKGQVCFIVRKGDTATLEQLNAAIRKM KADGTLQQILQKWHMG >Mature_256_residues MDTFVKRFTLFAAGLAAAFAISSGAANAAEPTYKVGATATGVPFTFLDVKTNSIQGMMVDAITAAGKAAGFNVDVQQNVF SALIPSLTTQKIDIISAAMLKTPARQQIVDFSDTVYSYGEGVVVKADDKGHYTSMDDFKGEVVGAQVGTAFVDALNKKGI FKEVRTYDSVADIMRDVALGRIKAGFADQPIVAYQLQQGANAQVRLVPEYQSAVKGQVCFIVRKGDTATLEQLNAAIRKM KADGTLQQILQKWHMG
Specific function: Involved in a glutamine-transport system glnHPQ [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787031, Length=241, Percent_Identity=28.6307053941909, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1787088, Length=244, Percent_Identity=30.327868852459, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1787085, Length=245, Percent_Identity=32.2448979591837, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1788228, Length=247, Percent_Identity=28.3400809716599, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1788648, Length=236, Percent_Identity=29.6610169491525, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1788649, Length=257, Percent_Identity=26.0700389105058, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 27390; Mature: 27390
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTFVKRFTLFAAGLAAAFAISSGAANAAEPTYKVGATATGVPFTFLDVKTNSIQGMMVD CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEEEEEECCCCCHHHHH AITAAGKAAGFNVDVQQNVFSALIPSLTTQKIDIISAAMLKTPARQQIVDFSDTVYSYGE HHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC GVVVKADDKGHYTSMDDFKGEVVGAQVGTAFVDALNKKGIFKEVRTYDSVADIMRDVALG EEEEEECCCCCCCCCHHCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RIKAGFADQPIVAYQLQQGANAQVRLVPEYQSAVKGQVCFIVRKGDTATLEQLNAAIRKM HHHCCCCCCCEEEEEECCCCCCEEEEEECHHHHCCCEEEEEEECCCHHHHHHHHHHHHHH KADGTLQQILQKWHMG CCCCHHHHHHHHHCCC >Mature Secondary Structure MDTFVKRFTLFAAGLAAAFAISSGAANAAEPTYKVGATATGVPFTFLDVKTNSIQGMMVD CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEEEEEECCCCCHHHHH AITAAGKAAGFNVDVQQNVFSALIPSLTTQKIDIISAAMLKTPARQQIVDFSDTVYSYGE HHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC GVVVKADDKGHYTSMDDFKGEVVGAQVGTAFVDALNKKGIFKEVRTYDSVADIMRDVALG EEEEEECCCCCCCCCHHCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RIKAGFADQPIVAYQLQQGANAQVRLVPEYQSAVKGQVCFIVRKGDTATLEQLNAAIRKM HHHCCCCCCCEEEEEECCCCCCEEEEEECHHHHCCCEEEEEEECCCHHHHHHHHHHHHHH KADGTLQQILQKWHMG CCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]