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The map label for this gene is xylH [H]

Identifier: 186477090

GI number: 186477090

Start: 2623705

End: 2624901

Strand: Reverse

Name: xylH [H]

Synonym: Bphy_2339

Alternate gene names: 186477090

Gene position: 2624901-2623705 (Counterclockwise)

Preceding gene: 186477091

Following gene: 186477089

Centisome position: 75.45

GC content: 64.49

Gene sequence:

>1197_bases
ATGACTCCTGATCTCACCTCTTCCGATAGCCACGCAAAACAGGGCGCTGCGCTTGCATCGGGGCAACGCATCAAGCTGCT
GTTCGCACGTTACAAGCTGCTCGCGTTGCTGCTGGCCGTCACCGTCATCTGGGCGTTCTTCTCGTTCCTCACGGAAGGCG
CATTCGTCACGCCGCGCAATCTGTCGAACCTGCTGCGGCAGATGTCGATTACGGGGATGCTCGCGTGCGGGATGGTGTTC
ATCATCATCGCGGGCGAGATCGATCTGTCCGTCGGTTCGCTGCTCGGTCTGCTCGGCGGCGTCGCGGCGATACTCGACGT
CACGTATCACTGGCCGCTCGCGGCGACGCTGCCCGCCGTGATGCTGCTCGGCGTGGTCGTCGGCTTGTTCAACGGCTGGT
GGTCGACGTATCGGCGCGTGCCGTCGTTCATCGTCGGGCTGGGCGGCATGCTCGCGTATCGCGGCGTGCTGCTCGGCGTC
ACGGGGGGATCGACGATCGCGCCCGTGTCCGACAATTTCGTTTTCATCGGCCAGGGCTACCTGCCGCGCGTGGCGGGCGA
TGCACTCGCCGTCGTTCTGTTCGTCCTGCTCGCGGCACTGACCGTGCGGCAGCGGCAAAAGCGTCAGCACTACAAGCTGA
GCGTCGTACCGCTGTGGCAGGACGTGGTGAAGATTGTCGCGGCGGGGCTGATCCTGTTCGCGTTCGTCGCGACGCTCAAC
CGTTACGGCGGCATCCCCGTGCCCGTGCTGCTGCTGCTTGCGCTGCTCGGCATCTTCACATACATCGCGACGCAGACGGT
GTTCGGCCGCCGCATCTATGCCGTTGGCTCGAATCTCGAAGCGACGCGTTTGTCCGGCGTCAATACGAACCGCGTGAAGC
TCGCGATCTTCGCGCTGATGGGACTGATGTGCGCATTCGGCGGCCTCATCAATACGGCGCGGCTCGCAGCGGGCTCGCCG
TCGGCGGGATCGATGGGCGAACTCGATGCGATCGCAGCGTGTTTCATCGGCGGCACATCGATGCGCGGCGGCTCAGGTAC
CGTCTACGGCGCGCTGATCGGCGCGCTCGTGATGGCGAGCCTCGACAACGGCATGTCGATGCTCGATGTCGACTCGTACT
GGCAGATGATCGTGAAGGGCGGCATCCTCGTGCTGGCCGTATGGATCGACGTGATCTCGGGGTCCGACCGGCGCTAG

Upstream 100 bases:

>100_bases
ACGGACTCACGCAGGAACACATTCTCACGGCTGCCATCGCGACGAACGCGAAAGGCGCGAACATCCAAGGCAATGGCCCC
ACTCAACTGGCGAGCGTCGC

Downstream 100 bases:

>100_bases
CGCTGCGCGCACGGCGCTGGTGCGCTGCACCACGGCACAGCATCCGCGCGCTTCGTTGAGGCGCGCGCAAGCGCCCTGAA
AAGGGCGCTTTTCATTGGCG

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTPDLTSSDSHAKQGAALASGQRIKLLFARYKLLALLLAVTVIWAFFSFLTEGAFVTPRNLSNLLRQMSITGMLACGMVF
IIIAGEIDLSVGSLLGLLGGVAAILDVTYHWPLAATLPAVMLLGVVVGLFNGWWSTYRRVPSFIVGLGGMLAYRGVLLGV
TGGSTIAPVSDNFVFIGQGYLPRVAGDALAVVLFVLLAALTVRQRQKRQHYKLSVVPLWQDVVKIVAAGLILFAFVATLN
RYGGIPVPVLLLLALLGIFTYIATQTVFGRRIYAVGSNLEATRLSGVNTNRVKLAIFALMGLMCAFGGLINTARLAAGSP
SAGSMGELDAIAACFIGGTSMRGGSGTVYGALIGALVMASLDNGMSMLDVDSYWQMIVKGGILVLAVWIDVISGSDRR

Sequences:

>Translated_398_residues
MTPDLTSSDSHAKQGAALASGQRIKLLFARYKLLALLLAVTVIWAFFSFLTEGAFVTPRNLSNLLRQMSITGMLACGMVF
IIIAGEIDLSVGSLLGLLGGVAAILDVTYHWPLAATLPAVMLLGVVVGLFNGWWSTYRRVPSFIVGLGGMLAYRGVLLGV
TGGSTIAPVSDNFVFIGQGYLPRVAGDALAVVLFVLLAALTVRQRQKRQHYKLSVVPLWQDVVKIVAAGLILFAFVATLN
RYGGIPVPVLLLLALLGIFTYIATQTVFGRRIYAVGSNLEATRLSGVNTNRVKLAIFALMGLMCAFGGLINTARLAAGSP
SAGSMGELDAIAACFIGGTSMRGGSGTVYGALIGALVMASLDNGMSMLDVDSYWQMIVKGGILVLAVWIDVISGSDRR
>Mature_397_residues
TPDLTSSDSHAKQGAALASGQRIKLLFARYKLLALLLAVTVIWAFFSFLTEGAFVTPRNLSNLLRQMSITGMLACGMVFI
IIAGEIDLSVGSLLGLLGGVAAILDVTYHWPLAATLPAVMLLGVVVGLFNGWWSTYRRVPSFIVGLGGMLAYRGVLLGVT
GGSTIAPVSDNFVFIGQGYLPRVAGDALAVVLFVLLAALTVRQRQKRQHYKLSVVPLWQDVVKIVAAGLILFAFVATLNR
YGGIPVPVLLLLALLGIFTYIATQTVFGRRIYAVGSNLEATRLSGVNTNRVKLAIFALMGLMCAFGGLINTARLAAGSPS
AGSMGELDAIAACFIGGTSMRGGSGTVYGALIGALVMASLDNGMSMLDVDSYWQMIVKGGILVLAVWIDVISGSDRR

Specific function: Part of the binding-protein-dependent transport system for D-xylose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4214

COG function: function code G; ABC-type xylose transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789992, Length=394, Percent_Identity=50.761421319797, Blast_Score=341, Evalue=5e-95,
Organism=Escherichia coli, GI1790191, Length=147, Percent_Identity=46.9387755102041, Blast_Score=138, Evalue=8e-34,
Organism=Escherichia coli, GI1790524, Length=381, Percent_Identity=29.3963254593176, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1788896, Length=152, Percent_Identity=39.4736842105263, Blast_Score=125, Evalue=6e-30,
Organism=Escherichia coli, GI145693152, Length=347, Percent_Identity=27.9538904899135, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1788471, Length=346, Percent_Identity=30.3468208092486, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787793, Length=134, Percent_Identity=32.8358208955224, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI87082395, Length=136, Percent_Identity=33.8235294117647, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1787794, Length=144, Percent_Identity=27.0833333333333, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 42040; Mature: 41908

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDLTSSDSHAKQGAALASGQRIKLLFARYKLLALLLAVTVIWAFFSFLTEGAFVTPRN
CCCCCCCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LSNLLRQMSITGMLACGMVFIIIAGEIDLSVGSLLGLLGGVAAILDVTYHWPLAATLPAV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
MLLGVVVGLFNGWWSTYRRVPSFIVGLGGMLAYRGVLLGVTGGSTIAPVSDNFVFIGQGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEECCCCCCEEEEECCC
LPRVAGDALAVVLFVLLAALTVRQRQKRQHYKLSVVPLWQDVVKIVAAGLILFAFVATLN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
RYGGIPVPVLLLLALLGIFTYIATQTVFGRRIYAVGSNLEATRLSGVNTNRVKLAIFALM
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHCCCCCCCHHHHHHHHHH
GLMCAFGGLINTARLAAGSPSAGSMGELDAIAACFIGGTSMRGGSGTVYGALIGALVMAS
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
LDNGMSMLDVDSYWQMIVKGGILVLAVWIDVISGSDRR
HCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TPDLTSSDSHAKQGAALASGQRIKLLFARYKLLALLLAVTVIWAFFSFLTEGAFVTPRN
CCCCCCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LSNLLRQMSITGMLACGMVFIIIAGEIDLSVGSLLGLLGGVAAILDVTYHWPLAATLPAV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
MLLGVVVGLFNGWWSTYRRVPSFIVGLGGMLAYRGVLLGVTGGSTIAPVSDNFVFIGQGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEECCCCCCEEEEECCC
LPRVAGDALAVVLFVLLAALTVRQRQKRQHYKLSVVPLWQDVVKIVAAGLILFAFVATLN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
RYGGIPVPVLLLLALLGIFTYIATQTVFGRRIYAVGSNLEATRLSGVNTNRVKLAIFALM
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHCCCCCCCHHHHHHHHHH
GLMCAFGGLINTARLAAGSPSAGSMGELDAIAACFIGGTSMRGGSGTVYGALIGALVMAS
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
LDNGMSMLDVDSYWQMIVKGGILVLAVWIDVISGSDRR
HCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]