| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477054
Identifier: 186477054
GI number: 186477054
Start: 2587482
End: 2588405
Strand: Direct
Name: 186477054
Synonym: Bphy_2303
Alternate gene names: NA
Gene position: 2587482-2588405 (Clockwise)
Preceding gene: 186477050
Following gene: 186477055
Centisome position: 74.37
GC content: 56.82
Gene sequence:
>924_bases ATGCAATGGCTTAAACGCGGGCTTGTCTATCGCACCGATCAGGATGCTCCAGCCGGCACCGTGCGCGCCATGGTTCCGAC CCCTTTACTCATTGACGATCGCACCATCCGCATTTTCCTCACAGTTTGCGATGGGGACAATGTGGGAAGACCGTACTTCG TCGACGTCGACGCGTCCGACCCTACGAAAATCATCGGGAAATCGACCGGCCCCCTGATGCGAACGGGTGCTCCAGGGGCA TTCGACGAACGGGGCATCGTCTGTGCGCAAATACTCCGGAATACGGACGGCACGTTGATGATGTATTACTCCGGCTTTGA ACGGTCTGACTCCGTCCGCTATAAGATATTCATGGGTCTCGCGAAAAGCGTCGATAATGGCGAGAGCTTCGTACGCGTAC AAGATTCACCCATCTTGGGGCCCACCGAGGCGGAATCGATGTTCCGGTGCGCGCCCTTCGTCATAGCGACCGAACGCGGC TATCAGATGTGGTACACGGCCGGGTCAAGCTGGGAAGTCGTCGGCGGCAAAGAGGTCCCGCGCTACTCGCTGAAATACCT CGAATCGACCGACGGAATCGACTGGGCAAGTGAAGGCGTTCCGTGCATGCGCTTTGGGCCGGATGAACATGGCATTGGTC GTCCGTGGATCACGAAATCGCCAGAGGGCAAATACCAGCTCTACTACTCCGTCCGCCGTATTTCGCTCGCCGCATATCGC CTCGGTTACGCTGAGTCCGACAATGGTCTCGACTGGAATCGGATGGATGATCAACTCGGGTTAGATGTTTCACCCGGCTC GTTCGACTCCGATGGGATGTCCTATACCGCGTTGATCAACGCTGGCGACAAGACTTACTGTTTCTACAACGGTAACGGGT TCGGTCGCGACGGATTCGCAGTTGCAGAACTCATTGCCCCTTAG
Upstream 100 bases:
>100_bases CGGCGGTAAGGTCGGGTAAGCAGTTTTCCAATCCACAGCCCCGTACTAAACCCGGCACCCGGTCGCTATAATGGCAGTTT AGTTCGGACAATTCCGGCAT
Downstream 100 bases:
>100_bases ATTGCGCTCGCAATCCTCCGACATGAAAGACTCTGAAACGGCAGTGCTGATGCACGGAGTATCGCAACGACTAGCGTCCG AAGATGTTTTCGACGAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MQWLKRGLVYRTDQDAPAGTVRAMVPTPLLIDDRTIRIFLTVCDGDNVGRPYFVDVDASDPTKIIGKSTGPLMRTGAPGA FDERGIVCAQILRNTDGTLMMYYSGFERSDSVRYKIFMGLAKSVDNGESFVRVQDSPILGPTEAESMFRCAPFVIATERG YQMWYTAGSSWEVVGGKEVPRYSLKYLESTDGIDWASEGVPCMRFGPDEHGIGRPWITKSPEGKYQLYYSVRRISLAAYR LGYAESDNGLDWNRMDDQLGLDVSPGSFDSDGMSYTALINAGDKTYCFYNGNGFGRDGFAVAELIAP
Sequences:
>Translated_307_residues MQWLKRGLVYRTDQDAPAGTVRAMVPTPLLIDDRTIRIFLTVCDGDNVGRPYFVDVDASDPTKIIGKSTGPLMRTGAPGA FDERGIVCAQILRNTDGTLMMYYSGFERSDSVRYKIFMGLAKSVDNGESFVRVQDSPILGPTEAESMFRCAPFVIATERG YQMWYTAGSSWEVVGGKEVPRYSLKYLESTDGIDWASEGVPCMRFGPDEHGIGRPWITKSPEGKYQLYYSVRRISLAAYR LGYAESDNGLDWNRMDDQLGLDVSPGSFDSDGMSYTALINAGDKTYCFYNGNGFGRDGFAVAELIAP >Mature_307_residues MQWLKRGLVYRTDQDAPAGTVRAMVPTPLLIDDRTIRIFLTVCDGDNVGRPYFVDVDASDPTKIIGKSTGPLMRTGAPGA FDERGIVCAQILRNTDGTLMMYYSGFERSDSVRYKIFMGLAKSVDNGESFVRVQDSPILGPTEAESMFRCAPFVIATERG YQMWYTAGSSWEVVGGKEVPRYSLKYLESTDGIDWASEGVPCMRFGPDEHGIGRPWITKSPEGKYQLYYSVRRISLAAYR LGYAESDNGLDWNRMDDQLGLDVSPGSFDSDGMSYTALINAGDKTYCFYNGNGFGRDGFAVAELIAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34021; Mature: 34021
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQWLKRGLVYRTDQDAPAGTVRAMVPTPLLIDDRTIRIFLTVCDGDNVGRPYFVDVDASD CCHHHCCCEEECCCCCCCCEEEEECCCCEEECCCEEEEEEEEECCCCCCCCEEEEECCCC PTKIIGKSTGPLMRTGAPGAFDERGIVCAQILRNTDGTLMMYYSGFERSDSVRYKIFMGL CHHEECCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEEH AKSVDNGESFVRVQDSPILGPTEAESMFRCAPFVIATERGYQMWYTAGSSWEVVGGKEVP HHCCCCCCEEEEECCCCCCCCCCHHHHHHHCCEEEEECCCEEEEEECCCCEEEECCCCCC RYSLKYLESTDGIDWASEGVPCMRFGPDEHGIGRPWITKSPEGKYQLYYSVRRISLAAYR CHHHHEECCCCCCCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEHHEEEEEE LGYAESDNGLDWNRMDDQLGLDVSPGSFDSDGMSYTALINAGDKTYCFYNGNGFGRDGFA ECCCCCCCCCCCCCCCHHCCCEECCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCHH VAELIAP HHHHHCC >Mature Secondary Structure MQWLKRGLVYRTDQDAPAGTVRAMVPTPLLIDDRTIRIFLTVCDGDNVGRPYFVDVDASD CCHHHCCCEEECCCCCCCCEEEEECCCCEEECCCEEEEEEEEECCCCCCCCEEEEECCCC PTKIIGKSTGPLMRTGAPGAFDERGIVCAQILRNTDGTLMMYYSGFERSDSVRYKIFMGL CHHEECCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEEH AKSVDNGESFVRVQDSPILGPTEAESMFRCAPFVIATERGYQMWYTAGSSWEVVGGKEVP HHCCCCCCEEEEECCCCCCCCCCHHHHHHHCCEEEEECCCEEEEEECCCCEEEECCCCCC RYSLKYLESTDGIDWASEGVPCMRFGPDEHGIGRPWITKSPEGKYQLYYSVRRISLAAYR CHHHHEECCCCCCCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEHHEEEEEE LGYAESDNGLDWNRMDDQLGLDVSPGSFDSDGMSYTALINAGDKTYCFYNGNGFGRDGFA ECCCCCCCCCCCCCCCHHCCCEECCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCHH VAELIAP HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]