| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477037
Identifier: 186477037
GI number: 186477037
Start: 2563496
End: 2564068
Strand: Direct
Name: 186477037
Synonym: Bphy_2286
Alternate gene names: NA
Gene position: 2563496-2564068 (Clockwise)
Preceding gene: 186477036
Following gene: 186477039
Centisome position: 73.68
GC content: 55.85
Gene sequence:
>573_bases TTGGCACTGGAAGCACTTCTTTCGACGCGTCGATATGCCCCGGACTCTGAGTCGACTGCTCAGATCCACGCTGCCGCTGC GTGCAGCAATCGTTTTCGGTCACAAACAATCGGATCCGTGCTGACACCATTTGAAAGTTGCTTGCAGGTCGCGATGCACA GCCGATCTCATAAGCGCTCTGATTCACAGCGTAAGACGAAGAGACGGTGCGACGGACTCCTTGCACATAACCGGGAAAAG GCTACGCAGACAAAGGACCTGCTTCGCCGCAGCGCTGCATTGCGCTCGCGCGTTAAACAGTTTCCCCGCGGCACGCCTGC CACTTTTCGCGCAGGAATCAATTCTCTGGTCGTTGTTCAAAGCATTGCAGTGCTCGACCGCCCCATCGATGCACTAGCGA GATTCGATGCCGCCATTCTCAACGGCACACGGGATCTGACTGAATCCGACAACGGCATTCGCTCAGATGATAGACGCTAT CGTCAACACGGAAAGTGCGAACTACGACGAGCTCGTTGGACGAGTGTTCGAGCACCTGTAGTTTCCTCGCTGGCGCGACG TGTCCTACGTTAG
Upstream 100 bases:
>100_bases CTTCTCGTATGGCGAGACACGCGCCCACGTCTTCATCGATGCCTGCCTGGACCCGGGGGTTTACACAGGGCCTGCGCGAT GACACGTATTACTTTGACCG
Downstream 100 bases:
>100_bases CACCGCTGGATCATTGCTGTAACTCAACGAAGCCTGTTTATCGCCGCCACACAAGTTCGTCAGTCACTGTCGACTGGAAG TCGTCAAGCCGTTAAAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MALEALLSTRRYAPDSESTAQIHAAAACSNRFRSQTIGSVLTPFESCLQVAMHSRSHKRSDSQRKTKRRCDGLLAHNREK ATQTKDLLRRSAALRSRVKQFPRGTPATFRAGINSLVVVQSIAVLDRPIDALARFDAAILNGTRDLTESDNGIRSDDRRY RQHGKCELRRARWTSVRAPVVSSLARRVLR
Sequences:
>Translated_190_residues MALEALLSTRRYAPDSESTAQIHAAAACSNRFRSQTIGSVLTPFESCLQVAMHSRSHKRSDSQRKTKRRCDGLLAHNREK ATQTKDLLRRSAALRSRVKQFPRGTPATFRAGINSLVVVQSIAVLDRPIDALARFDAAILNGTRDLTESDNGIRSDDRRY RQHGKCELRRARWTSVRAPVVSSLARRVLR >Mature_189_residues ALEALLSTRRYAPDSESTAQIHAAAACSNRFRSQTIGSVLTPFESCLQVAMHSRSHKRSDSQRKTKRRCDGLLAHNREKA TQTKDLLRRSAALRSRVKQFPRGTPATFRAGINSLVVVQSIAVLDRPIDALARFDAAILNGTRDLTESDNGIRSDDRRYR QHGKCELRRARWTSVRAPVVSSLARRVLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21338; Mature: 21206
Theoretical pI: Translated: 11.94; Mature: 11.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALEALLSTRRYAPDSESTAQIHAAAACSNRFRSQTIGSVLTPFESCLQVAMHSRSHKRS CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DSQRKTKRRCDGLLAHNREKATQTKDLLRRSAALRSRVKQFPRGTPATFRAGINSLVVVQ HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SIAVLDRPIDALARFDAAILNGTRDLTESDNGIRSDDRRYRQHGKCELRRARWTSVRAPV HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH VSSLARRVLR HHHHHHHHHC >Mature Secondary Structure ALEALLSTRRYAPDSESTAQIHAAAACSNRFRSQTIGSVLTPFESCLQVAMHSRSHKRS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DSQRKTKRRCDGLLAHNREKATQTKDLLRRSAALRSRVKQFPRGTPATFRAGINSLVVVQ HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SIAVLDRPIDALARFDAAILNGTRDLTESDNGIRSDDRRYRQHGKCELRRARWTSVRAPV HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH VSSLARRVLR HHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA