Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is fliY [H]

Identifier: 186477008

GI number: 186477008

Start: 2531192

End: 2531992

Strand: Direct

Name: fliY [H]

Synonym: Bphy_2257

Alternate gene names: 186477008

Gene position: 2531192-2531992 (Clockwise)

Preceding gene: 186477007

Following gene: 186477009

Centisome position: 72.75

GC content: 64.67

Gene sequence:

>801_bases
ATGACCTGCACAACCGCCCATCGCCCGCGCCGCGCGTGGCTCGCCACGCTGCTGCTCGCACCACTCCTGCTCGCTGCGCC
GCTCGCGCACGCCGACGCGCTCGACAACATCACGAAGTCGGGCGTCCTCAAGGTCGCCGTGCCCGAAGACTATCCGCCGT
TCGGCTCCGTCGGCCCGGACCTGAAGCCGCAGGGCTACGACATCGACACGGCCGCGCTGCTCGCGAAGTCGATGAACGTG
AAGCTCGAACTGGTGCCCGTCAACAGCGCGAACCGGATTCCGTATCTGCAAACCAACAAGGTCGATCTCGTGATCTCGTC
GCTCGGCAAGACAGCAGAGCGCGAGAAGGTGATCGACTTTTCGTCCGCCTATGCGCCCTACTACCAAGGCGTGTTCGGCC
CTGCAGACCTGAAGGTCAGCAGCCCCGCCGACCTGACAGGCAAGACGGTCGGCGCAACGCGCGGCGCGCTCGAAGAAATC
GCGCTCACGCAGATGGCGCCCAACGCGACGATCAAGCGCTTCGAAGACAACAACGCGACCATCGCCGCGTTCCTGTCGGG
CCAGGTGCAGCTGATCGCGGCAGGCAACATCGTCGCCGCTGCGATTCTCGCCAAGAACCCGCCGCGCCGTCCGGAACCGA
AGTTCGTGATCAAGAACTCGCCGTGCTTCGTGGGGCTCAACAAGAACGAGCCGCGTCTGCAGCAGAAAGTCGATGCCGCC
ATCGCGCAGGCGAAGCGTGACGGCACGCTCAACACGATGTCGAAGAAGTGGTTCGGCACGGGACTGCCTGCCGATCTGTA
A

Upstream 100 bases:

>100_bases
ATGGCATAGCCCTTGCTGCATATGGCGCCTCGCACACGCACGCCACGGCATGCGCGTCGCGAGATCCGCTAAAAACCACA
CGCCGAAGCCCATCGCCGAC

Downstream 100 bases:

>100_bases
GCGGTGCGTCGGTTGAAGCTGGTATCGTGAGGCGGCGCGACGAACGACATGCGCCGCCCGTGCATCAATAAAACGACTCA
CGCGCCTGCCCTCGCGCGGG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MTCTTAHRPRRAWLATLLLAPLLLAAPLAHADALDNITKSGVLKVAVPEDYPPFGSVGPDLKPQGYDIDTAALLAKSMNV
KLELVPVNSANRIPYLQTNKVDLVISSLGKTAEREKVIDFSSAYAPYYQGVFGPADLKVSSPADLTGKTVGATRGALEEI
ALTQMAPNATIKRFEDNNATIAAFLSGQVQLIAAGNIVAAAILAKNPPRRPEPKFVIKNSPCFVGLNKNEPRLQQKVDAA
IAQAKRDGTLNTMSKKWFGTGLPADL

Sequences:

>Translated_266_residues
MTCTTAHRPRRAWLATLLLAPLLLAAPLAHADALDNITKSGVLKVAVPEDYPPFGSVGPDLKPQGYDIDTAALLAKSMNV
KLELVPVNSANRIPYLQTNKVDLVISSLGKTAEREKVIDFSSAYAPYYQGVFGPADLKVSSPADLTGKTVGATRGALEEI
ALTQMAPNATIKRFEDNNATIAAFLSGQVQLIAAGNIVAAAILAKNPPRRPEPKFVIKNSPCFVGLNKNEPRLQQKVDAA
IAQAKRDGTLNTMSKKWFGTGLPADL
>Mature_265_residues
TCTTAHRPRRAWLATLLLAPLLLAAPLAHADALDNITKSGVLKVAVPEDYPPFGSVGPDLKPQGYDIDTAALLAKSMNVK
LELVPVNSANRIPYLQTNKVDLVISSLGKTAEREKVIDFSSAYAPYYQGVFGPADLKVSSPADLTGKTVGATRGALEEIA
LTQMAPNATIKRFEDNNATIAAFLSGQVQLIAAGNIVAAAILAKNPPRRPEPKFVIKNSPCFVGLNKNEPRLQQKVDAAI
AQAKRDGTLNTMSKKWFGTGLPADL

Specific function: Part of a binding-protein-dependent transport system for cystine [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=262, Percent_Identity=27.4809160305344, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1787088, Length=227, Percent_Identity=25.9911894273128, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1787085, Length=225, Percent_Identity=25.7777777777778, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1787031, Length=223, Percent_Identity=27.8026905829596, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786876, Length=249, Percent_Identity=26.1044176706827, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788649, Length=235, Percent_Identity=24.6808510638298, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788648, Length=227, Percent_Identity=25.5506607929515, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 28384; Mature: 28253

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCTTAHRPRRAWLATLLLAPLLLAAPLAHADALDNITKSGVLKVAVPEDYPPFGSVGPD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC
LKPQGYDIDTAALLAKSMNVKLELVPVNSANRIPYLQTNKVDLVISSLGKTAEREKVIDF
CCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCHHHHHHHHCCHHHHHHHHCC
SSAYAPYYQGVFGPADLKVSSPADLTGKTVGATRGALEEIALTQMAPNATIKRFEDNNAT
HHHCCHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCE
IAAFLSGQVQLIAAGNIVAAAILAKNPPRRPEPKFVIKNSPCFVGLNKNEPRLQQKVDAA
EEEEECCCEEEEEECCHHHHHHHHCCCCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHH
IAQAKRDGTLNTMSKKWFGTGLPADL
HHHHHCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TCTTAHRPRRAWLATLLLAPLLLAAPLAHADALDNITKSGVLKVAVPEDYPPFGSVGPD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC
LKPQGYDIDTAALLAKSMNVKLELVPVNSANRIPYLQTNKVDLVISSLGKTAEREKVIDF
CCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCHHHHHHHHCCHHHHHHHHCC
SSAYAPYYQGVFGPADLKVSSPADLTGKTVGATRGALEEIALTQMAPNATIKRFEDNNAT
HHHCCHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCE
IAAFLSGQVQLIAAGNIVAAAILAKNPPRRPEPKFVIKNSPCFVGLNKNEPRLQQKVDAA
EEEEECCCEEEEEECCHHHHHHHHCCCCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHH
IAQAKRDGTLNTMSKKWFGTGLPADL
HHHHHCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]