Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is 186477000

Identifier: 186477000

GI number: 186477000

Start: 2522302

End: 2523792

Strand: Direct

Name: 186477000

Synonym: Bphy_2249

Alternate gene names: NA

Gene position: 2522302-2523792 (Clockwise)

Preceding gene: 186476999

Following gene: 186477002

Centisome position: 72.5

GC content: 65.59

Gene sequence:

>1491_bases
ATGAAAACATGGTTTCCGTGTCGCGCCTCGGCGCGGCCGCTCGTCGTCGCATTGTTCGCGACAAGCGTCGCGCTGACTGC
ATGTGGCGGTGGAGGCGGCAACGACAGCGGCCTGGACCCGTCTGTCAGCAATGTTGCACCTAATAAGCCGGCGGGTTCGG
CGATCGCGCCTGTGCCGGCGAGTGCAGCGCCGGCAGCGAGTACGCCCGCTGCAGTGACTCCGTCGCCGGCAGTCAGCGCG
CCAGCGGCAGTCACTGCGCCTTCGGCAGCCACGCCTGCGAGCGGGACGGGCACGTCGTCAGGCAGCGAGCAGGTGGCAAG
CACTGGCGGCAGCAAGCCCGACAACACTGAAACGAACGATCTGCCCGCGTCTCCGCCCGTCGCCATCAACACCGTACCGA
TCACGGTCGACAACAAGCTCGACGCCACGATCGTCAATGCGCCCTATGTCAGCGTGACGATCTGCGTGCCGGGCGCACAA
GGCCCGACGCAATGCGCGACCCTCGATCACATGTTGCTCGACACAGGCTCGTCAGGCGTACGGGTGATATCGAGCGCCCT
CGGCGCCGCGCTCGCCGCACGATTGCCCGCACAAACAGGCGCCGGCAACGATCCGACGGGCAACGCAGCCCTCGCCCAAT
GCGCGATTTTCGCGTCGGGCTACACGTGGGGGCCGATAAGGCGCGCGGATGTGAAGATCGGCGGCGAGACGGCGAGCAAC
ATCCCGATTCAGGTCATCGGCGACAGCGGATTCACGTGGACGCCGAATGACTGCACCGCACATGGCGCGTCCAGCATGAA
TGACGTCAAGACGTTGGGCGCGAAAGGGATCGTCGGCATCGGCCATCTGGCGCACGACTTCCCGCAGGCGGCACAAACAG
CGCTCGCGGCCACGTACTACTACTGCCCGACGCCCTGGTCGTGCACCGCCGCGAGCGTGCCGCTCGACAGGCAGACGGCC
AATCCCGTCGCCGCCTTCGCGACCGACAACAACGGCACGGTCATCCGCCTGCCCGCACTACCTGCAACGGGCGAGGCAAG
CGTCACGGGCAAACTGCTGTTCGGCATCGGCACACGCGACAACAACACGTTGCCGTCGAGCGCTACGCGCCTCACCGTGA
CAGACCGAGGGTTGTTCACAACGAACTACAAGGGGCGCACGCTATCGAGCGTCATCGATAGCGGCTCGAACGGACTGTTC
TTCGCTGATTCGACGCTGCCCGTCTTCGGAGGCTGGTACGCGCCGCCCGCCGCGCAAACGCTGAGCGCGTCGATGCTATC
GAATACGGGCAATGCGCAATCGACGGCCTCGTTTGCGATCGCCGATTCGTCGAGCCTCTTCGAGCTCGGCTATGCGGCGC
ACGACAATCTCGGCGCACCGCTGAACAGCATGTTCATGTGGGGCTTGCCGTTCTTCTATGGGCGCAGCGTATATACGGCG
CTGAGCGGCGTGCAGGCGGGACCGCAGACAGGCCCCTACGTGGCGTTCTGA

Upstream 100 bases:

>100_bases
GCGACCTGCAGATCGAGTCCGTCGGACATCAGGGTGCCTTCGCAGGCCGCGCCTGCGTACCGCGGCTCGTGCCCGCCAAC
GTCAACGTGGATGCGTTGCA

Downstream 100 bases:

>100_bases
TCGACAGCGCATCATTCGATGCGCCAGCAACCAACGGCGGATCGGCGTGCAAGCCATCCGCCGTTTTTCATTGCATACCC
CGCGCCCGTGCACAACAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MKTWFPCRASARPLVVALFATSVALTACGGGGGNDSGLDPSVSNVAPNKPAGSAIAPVPASAAPAASTPAAVTPSPAVSA
PAAVTAPSAATPASGTGTSSGSEQVASTGGSKPDNTETNDLPASPPVAINTVPITVDNKLDATIVNAPYVSVTICVPGAQ
GPTQCATLDHMLLDTGSSGVRVISSALGAALAARLPAQTGAGNDPTGNAALAQCAIFASGYTWGPIRRADVKIGGETASN
IPIQVIGDSGFTWTPNDCTAHGASSMNDVKTLGAKGIVGIGHLAHDFPQAAQTALAATYYYCPTPWSCTAASVPLDRQTA
NPVAAFATDNNGTVIRLPALPATGEASVTGKLLFGIGTRDNNTLPSSATRLTVTDRGLFTTNYKGRTLSSVIDSGSNGLF
FADSTLPVFGGWYAPPAAQTLSASMLSNTGNAQSTASFAIADSSSLFELGYAAHDNLGAPLNSMFMWGLPFFYGRSVYTA
LSGVQAGPQTGPYVAF

Sequences:

>Translated_496_residues
MKTWFPCRASARPLVVALFATSVALTACGGGGGNDSGLDPSVSNVAPNKPAGSAIAPVPASAAPAASTPAAVTPSPAVSA
PAAVTAPSAATPASGTGTSSGSEQVASTGGSKPDNTETNDLPASPPVAINTVPITVDNKLDATIVNAPYVSVTICVPGAQ
GPTQCATLDHMLLDTGSSGVRVISSALGAALAARLPAQTGAGNDPTGNAALAQCAIFASGYTWGPIRRADVKIGGETASN
IPIQVIGDSGFTWTPNDCTAHGASSMNDVKTLGAKGIVGIGHLAHDFPQAAQTALAATYYYCPTPWSCTAASVPLDRQTA
NPVAAFATDNNGTVIRLPALPATGEASVTGKLLFGIGTRDNNTLPSSATRLTVTDRGLFTTNYKGRTLSSVIDSGSNGLF
FADSTLPVFGGWYAPPAAQTLSASMLSNTGNAQSTASFAIADSSSLFELGYAAHDNLGAPLNSMFMWGLPFFYGRSVYTA
LSGVQAGPQTGPYVAF
>Mature_496_residues
MKTWFPCRASARPLVVALFATSVALTACGGGGGNDSGLDPSVSNVAPNKPAGSAIAPVPASAAPAASTPAAVTPSPAVSA
PAAVTAPSAATPASGTGTSSGSEQVASTGGSKPDNTETNDLPASPPVAINTVPITVDNKLDATIVNAPYVSVTICVPGAQ
GPTQCATLDHMLLDTGSSGVRVISSALGAALAARLPAQTGAGNDPTGNAALAQCAIFASGYTWGPIRRADVKIGGETASN
IPIQVIGDSGFTWTPNDCTAHGASSMNDVKTLGAKGIVGIGHLAHDFPQAAQTALAATYYYCPTPWSCTAASVPLDRQTA
NPVAAFATDNNGTVIRLPALPATGEASVTGKLLFGIGTRDNNTLPSSATRLTVTDRGLFTTNYKGRTLSSVIDSGSNGLF
FADSTLPVFGGWYAPPAAQTLSASMLSNTGNAQSTASFAIADSSSLFELGYAAHDNLGAPLNSMFMWGLPFFYGRSVYTA
LSGVQAGPQTGPYVAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49705; Mature: 49705

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTWFPCRASARPLVVALFATSVALTACGGGGGNDSGLDPSVSNVAPNKPAGSAIAPVPA
CCCCCCCCCCCCCEEEEEEHHHHEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC
SAAPAASTPAAVTPSPAVSAPAAVTAPSAATPASGTGTSSGSEQVASTGGSKPDNTETND
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
LPASPPVAINTVPITVDNKLDATIVNAPYVSVTICVPGAQGPTQCATLDHMLLDTGSSGV
CCCCCCEEEEEEEEEECCCCCEEEEECCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCHH
RVISSALGAALAARLPAQTGAGNDPTGNAALAQCAIFASGYTWGPIRRADVKIGGETASN
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCEEEEEEEECCCCCCC
IPIQVIGDSGFTWTPNDCTAHGASSMNDVKTLGAKGIVGIGHLAHDFPQAAQTALAATYY
CCEEEECCCCCEECCCCCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHEEEE
YCPTPWSCTAASVPLDRQTANPVAAFATDNNGTVIRLPALPATGEASVTGKLLFGIGTRD
ECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEEEEECCCC
NNTLPSSATRLTVTDRGLFTTNYKGRTLSSVIDSGSNGLFFADSTLPVFGGWYAPPAAQT
CCCCCCCCEEEEEECCCEEEECCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHH
LSASMLSNTGNAQSTASFAIADSSSLFELGYAAHDNLGAPLNSMFMWGLPFFYGRSVYTA
HHHHHHHCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHH
LSGVQAGPQTGPYVAF
HHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTWFPCRASARPLVVALFATSVALTACGGGGGNDSGLDPSVSNVAPNKPAGSAIAPVPA
CCCCCCCCCCCCCEEEEEEHHHHEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC
SAAPAASTPAAVTPSPAVSAPAAVTAPSAATPASGTGTSSGSEQVASTGGSKPDNTETND
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
LPASPPVAINTVPITVDNKLDATIVNAPYVSVTICVPGAQGPTQCATLDHMLLDTGSSGV
CCCCCCEEEEEEEEEECCCCCEEEEECCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCHH
RVISSALGAALAARLPAQTGAGNDPTGNAALAQCAIFASGYTWGPIRRADVKIGGETASN
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCEEEEEEEECCCCCCC
IPIQVIGDSGFTWTPNDCTAHGASSMNDVKTLGAKGIVGIGHLAHDFPQAAQTALAATYY
CCEEEECCCCCEECCCCCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHEEEE
YCPTPWSCTAASVPLDRQTANPVAAFATDNNGTVIRLPALPATGEASVTGKLLFGIGTRD
ECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEEEEECCCC
NNTLPSSATRLTVTDRGLFTTNYKGRTLSSVIDSGSNGLFFADSTLPVFGGWYAPPAAQT
CCCCCCCCEEEEEECCCEEEECCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHH
LSASMLSNTGNAQSTASFAIADSSSLFELGYAAHDNLGAPLNSMFMWGLPFFYGRSVYTA
HHHHHHHCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHH
LSGVQAGPQTGPYVAF
HHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA