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The map label for this gene is ytfM [C]

Identifier: 186476945

GI number: 186476945

Start: 2468621

End: 2470396

Strand: Reverse

Name: ytfM [C]

Synonym: Bphy_2194

Alternate gene names: 186476945

Gene position: 2470396-2468621 (Counterclockwise)

Preceding gene: 186476950

Following gene: 186476944

Centisome position: 71.0

GC content: 66.55

Gene sequence:

>1776_bases
GTGCGGCGCGCATCATTCGCGGCGACGCTGCTGCGCGCCTGTCTGTCGTGCGGCTTCTGCGCGCTGCTGCTGACCACGCA
CGCCTACGCCGCGCGCGCGAAGCCGACCTACAAGGTCGACGTCGAGGCGGAGCCGCGCTCGCTGCGCAAGCTGCTCGAAG
AGCATCTGGACATCTCCCGCTTCGCGAAACGCGACGACATCAGCCCCGAGCAGTTCGACTTCCTCGTCACGGCGACGCCG
CAGCAGGTGCGGGATCTCGCGTCGACGGAAGGCTATTTCACGCCCATCGTGCGGACCGACGTGCGCACCATCGATGACAA
AACAGTGGTGCGCGTGTCCGTCGATCCCGGCCCGCGCACCATCATTTCGTCGGTTTCATTGTCGTTTCGCGGCCCGGTGC
TGACGGAAGACCCCGAGCAGGAGAACAAGACCCGCTTCGCGTTCTCGCTGCACGAGGGCGACCCGTTCACGCAGGACGCC
TGGGACGATGCGAAGGAAGCGTCGCTCAAGGCGCTGCAGTCGCGCCGCTATCTGGGCGCGAAGATCGCGCGTTCGCAAGC
GCGGGTCGATCCGCGCACGCACGACGCGCAGCTGTCCGTCACCTTCGACAGCGGCCCCACGTTCACGATGGGCAAGCTCG
ACGTGTCGGGCCCGCGGCGCTACCCGGAGCGCATTGTAGAAAACGTGAATCCGATCTCGCCGGGCGAAGTCTACGACGTG
CAGCGCGTGACCGAACTGCAGCGCCAGTTGCAGAACACGCCGTATTACGCGAGCGTCGCGATCGACGTCGGCAACGACAC
GGAAAAGCCGCTCGAAACCCCGGTGCACGTGAAGATCAGCGAGTATCCGTACAACAGCGTGCGCGGCGGCGTCGGCTATT
CGACGGACACGGGCGCGCATATCCAGGGCTCGTATTCGTATCTCGACACCTTCGGCGCGGCCTGGCCGTTCACCGTCGCC
GGCCGGCTCGACCAGATCCAGCAGTACGGCCAGGTGACGCTCGCGATGCCGCCCGGCCTGCGCGGCTGGACCAACAGCGC
GCTCGTGTCGTACACCAGCACGAACGTGTCCGACACGCGCATCTACAGCTTGCGGGCAGGCGTGCAGCGCACGCGGACGT
CGCAGTACATCGACTACGCGTATTCGCTCCTCTACTACCAGGACAGGCTGGACCAGAACACCCAGGCGCCGACCACGAGC
AGGGCGCTCGTGCCCGGCTGGTCGTGGACGCGCCGCGATACCGACGACCCGCTGTTCCCGCGCAAGGGCAACCTGATTCA
CGTCGAGGCAGGCTTCGCCGTGAAAGGCGCGCTGACCGACCAGACTTTCATCCGCGGCTATGCGCGCGGACAGCAGTACG
TGCCCGTCGGCACGCGCGACCTGATTCTGTTTCGCGCGGAACTGGGCGGCGTGTTCACCAGCGGCCCGTCGAGCGGCGTG
CCGGCGTCGCTGCTGTTCCGCGCGGGCGGCTCGAATTCGGTGCGCGGCTACGGATATCAGAGTATCGGTAACAACGTCGG
CGGCTCGATCCTGCCGACCAAGTACCTCGTAACGGGCACTTCGGAATATCAGCACTGGTTCAACCGGGACTGGGGCGCAG
CCGTGTTCTTCGACATCGGCACAGCCACCGACGCCTGGGGCGAAAAGGTTTTCTATCCGGGCGTCGGCCTGGGCGCGCGC
TGGCGCAGCCCTGTCGGCCCGGTGAACGTCGATCTCGCGTACGGCACGCGCAACCGCAGCGTGCGGCCGTATCTGACGCT
CGGCATCGCGTTCTGA

Upstream 100 bases:

>100_bases
AACAAATCGTCAAAAGAGCCGGAGGTTGTGTTTGGCGGGGTGGGCCATCGAGCGATCGCGAGAGCGCCGCAGCGAAAACA
CAGTGACGGAGGGTCGCGCC

Downstream 100 bases:

>100_bases
CATCACATTTTTGAGCATGACGACGGATCCATCCGCGAATTCATCCGGGAACACGTCTGGCGGCACACCGCCGGATGGCG
CGCCGCCGCGCGGGCCGGAC

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 591; Mature: 591

Protein sequence:

>591_residues
MRRASFAATLLRACLSCGFCALLLTTHAYAARAKPTYKVDVEAEPRSLRKLLEEHLDISRFAKRDDISPEQFDFLVTATP
QQVRDLASTEGYFTPIVRTDVRTIDDKTVVRVSVDPGPRTIISSVSLSFRGPVLTEDPEQENKTRFAFSLHEGDPFTQDA
WDDAKEASLKALQSRRYLGAKIARSQARVDPRTHDAQLSVTFDSGPTFTMGKLDVSGPRRYPERIVENVNPISPGEVYDV
QRVTELQRQLQNTPYYASVAIDVGNDTEKPLETPVHVKISEYPYNSVRGGVGYSTDTGAHIQGSYSYLDTFGAAWPFTVA
GRLDQIQQYGQVTLAMPPGLRGWTNSALVSYTSTNVSDTRIYSLRAGVQRTRTSQYIDYAYSLLYYQDRLDQNTQAPTTS
RALVPGWSWTRRDTDDPLFPRKGNLIHVEAGFAVKGALTDQTFIRGYARGQQYVPVGTRDLILFRAELGGVFTSGPSSGV
PASLLFRAGGSNSVRGYGYQSIGNNVGGSILPTKYLVTGTSEYQHWFNRDWGAAVFFDIGTATDAWGEKVFYPGVGLGAR
WRSPVGPVNVDLAYGTRNRSVRPYLTLGIAF

Sequences:

>Translated_591_residues
MRRASFAATLLRACLSCGFCALLLTTHAYAARAKPTYKVDVEAEPRSLRKLLEEHLDISRFAKRDDISPEQFDFLVTATP
QQVRDLASTEGYFTPIVRTDVRTIDDKTVVRVSVDPGPRTIISSVSLSFRGPVLTEDPEQENKTRFAFSLHEGDPFTQDA
WDDAKEASLKALQSRRYLGAKIARSQARVDPRTHDAQLSVTFDSGPTFTMGKLDVSGPRRYPERIVENVNPISPGEVYDV
QRVTELQRQLQNTPYYASVAIDVGNDTEKPLETPVHVKISEYPYNSVRGGVGYSTDTGAHIQGSYSYLDTFGAAWPFTVA
GRLDQIQQYGQVTLAMPPGLRGWTNSALVSYTSTNVSDTRIYSLRAGVQRTRTSQYIDYAYSLLYYQDRLDQNTQAPTTS
RALVPGWSWTRRDTDDPLFPRKGNLIHVEAGFAVKGALTDQTFIRGYARGQQYVPVGTRDLILFRAELGGVFTSGPSSGV
PASLLFRAGGSNSVRGYGYQSIGNNVGGSILPTKYLVTGTSEYQHWFNRDWGAAVFFDIGTATDAWGEKVFYPGVGLGAR
WRSPVGPVNVDLAYGTRNRSVRPYLTLGIAF
>Mature_591_residues
MRRASFAATLLRACLSCGFCALLLTTHAYAARAKPTYKVDVEAEPRSLRKLLEEHLDISRFAKRDDISPEQFDFLVTATP
QQVRDLASTEGYFTPIVRTDVRTIDDKTVVRVSVDPGPRTIISSVSLSFRGPVLTEDPEQENKTRFAFSLHEGDPFTQDA
WDDAKEASLKALQSRRYLGAKIARSQARVDPRTHDAQLSVTFDSGPTFTMGKLDVSGPRRYPERIVENVNPISPGEVYDV
QRVTELQRQLQNTPYYASVAIDVGNDTEKPLETPVHVKISEYPYNSVRGGVGYSTDTGAHIQGSYSYLDTFGAAWPFTVA
GRLDQIQQYGQVTLAMPPGLRGWTNSALVSYTSTNVSDTRIYSLRAGVQRTRTSQYIDYAYSLLYYQDRLDQNTQAPTTS
RALVPGWSWTRRDTDDPLFPRKGNLIHVEAGFAVKGALTDQTFIRGYARGQQYVPVGTRDLILFRAELGGVFTSGPSSGV
PASLLFRAGGSNSVRGYGYQSIGNNVGGSILPTKYLVTGTSEYQHWFNRDWGAAVFFDIGTATDAWGEKVFYPGVGLGAR
WRSPVGPVNVDLAYGTRNRSVRPYLTLGIAF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfM [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=578, Percent_Identity=25.0865051903114, Blast_Score=135, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184 [H]

Pfam domain/function: PF01103 Bac_surface_Ag [H]

EC number: NA

Molecular weight: Translated: 65476; Mature: 65476

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRASFAATLLRACLSCGFCALLLTTHAYAARAKPTYKVDVEAEPRSLRKLLEEHLDISR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCHHH
FAKRDDISPEQFDFLVTATPQQVRDLASTEGYFTPIVRTDVRTIDDKTVVRVSVDPGPRT
HHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCEEEEEECCCEECCCCEEEEEEECCCCHH
IISSVSLSFRGPVLTEDPEQENKTRFAFSLHEGDPFTQDAWDDAKEASLKALQSRRYLGA
HHHHCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KIARSQARVDPRTHDAQLSVTFDSGPTFTMGKLDVSGPRRYPERIVENVNPISPGEVYDV
HHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHH
QRVTELQRQLQNTPYYASVAIDVGNDTEKPLETPVHVKISEYPYNSVRGGVGYSTDTGAH
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCE
IQGSYSYLDTFGAAWPFTVAGRLDQIQQYGQVTLAMPPGLRGWTNSALVSYTSTNVSDTR
EECCHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCCCCEE
IYSLRAGVQRTRTSQYIDYAYSLLYYQDRLDQNTQAPTTSRALVPGWSWTRRDTDDPLFP
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC
RKGNLIHVEAGFAVKGALTDQTFIRGYARGQQYVPVGTRDLILFRAELGGVFTSGPSSGV
CCCCEEEEECCCEEECCCCCHHHHHHHHCCCEECCCCCCEEEEEEEHHCCEEECCCCCCC
PASLLFRAGGSNSVRGYGYQSIGNNVGGSILPTKYLVTGTSEYQHWFNRDWGAAVFFDIG
CCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCHHHHHHHCCCCCEEEEEECC
TATDAWGEKVFYPGVGLGARWRSPVGPVNVDLAYGTRNRSVRPYLTLGIAF
CCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MRRASFAATLLRACLSCGFCALLLTTHAYAARAKPTYKVDVEAEPRSLRKLLEEHLDISR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCHHH
FAKRDDISPEQFDFLVTATPQQVRDLASTEGYFTPIVRTDVRTIDDKTVVRVSVDPGPRT
HHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCEEEEEECCCEECCCCEEEEEEECCCCHH
IISSVSLSFRGPVLTEDPEQENKTRFAFSLHEGDPFTQDAWDDAKEASLKALQSRRYLGA
HHHHCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KIARSQARVDPRTHDAQLSVTFDSGPTFTMGKLDVSGPRRYPERIVENVNPISPGEVYDV
HHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHH
QRVTELQRQLQNTPYYASVAIDVGNDTEKPLETPVHVKISEYPYNSVRGGVGYSTDTGAH
HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCE
IQGSYSYLDTFGAAWPFTVAGRLDQIQQYGQVTLAMPPGLRGWTNSALVSYTSTNVSDTR
EECCHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCCCCEE
IYSLRAGVQRTRTSQYIDYAYSLLYYQDRLDQNTQAPTTSRALVPGWSWTRRDTDDPLFP
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCC
RKGNLIHVEAGFAVKGALTDQTFIRGYARGQQYVPVGTRDLILFRAELGGVFTSGPSSGV
CCCCEEEEECCCEEECCCCCHHHHHHHHCCCEECCCCCCEEEEEEEHHCCEEECCCCCCC
PASLLFRAGGSNSVRGYGYQSIGNNVGGSILPTKYLVTGTSEYQHWFNRDWGAAVFFDIG
CCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCHHHHHHHCCCCCEEEEEECC
TATDAWGEKVFYPGVGLGARWRSPVGPVNVDLAYGTRNRSVRPYLTLGIAF
CCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]