| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is dnaJ [C]
Identifier: 186476884
GI number: 186476884
Start: 2395648
End: 2396958
Strand: Reverse
Name: dnaJ [C]
Synonym: Bphy_2133
Alternate gene names: 186476884
Gene position: 2396958-2395648 (Counterclockwise)
Preceding gene: 186476885
Following gene: 186476883
Centisome position: 68.89
GC content: 57.89
Gene sequence:
>1311_bases ATGCACACTCACTACGACAATCTGAAGGTTGCACGCAACGCACCTCATGCGGTCATCAAGGCCGCCTACAAAGCACTAAG TCAGCGATACCACCCGGACAAGAACAATCACCCTGACGCTACTCGCATCATGAAAATCCTGAATGATGCGTGGGCCGTGC TCGGGGATGCCGATGCGCGAGCTACCTATGATCGTCAATTGGCTGCAGAGGAAGCACGAGCCCAAAGCACTACCGAAGAG CCTCAGCAGCAAGCGGATCCACCCCAGCAGTCCGCTCAAACCGCACGAGAGCCTACACAGTCAGGCGACACACCACCACC GCCAGCCGCCGGCTCTAATTTAGGTACGGTGATGAACTGGTATGGCAGCATCAATCGTGGGCAGCGGATCTTTATGTTCG TTGTCGCAAGCATCGCCGCCCTCTTTGGCTTTGGGGGGGAAGGCATGGCGCTCCTCCTGATCCTTCCCTTGCTCCTGCTG ATCTACCTCCAACTTGGCGCACCGAAAAAGACCAACGCGAACGACGAGCGCACCCGTTCAGATACAAGAGCATCCGAGAA CCCTGGTCGCAGGGCATCGAGCGATTCGGAGCCGGAGGCACCGGCGTCAGCCTCCAATCCTCAACCGGACAATCTACGAC CTTCATCCGACCAGCATCGGTCGTCAACTTTTCTTGAGTCGACCGATTGGCTACTCTTAGGGCTGTCCCTAGGGGGTGGG CTATTTATGGTCGTAATGGCCCTCTTTGTGATTACCTGGAGGGATGGGACCCATCCCGACGCACCGCAGAGCGTCGCACC GGCGTTCGTCGCGGCTTCGACTTCCAACGTAGACGTAGCCCCTGCAAGAGCGCAAGCGGCAGCGACAAGCTTTGACTGTA ACAAGGCGCATGGGCCTTCCGAGGTGCTGATCTGCGGCGACGACGATCTTGCTGCAATGGATCGTGCACTAGCGAGCACT TTCGCCCAAGCCAAAGCCGCCACGTCCGACAAGAAGTCCTTCGGGGATACAGCGCGTCGGAATTGGAACTGGCGCAACAA GAATTGCAGGGATAAGGCTTGCCTGGTTGCATGGTACGAAGACGAGCAGCGTTGGCTCCTCGGCGTATTAAATAGTGCGA ACGCTTCAAATGCGACGACTTCGACCTTGAATGCGGTCAATGCGGCTTCTGAGGTAACGAGTTCGACCCTGAGTGCGGTC AATGCGGCTCCGGCTGTGGCGGCCACGGTTCCACAGGATTCGTTGCAACCGGCGAGCGAGGGGGGCGACGTGACGTGTGT GACGTACAGGGGCGAGATAAGCTGTAAATAG
Upstream 100 bases:
>100_bases ACACCCTCATGTCGTGAGGCTAGCAGAGGCTTTTCTTGCCAAGTATGGCCGTACATAGTCAACACACTAACGCGTATCTC GGCAAACGCGACCCAAGAGA
Downstream 100 bases:
>100_bases CCTGTCGTCCAAAAGTTCCATGGCAGTCACGCTCACGCCGCCGTCCGAAAACGGTCATTAACGAACAGTGTGCGGAACAG TGTGCGAAATATAGCTTGCG
Product: heat shock protein DnaJ domain-containing protein
Products: NA
Alternate protein names: Heat Shock Protein DNAJ-Like Protein; Heat Shock Protein DNAJ Domain Protein; DNAJ Family Protein; Heat Shock Protein DNAJ; DNAJ Protein
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MHTHYDNLKVARNAPHAVIKAAYKALSQRYHPDKNNHPDATRIMKILNDAWAVLGDADARATYDRQLAAEEARAQSTTEE PQQQADPPQQSAQTAREPTQSGDTPPPPAAGSNLGTVMNWYGSINRGQRIFMFVVASIAALFGFGGEGMALLLILPLLLL IYLQLGAPKKTNANDERTRSDTRASENPGRRASSDSEPEAPASASNPQPDNLRPSSDQHRSSTFLESTDWLLLGLSLGGG LFMVVMALFVITWRDGTHPDAPQSVAPAFVAASTSNVDVAPARAQAAATSFDCNKAHGPSEVLICGDDDLAAMDRALAST FAQAKAATSDKKSFGDTARRNWNWRNKNCRDKACLVAWYEDEQRWLLGVLNSANASNATTSTLNAVNAASEVTSSTLSAV NAAPAVAATVPQDSLQPASEGGDVTCVTYRGEISCK
Sequences:
>Translated_436_residues MHTHYDNLKVARNAPHAVIKAAYKALSQRYHPDKNNHPDATRIMKILNDAWAVLGDADARATYDRQLAAEEARAQSTTEE PQQQADPPQQSAQTAREPTQSGDTPPPPAAGSNLGTVMNWYGSINRGQRIFMFVVASIAALFGFGGEGMALLLILPLLLL IYLQLGAPKKTNANDERTRSDTRASENPGRRASSDSEPEAPASASNPQPDNLRPSSDQHRSSTFLESTDWLLLGLSLGGG LFMVVMALFVITWRDGTHPDAPQSVAPAFVAASTSNVDVAPARAQAAATSFDCNKAHGPSEVLICGDDDLAAMDRALAST FAQAKAATSDKKSFGDTARRNWNWRNKNCRDKACLVAWYEDEQRWLLGVLNSANASNATTSTLNAVNAASEVTSSTLSAV NAAPAVAATVPQDSLQPASEGGDVTCVTYRGEISCK >Mature_436_residues MHTHYDNLKVARNAPHAVIKAAYKALSQRYHPDKNNHPDATRIMKILNDAWAVLGDADARATYDRQLAAEEARAQSTTEE PQQQADPPQQSAQTAREPTQSGDTPPPPAAGSNLGTVMNWYGSINRGQRIFMFVVASIAALFGFGGEGMALLLILPLLLL IYLQLGAPKKTNANDERTRSDTRASENPGRRASSDSEPEAPASASNPQPDNLRPSSDQHRSSTFLESTDWLLLGLSLGGG LFMVVMALFVITWRDGTHPDAPQSVAPAFVAASTSNVDVAPARAQAAATSFDCNKAHGPSEVLICGDDDLAAMDRALAST FAQAKAATSDKKSFGDTARRNWNWRNKNCRDKACLVAWYEDEQRWLLGVLNSANASNATTSTLNAVNAASEVTSSTLSAV NAAPAVAATVPQDSLQPASEGGDVTCVTYRGEISCK
Specific function: Interacts With Dnak To Disassemble A Protein Complex At The Phage Lambda Origin Of Replication. Stimulates, Jointly With Grpe, The Atpase Activity Of Dnak. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46580; Mature: 46580
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTHYDNLKVARNAPHAVIKAAYKALSQRYHPDKNNHPDATRIMKILNDAWAVLGDADAR CCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH ATYDRQLAAEEARAQSTTEEPQQQADPPQQSAQTAREPTQSGDTPPPPAAGSNLGTVMNW HHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH YGSINRGQRIFMFVVASIAALFGFGGEGMALLLILPLLLLIYLQLGAPKKTNANDERTRS HCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH DTRASENPGRRASSDSEPEAPASASNPQPDNLRPSSDQHRSSTFLESTDWLLLGLSLGGG HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCH LFMVVMALFVITWRDGTHPDAPQSVAPAFVAASTSNVDVAPARAQAAATSFDCNKAHGPS HHHHHHHHHHEECCCCCCCCCCHHHCCHHEEECCCCCCCCCCHHHHHHCCCCCCCCCCCC EVLICGDDDLAAMDRALASTFAQAKAATSDKKSFGDTARRNWNWRNKNCRDKACLVAWYE EEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHCCCCCCCCCCCCCEEEEEEEE DEQRWLLGVLNSANASNATTSTLNAVNAASEVTSSTLSAVNAAPAVAATVPQDSLQPASE CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHCCCCCC GGDVTCVTYRGEISCK CCCEEEEEECCCCCCC >Mature Secondary Structure MHTHYDNLKVARNAPHAVIKAAYKALSQRYHPDKNNHPDATRIMKILNDAWAVLGDADAR CCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH ATYDRQLAAEEARAQSTTEEPQQQADPPQQSAQTAREPTQSGDTPPPPAAGSNLGTVMNW HHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH YGSINRGQRIFMFVVASIAALFGFGGEGMALLLILPLLLLIYLQLGAPKKTNANDERTRS HCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH DTRASENPGRRASSDSEPEAPASASNPQPDNLRPSSDQHRSSTFLESTDWLLLGLSLGGG HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCH LFMVVMALFVITWRDGTHPDAPQSVAPAFVAASTSNVDVAPARAQAAATSFDCNKAHGPS HHHHHHHHHHEECCCCCCCCCCHHHCCHHEEECCCCCCCCCCHHHHHHCCCCCCCCCCCC EVLICGDDDLAAMDRALASTFAQAKAATSDKKSFGDTARRNWNWRNKNCRDKACLVAWYE EEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHCCCCCCCCCCCCCEEEEEEEE DEQRWLLGVLNSANASNATTSTLNAVNAASEVTSSTLSAVNAAPAVAATVPQDSLQPASE CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHCCCCCC GGDVTCVTYRGEISCK CCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA