| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476882
Identifier: 186476882
GI number: 186476882
Start: 2393721
End: 2394524
Strand: Reverse
Name: 186476882
Synonym: Bphy_2131
Alternate gene names: NA
Gene position: 2394524-2393721 (Counterclockwise)
Preceding gene: 186476883
Following gene: 186476881
Centisome position: 68.82
GC content: 53.23
Gene sequence:
>804_bases ATGACAGACGGTTTTTACGCGACTAAGCAAGTGGTCGAAGCCAGCATTGCGGCTAACCCGATTCCGACTACGAAGAGGCC CACTAAGCTAATCCTCGAACACATTCTGACCAAGGAAGAGCTGTTTCAGCATCGACTGCCGAAAGACTGGGACAGCAACA AGCACGTATCGGTCTTGAAAAGGGTTGTGAAGGGTGGTGACACCCTAGAACCGCTGACCGTATTCTGGACGGGCGATGGC TGGACATGCATTGATGGGCACCACCGGGTTGCTGCGTATGTCGAAGCTGGTTTCAGTGGCAAAGTTCCGGTGAGCGTGTT CGAAGGAACGCTGGACGAGGCTATCGGCCAAGCGGCGCTGAGCAACACGCACGACAAGCTGCCGATGTCATCTTCAGAGA AAACAAATGCGGCATGGCGACTGACTGTCCTCACCGACCTATCCATTAAAGCCGTGCACAACTCAACGACCGTAGCGCCT TCTCGCATAAGCGTCATGCGGAAGGTCCGGGAATTCATCGTTGAGAGATATAGTAAAGATTACGCGGCGGAGTTGAGGTG GCAGGATGCATGGAGCCTCTGGAAGGGGGACCAACAGGATGACGATGTCGGGTCTGATGGATGGATCGAACGTGAAGCCC AAAAGCTGGCAGAGCGGTTGATTAAGAAGTTTGGTAAGGAACTAGGACGAAATGCCGAAGTCACGTGGAGAGCACTGGAA ATATATAGCCCGAATCTAGCGGAACACATCTGCGCTCATCTAGGTGTGGCGTGGAATGATCCTGAAGGGGAGCAGGAATT CTAA
Upstream 100 bases:
>100_bases CTCATGGGTCTCCTTTGCTTGAAGAGGAAAAGGGGATAAGATGGCGGCCCCTGTATATCGCCTCTCCTTTTAGGATAGGC CTAGAATCTGCCCCTAATTT
Downstream 100 bases:
>100_bases GTCTGTAGGATGTTTGTTGAACCTCAGACCACTGCTTTAGACAGCCATCGCAGCAAGGTTTCGAGCGAATGTCCCGCCCC GTACTTGCTTGATTGGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: ParB Domain Protein Nuclease
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTDGFYATKQVVEASIAANPIPTTKRPTKLILEHILTKEELFQHRLPKDWDSNKHVSVLKRVVKGGDTLEPLTVFWTGDG WTCIDGHHRVAAYVEAGFSGKVPVSVFEGTLDEAIGQAALSNTHDKLPMSSSEKTNAAWRLTVLTDLSIKAVHNSTTVAP SRISVMRKVREFIVERYSKDYAAELRWQDAWSLWKGDQQDDDVGSDGWIEREAQKLAERLIKKFGKELGRNAEVTWRALE IYSPNLAEHICAHLGVAWNDPEGEQEF
Sequences:
>Translated_267_residues MTDGFYATKQVVEASIAANPIPTTKRPTKLILEHILTKEELFQHRLPKDWDSNKHVSVLKRVVKGGDTLEPLTVFWTGDG WTCIDGHHRVAAYVEAGFSGKVPVSVFEGTLDEAIGQAALSNTHDKLPMSSSEKTNAAWRLTVLTDLSIKAVHNSTTVAP SRISVMRKVREFIVERYSKDYAAELRWQDAWSLWKGDQQDDDVGSDGWIEREAQKLAERLIKKFGKELGRNAEVTWRALE IYSPNLAEHICAHLGVAWNDPEGEQEF >Mature_266_residues TDGFYATKQVVEASIAANPIPTTKRPTKLILEHILTKEELFQHRLPKDWDSNKHVSVLKRVVKGGDTLEPLTVFWTGDGW TCIDGHHRVAAYVEAGFSGKVPVSVFEGTLDEAIGQAALSNTHDKLPMSSSEKTNAAWRLTVLTDLSIKAVHNSTTVAPS RISVMRKVREFIVERYSKDYAAELRWQDAWSLWKGDQQDDDVGSDGWIEREAQKLAERLIKKFGKELGRNAEVTWRALEI YSPNLAEHICAHLGVAWNDPEGEQEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30054; Mature: 29923
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDGFYATKQVVEASIAANPIPTTKRPTKLILEHILTKEELFQHRLPKDWDSNKHVSVLK CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH RVVKGGDTLEPLTVFWTGDGWTCIDGHHRVAAYVEAGFSGKVPVSVFEGTLDEAIGQAAL HHHHCCCCCCCEEEEECCCCEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH SNTHDKLPMSSSEKTNAAWRLTVLTDLSIKAVHNSTTVAPSRISVMRKVREFIVERYSKD HCCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCHH YAAELRWQDAWSLWKGDQQDDDVGSDGWIEREAQKLAERLIKKFGKELGRNAEVTWRALE HHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE IYSPNLAEHICAHLGVAWNDPEGEQEF ECCCCHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TDGFYATKQVVEASIAANPIPTTKRPTKLILEHILTKEELFQHRLPKDWDSNKHVSVLK CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH RVVKGGDTLEPLTVFWTGDGWTCIDGHHRVAAYVEAGFSGKVPVSVFEGTLDEAIGQAAL HHHHCCCCCCCEEEEECCCCEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH SNTHDKLPMSSSEKTNAAWRLTVLTDLSIKAVHNSTTVAPSRISVMRKVREFIVERYSKD HCCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCHH YAAELRWQDAWSLWKGDQQDDDVGSDGWIEREAQKLAERLIKKFGKELGRNAEVTWRALE HHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE IYSPNLAEHICAHLGVAWNDPEGEQEF ECCCCHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA