| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is fabG [H]
Identifier: 186476816
GI number: 186476816
Start: 2313679
End: 2314458
Strand: Reverse
Name: fabG [H]
Synonym: Bphy_2062
Alternate gene names: 186476816
Gene position: 2314458-2313679 (Counterclockwise)
Preceding gene: 186476829
Following gene: 186476815
Centisome position: 66.52
GC content: 68.08
Gene sequence:
>780_bases ATGGATCTGGGCATCGCAGGAAAATCCGCGCTCGTGTGCGCGGCGAGCAAGGGGCTGGGGCGCGGCTGCGCCGAGGCGCT CGCGGCCGAAGGCGTGAATGTGACGATCGTCGCGCGCACGCCTGAAACGCTCGACGCGACGGCGGCCGCAATCCGCGCGA ACGCGGGCGTCGACGTGCAGGCCGTCGCGTGCGACATCACCACGCCCGAAGGCCGCGCCGCGGCGCTCGCCGCCTGTCCG CAGCCGGATATTCTCGTCAACAATGCAGGCGGGCCGCCGCCCGGCGATTTCCGCAACTTCACGCACGACGACTGGATCCG CGCGCTCGAAGCGAACATGCTGACGCCGATCGAACTGATCCGTGCGACCATCGACGGGATGATTTCGCGCGGCTTCGGGC GCGTGGTGAACATCACGAGTTCGTCGGTGAAAGCGCCCATCGACGTGCTCGGTCTGTCGAACGGCGCGCGTTCCGGGCTG ACGGGCTTCATTGCGGGCGTCGCGCGCAAGGTCGCGCCGAACGGCGTGACGATCAACAACCTGCTGCCGGGTATTTTCGA CACGGACCGCATTGCCGTGACGTTCGACGCCGCGGCGAAAGCGCAGAACATTTCCGTCGACGAGGCGCGCAAGCAGCGCA TGGCGACGATTCCCGCGCGCCGCTTCGGCACGCCAGACGAGTTCGGCCGCGCCTGCGCGTTCCTGTGCAGCGTGCACGCG GGCTATATCACGGGACAGAACTGGCTGATCGACGGCGGCGCCTACCCGGGCACGTATTGA
Upstream 100 bases:
>100_bases CGCATCGATTCTTCTAGAATCGGGGGACAGTTGACCGACCAACCCGGCGCCAATGCGCGACAGCTTGCCCGCATTGCGCC CATGACAACAGGAACAGGCA
Downstream 100 bases:
>100_bases CGTGGCGCGTCGCGCCACATGCGAACCCCTAAAACGACAATACACGACCACAACAGAAGAGGAGCAACGACATGACAACA CGCGTCGCGCTGATCGCGCA
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MDLGIAGKSALVCAASKGLGRGCAEALAAEGVNVTIVARTPETLDATAAAIRANAGVDVQAVACDITTPEGRAAALAACP QPDILVNNAGGPPPGDFRNFTHDDWIRALEANMLTPIELIRATIDGMISRGFGRVVNITSSSVKAPIDVLGLSNGARSGL TGFIAGVARKVAPNGVTINNLLPGIFDTDRIAVTFDAAAKAQNISVDEARKQRMATIPARRFGTPDEFGRACAFLCSVHA GYITGQNWLIDGGAYPGTY
Sequences:
>Translated_259_residues MDLGIAGKSALVCAASKGLGRGCAEALAAEGVNVTIVARTPETLDATAAAIRANAGVDVQAVACDITTPEGRAAALAACP QPDILVNNAGGPPPGDFRNFTHDDWIRALEANMLTPIELIRATIDGMISRGFGRVVNITSSSVKAPIDVLGLSNGARSGL TGFIAGVARKVAPNGVTINNLLPGIFDTDRIAVTFDAAAKAQNISVDEARKQRMATIPARRFGTPDEFGRACAFLCSVHA GYITGQNWLIDGGAYPGTY >Mature_259_residues MDLGIAGKSALVCAASKGLGRGCAEALAAEGVNVTIVARTPETLDATAAAIRANAGVDVQAVACDITTPEGRAAALAACP QPDILVNNAGGPPPGDFRNFTHDDWIRALEANMLTPIELIRATIDGMISRGFGRVVNITSSSVKAPIDVLGLSNGARSGL TGFIAGVARKVAPNGVTINNLLPGIFDTDRIAVTFDAAAKAQNISVDEARKQRMATIPARRFGTPDEFGRACAFLCSVHA GYITGQNWLIDGGAYPGTY
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=255, Percent_Identity=28.6274509803922, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI5031737, Length=253, Percent_Identity=26.8774703557312, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI7705925, Length=256, Percent_Identity=27.734375, Blast_Score=88, Evalue=6e-18, Organism=Homo sapiens, GI19923817, Length=265, Percent_Identity=27.5471698113208, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI40254992, Length=257, Percent_Identity=26.4591439688716, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI33667109, Length=190, Percent_Identity=28.9473684210526, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI226371731, Length=184, Percent_Identity=27.7173913043478, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI126723750, Length=259, Percent_Identity=25.4826254826255, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI66933014, Length=197, Percent_Identity=24.8730964467005, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI126723191, Length=193, Percent_Identity=27.4611398963731, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI15277342, Length=267, Percent_Identity=27.3408239700375, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1787335, Length=259, Percent_Identity=33.2046332046332, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI87082100, Length=259, Percent_Identity=30.8880308880309, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788459, Length=252, Percent_Identity=26.984126984127, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI87082160, Length=258, Percent_Identity=26.7441860465116, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787905, Length=258, Percent_Identity=25.968992248062, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1789208, Length=261, Percent_Identity=28.735632183908, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1790717, Length=256, Percent_Identity=23.828125, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI2367365, Length=251, Percent_Identity=26.2948207171315, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=24.7058823529412, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17560676, Length=257, Percent_Identity=31.1284046692607, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17561402, Length=255, Percent_Identity=26.6666666666667, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI193204405, Length=267, Percent_Identity=28.8389513108614, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562910, Length=264, Percent_Identity=27.6515151515151, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17538480, Length=274, Percent_Identity=28.4671532846715, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=27.9245283018868, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=29.7709923664122, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17551412, Length=273, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17559104, Length=271, Percent_Identity=29.520295202952, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17538486, Length=266, Percent_Identity=29.3233082706767, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17560332, Length=264, Percent_Identity=29.1666666666667, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17563726, Length=263, Percent_Identity=28.1368821292776, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17508651, Length=255, Percent_Identity=27.843137254902, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17562906, Length=269, Percent_Identity=28.6245353159851, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17560220, Length=263, Percent_Identity=26.9961977186312, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17565030, Length=261, Percent_Identity=28.3524904214559, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=26.984126984127, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI72000259, Length=262, Percent_Identity=28.2442748091603, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17562990, Length=262, Percent_Identity=27.8625954198473, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=27.9245283018868, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71994604, Length=252, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17555706, Length=257, Percent_Identity=25.2918287937743, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21355319, Length=254, Percent_Identity=27.5590551181102, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI23397609, Length=261, Percent_Identity=30.2681992337165, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24639444, Length=266, Percent_Identity=30.0751879699248, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI21357041, Length=256, Percent_Identity=30.078125, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24643142, Length=249, Percent_Identity=24.4979919678715, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI28571526, Length=257, Percent_Identity=28.7937743190661, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26721; Mature: 26721
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLGIAGKSALVCAASKGLGRGCAEALAAEGVNVTIVARTPETLDATAAAIRANAGVDVQ CCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCEEE AVACDITTPEGRAAALAACPQPDILVNNAGGPPPGDFRNFTHDDWIRALEANMLTPIELI EEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHH RATIDGMISRGFGRVVNITSSSVKAPIDVLGLSNGARSGLTGFIAGVARKVAPNGVTINN HHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEHHH LLPGIFDTDRIAVTFDAAAKAQNISVDEARKQRMATIPARRFGTPDEFGRACAFLCSVHA CCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHC GYITGQNWLIDGGAYPGTY CEEECCCEEEECCCCCCCC >Mature Secondary Structure MDLGIAGKSALVCAASKGLGRGCAEALAAEGVNVTIVARTPETLDATAAAIRANAGVDVQ CCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCEEE AVACDITTPEGRAAALAACPQPDILVNNAGGPPPGDFRNFTHDDWIRALEANMLTPIELI EEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHH RATIDGMISRGFGRVVNITSSSVKAPIDVLGLSNGARSGLTGFIAGVARKVAPNGVTINN HHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEHHH LLPGIFDTDRIAVTFDAAAKAQNISVDEARKQRMATIPARRFGTPDEFGRACAFLCSVHA CCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHC GYITGQNWLIDGGAYPGTY CEEECCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]