The gene/protein map for NC_010622 is currently unavailable.
Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is ygfF [H]

Identifier: 186476787

GI number: 186476787

Start: 2282987

End: 2283733

Strand: Direct

Name: ygfF [H]

Synonym: Bphy_2032

Alternate gene names: 186476787

Gene position: 2282987-2283733 (Clockwise)

Preceding gene: 186476786

Following gene: 186476788

Centisome position: 65.62

GC content: 70.01

Gene sequence:

>747_bases
ATGACGAAAGTGGTTCTGATCACGGGCGCGAGCCGCGGCATCGGCCGCGCGACGGCGCGCCTGCTCGGCGCGCGCGGCTG
GTCCGTCGGCGTGAACTACGCGAGCAACGAAGCGGCCGCAAAAGAAACGGCCGCCGAAGTCGGACGTGCGGGCGGGCACG
CACGCCTGATCGCGGGCGACGTCGCCGACGAAGCGCAGGTCGTCGCGATGTTCGACGCGCTGGAACAGGCCTATGGGCGC
ATCGACGCGCTCGTGAACAACGCCGGCATCGTCGCGCCTTCGATGCCGCTCGCCGACATGGACGCGGCGCGTCTGAAGCG
CATGTTCGACGTCAACGTGTACGGCGCGTACCTTTGCGCACGCGAAGCGGCCCGGCGCATGTCGAAAGACCGCGGCGGGC
ATGGCGGCGCGATCGTGAACGTGTCGTCGGCGGCGTCGCGGCTCGGCTCGCCCAACGAGTACGTCGATTACGCCGGCTCG
AAAGGCGCCGTCGACACGATGACCATCGGTCTCGCGAAGGAACTCGGGCCGCAAGGCATTCGGGTGAACGCCGTTCGCCC
CGGACTGATCGACACCGACATCCACGCGAGCGGCGGCCGTCCCGACCGCGCCGCGGTGCTCGGCGCGCAGACGCCGCTCG
GCCGTCCCGGAACGGCCGACGAAGTCGCCGAAGCCATCGTCTGGTTGTTGGGCGACGCGTCGTCGTATGTGAACGGCGCA
CTGCTCGACGTCAGCGCCGGCCGCTGA

Upstream 100 bases:

>100_bases
CTGCAACGCTATCAGCCGCCTTTGCAGGACAAATGGGCGGACCGGCGCGAGCGCGTCTGACGCACGCCTCGCTCATGCGC
TTCACCAGCCGGGAGGACAC

Downstream 100 bases:

>100_bases
CGCACCCGTCTTCCCTCTTCCTTCCCCGCAGAATGCACGGCGCTTCGTCAGAAGCGGCGTGCGTCAGCGCGCTTTCTCTT
TTTCGCGCTTTACCAACGCT

Product: glucose-1-dehydrogenase

Products: D-glucono-1,5-lactone; NADH; NADPH; H+

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MTKVVLITGASRGIGRATARLLGARGWSVGVNYASNEAAAKETAAEVGRAGGHARLIAGDVADEAQVVAMFDALEQAYGR
IDALVNNAGIVAPSMPLADMDAARLKRMFDVNVYGAYLCAREAARRMSKDRGGHGGAIVNVSSAASRLGSPNEYVDYAGS
KGAVDTMTIGLAKELGPQGIRVNAVRPGLIDTDIHASGGRPDRAAVLGAQTPLGRPGTADEVAEAIVWLLGDASSYVNGA
LLDVSAGR

Sequences:

>Translated_248_residues
MTKVVLITGASRGIGRATARLLGARGWSVGVNYASNEAAAKETAAEVGRAGGHARLIAGDVADEAQVVAMFDALEQAYGR
IDALVNNAGIVAPSMPLADMDAARLKRMFDVNVYGAYLCAREAARRMSKDRGGHGGAIVNVSSAASRLGSPNEYVDYAGS
KGAVDTMTIGLAKELGPQGIRVNAVRPGLIDTDIHASGGRPDRAAVLGAQTPLGRPGTADEVAEAIVWLLGDASSYVNGA
LLDVSAGR
>Mature_247_residues
TKVVLITGASRGIGRATARLLGARGWSVGVNYASNEAAAKETAAEVGRAGGHARLIAGDVADEAQVVAMFDALEQAYGRI
DALVNNAGIVAPSMPLADMDAARLKRMFDVNVYGAYLCAREAARRMSKDRGGHGGAIVNVSSAASRLGSPNEYVDYAGSK
GAVDTMTIGLAKELGPQGIRVNAVRPGLIDTDIHASGGRPDRAAVLGAQTPLGRPGTADEVAEAIVWLLGDASSYVNGAL
LDVSAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI40254992, Length=247, Percent_Identity=36.8421052631579, Blast_Score=119, Evalue=2e-27,
Organism=Homo sapiens, GI7705925, Length=250, Percent_Identity=34.4, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI109715829, Length=236, Percent_Identity=33.0508474576271, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI10190704, Length=248, Percent_Identity=32.258064516129, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI15277342, Length=250, Percent_Identity=28, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI4758504, Length=255, Percent_Identity=30.1960784313725, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI59889578, Length=200, Percent_Identity=33, Blast_Score=84, Evalue=8e-17,
Organism=Homo sapiens, GI31542939, Length=201, Percent_Identity=34.3283582089552, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI210032110, Length=193, Percent_Identity=30.5699481865285, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI19923817, Length=257, Percent_Identity=28.0155642023346, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI20149619, Length=239, Percent_Identity=30.1255230125523, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI32483357, Length=259, Percent_Identity=28.957528957529, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI142976729, Length=194, Percent_Identity=30.9278350515464, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI66933014, Length=186, Percent_Identity=32.258064516129, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI40254986, Length=254, Percent_Identity=28.3464566929134, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI83715985, Length=255, Percent_Identity=28.2352941176471, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI224922801, Length=183, Percent_Identity=32.7868852459016, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI5031737, Length=247, Percent_Identity=31.1740890688259, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4503301, Length=215, Percent_Identity=26.5116279069767, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=53.8775510204082, Blast_Score=268, Evalue=3e-73,
Organism=Escherichia coli, GI1788459, Length=250, Percent_Identity=36, Blast_Score=138, Evalue=4e-34,
Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=33.8775510204082, Blast_Score=121, Evalue=3e-29,
Organism=Escherichia coli, GI1789378, Length=247, Percent_Identity=32.7935222672065, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI2367365, Length=239, Percent_Identity=36.8200836820084, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1790717, Length=248, Percent_Identity=33.4677419354839, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1787905, Length=245, Percent_Identity=33.8775510204082, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=30.8, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1789057, Length=262, Percent_Identity=27.8625954198473, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI87082100, Length=245, Percent_Identity=32.6530612244898, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1786812, Length=251, Percent_Identity=31.8725099601594, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=29.4354838709677, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1787526, Length=251, Percent_Identity=27.0916334661355, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787891, Length=247, Percent_Identity=27.9352226720648, Blast_Score=65, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=37.5494071146245, Blast_Score=127, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI71994600, Length=257, Percent_Identity=36.5758754863813, Blast_Score=126, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=36.1788617886179, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI25147288, Length=246, Percent_Identity=32.9268292682927, Blast_Score=97, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17560150, Length=250, Percent_Identity=31.6, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17565030, Length=255, Percent_Identity=31.3725490196078, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17531453, Length=257, Percent_Identity=31.5175097276265, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI17536651, Length=255, Percent_Identity=30.1960784313725, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17538182, Length=250, Percent_Identity=30.8, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17536025, Length=257, Percent_Identity=31.5175097276265, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17559104, Length=259, Percent_Identity=29.3436293436293, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17560332, Length=260, Percent_Identity=32.3076923076923, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17562910, Length=260, Percent_Identity=31.5384615384615, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=31.3008130081301, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17562906, Length=256, Percent_Identity=31.640625, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17544670, Length=246, Percent_Identity=30.8943089430894, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17562904, Length=243, Percent_Identity=30.0411522633745, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17538480, Length=252, Percent_Identity=30.952380952381, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17562990, Length=250, Percent_Identity=30.4, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17563726, Length=238, Percent_Identity=30.2521008403361, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI72000259, Length=255, Percent_Identity=31.3725490196078, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17561402, Length=251, Percent_Identity=29.8804780876494, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17560676, Length=249, Percent_Identity=29.3172690763052, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17538486, Length=261, Percent_Identity=30.6513409961686, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17562908, Length=205, Percent_Identity=33.1707317073171, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17560220, Length=207, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17551412, Length=252, Percent_Identity=30.1587301587302, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17558628, Length=195, Percent_Identity=34.3589743589744, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI193204405, Length=255, Percent_Identity=30.5882352941176, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17561272, Length=218, Percent_Identity=29.3577981651376, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71982365, Length=197, Percent_Identity=30.9644670050761, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17508895, Length=204, Percent_Identity=29.9019607843137, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17564282, Length=193, Percent_Identity=31.6062176165803, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17555612, Length=222, Percent_Identity=31.0810810810811, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193203117, Length=192, Percent_Identity=30.2083333333333, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193203115, Length=192, Percent_Identity=30.2083333333333, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=254, Percent_Identity=28.740157480315, Blast_Score=81, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6322226, Length=198, Percent_Identity=28.2828282828283, Blast_Score=79, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6323882, Length=236, Percent_Identity=33.0508474576271, Blast_Score=75, Evalue=7e-15,
Organism=Saccharomyces cerevisiae, GI6322227, Length=200, Percent_Identity=29, Blast_Score=73, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6322861, Length=193, Percent_Identity=30.0518134715026, Blast_Score=71, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571526, Length=253, Percent_Identity=38.7351778656126, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI23397609, Length=254, Percent_Identity=35.8267716535433, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=36.5079365079365, Blast_Score=120, Evalue=6e-28,
Organism=Drosophila melanogaster, GI21357041, Length=252, Percent_Identity=36.5079365079365, Blast_Score=120, Evalue=8e-28,
Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=36.4, Blast_Score=114, Evalue=8e-26,
Organism=Drosophila melanogaster, GI24644337, Length=198, Percent_Identity=35.8585858585859, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24643142, Length=241, Percent_Identity=33.195020746888, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI21355319, Length=245, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24641232, Length=200, Percent_Identity=33.5, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281364494, Length=203, Percent_Identity=33.9901477832512, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI17737361, Length=254, Percent_Identity=31.1023622047244, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24640492, Length=194, Percent_Identity=29.3814432989691, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24648693, Length=239, Percent_Identity=28.0334728033473, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21355889, Length=239, Percent_Identity=28.0334728033473, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24663911, Length=246, Percent_Identity=30.0813008130081, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21357673, Length=204, Percent_Identity=30.3921568627451, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24641388, Length=240, Percent_Identity=30.8333333333333, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI28571387, Length=239, Percent_Identity=32.2175732217573, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI281364892, Length=223, Percent_Identity=30.0448430493274, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI116007234, Length=237, Percent_Identity=31.2236286919831, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI116007236, Length=241, Percent_Identity=27.8008298755187, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24584752, Length=192, Percent_Identity=31.25, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221510726, Length=192, Percent_Identity=31.25, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.1.1.47

Molecular weight: Translated: 25430; Mature: 25299

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MTKVVLITGASRGIGRATARLLGARGWSVGVNYASNEAAAKETAAEVGRAGGHARLIAGD
CCEEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECC
VADEAQVVAMFDALEQAYGRIDALVNNAGIVAPSMPLADMDAARLKRMFDVNVYGAYLCA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHCCHHHHHHHHH
REAARRMSKDRGGHGGAIVNVSSAASRLGSPNEYVDYAGSKGAVDTMTIGLAKELGPQGI
HHHHHHHHHCCCCCCCEEEEEHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCE
RVNAVRPGLIDTDIHASGGRPDRAAVLGAQTPLGRPGTADEVAEAIVWLLGDASSYVNGA
EEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCE
LLDVSAGR
EEEECCCC
>Mature Secondary Structure 
TKVVLITGASRGIGRATARLLGARGWSVGVNYASNEAAAKETAAEVGRAGGHARLIAGD
CEEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECC
VADEAQVVAMFDALEQAYGRIDALVNNAGIVAPSMPLADMDAARLKRMFDVNVYGAYLCA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHCCHHHHHHHHH
REAARRMSKDRGGHGGAIVNVSSAASRLGSPNEYVDYAGSKGAVDTMTIGLAKELGPQGI
HHHHHHHHHCCCCCCCEEEEEHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCE
RVNAVRPGLIDTDIHASGGRPDRAAVLGAQTPLGRPGTADEVAEAIVWLLGDASSYVNGA
EEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCE
LLDVSAGR
EEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: beta-D-glucose; NAD+; NADP+

Specific reaction: beta-D-glucose + NAD(P)+ = D-glucono-1,5-lactone + NAD(P)H + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 7764507 [H]