| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is ilvI [H]
Identifier: 186476777
GI number: 186476777
Start: 2273638
End: 2275395
Strand: Reverse
Name: ilvI [H]
Synonym: Bphy_2022
Alternate gene names: 186476777
Gene position: 2275395-2273638 (Counterclockwise)
Preceding gene: 186476789
Following gene: 186476776
Centisome position: 65.4
GC content: 62.17
Gene sequence:
>1758_bases ATGCCCAGCGCGGAATTCTCCACGTCGGATACCACACCACACCACGAAGCCGACTCTATCGGCGCCACCGTGCTCATGAA GGCACTGGCCGACGAAGAAGTCGAATTCGTCTGGGGCTATCCCGGCGGCTCGGTACTCTACATCTACGACGAGCTTTACA AGCAGGACAAATTCCAGCACGTCCTCGTGCGCCACGAGCAGGCCGCAGTCCACGCCGCTGACGCCTACGCACGCTCGACC GGCAAGGTCGGCGTCTGCCTCGTGACCTCCGGGCCCGGCGTCACCAATGCCGTGACGGGCATCGCGACGGCCTATATGGA TTCGATCCCTATGGTCGTCATCAGCGGCCAGGTGCCGACTGCCGCGATCGGCCAGGATGCGTTCCAGGAGTGCGACACGG TCGGCATCACGCGTCCCTGCGTGAAACACAACTTCCTCGTGAAGGACGTGCGCGATCTTGCCGCCACCGTCAAGAAAGCT TTCTACATCGCCCGAACCGGCCGTCCCGGCCCGGTGCTGATCGACATTCCGAAAGACGTGTCGAAGGCGCCGTGCCAGTA CGAACCGATCAAGAGCGTGTCGCTGCGCTCGTACAACCCGGTCACGAAGGGCCATTCGGGCCAGATCCGCAAGGCCGTGG CGCTGCTGCTGTCCGCCAGGCGCCCCTACATCTATACGGGCGGCGGCATCATCCTCGCGGATGCGTCGCGCGAACTGAAC CAGTTCGCCGATCTGCTCGGCTATCCCGTCACGAACACGCTGATGGGACTGGGCGGCTACCGCGCGAGCGACAAGAAATT TCTCGGCATGCTCGGCATGCACGGCACGTACGAAGCCAACATGGCGATGCAGCACTGCGACGTGCTGATCGCGATCGGCG CGCGTTTCGACGACCGCGTGATCGGCGATCCGAGCCACTTCGCATCGCGCCCGCGCAAGATCATCCACATCGACATCGAC CCGTCGTCGATTTCGAAGCGCGTGAAGGTCGATATCCCGATCGTCGGCGACGTGAAGGAAGTGCTGAAGGAACTGATCGA GCAATTGCAGACGGCCGAGCATGGCCCCGACACGGCGGCGCTCGCCGACTGGTGGAAGGACATCGAAGCCTGGCGTGCGA AAGACTGCCTGAAGTTCGACCGCGAGAGCGACATCATCAAGCCGCAATACGTGGTGGAAAAGGCGTGGGAACTGACGGAC GGCAATGCCTTCGTGTGTTCCGACGTCGGTCAGCACCAGATGTGGGCGGCACAGTTCTATCGCTTCAACAAGCCGCGTCG CTGGATCAATTCCGGTGGTCTCGGCACGATGGGCTTCGGCCTGCCGGCGGCGATGGGCGTGAAGATGGCGCACCCGGACG ACGACGTGCTCTGCATCACGGGCGAAGGCTCGATCCAGATGTGCATCCAGGAGCTGTCCACCTGCAAGCAGTATGAGACG CCCGTCAAGATCATCTCGCTCAACAACCGCTATCTGGGCATGGTGCGCCAGTGGCAGCAGATCGAATACAGCAAGCGCTA TTCGCATTCCTACATGGATGCGCTGCCCGATTTCGTGAAGCTCGCCGAAGCGTACGGCCACGTCGGCATGCGGATCGAAA AGACCGCCGACGTGGAACCGGCGCTGAAGGAAGCGCTGCGCCTGAAAGACCGCACGGTGTTTCTCGACTTCCAGACCGAT CCGACCGAAAACGTCTGGCCGATGGTTCAGGCCGGCAAGGGCATCACGGAGATGCTCCTCGGGTCGGAAGATCTATAA
Upstream 100 bases:
>100_bases TTCCTGTCAAACTGGACGCGCCGCTTGAACCCGAGCCACAAGCCCGGCAGAGAGCACCCGATCAATTTTTTGCCGAAAAT TCGAAAGGTGAACGATGAAT
Downstream 100 bases:
>100_bases CGAGCGCTTTCCGGCGCCGGCTACGTCGTGCGCGTCTCCACGAAAGACGGGAGCGGACGTAGCGGCGCGGACAGCACGCA TCGCATACATCGACATCTGG
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 585; Mature: 584
Protein sequence:
>585_residues MPSAEFSTSDTTPHHEADSIGATVLMKALADEEVEFVWGYPGGSVLYIYDELYKQDKFQHVLVRHEQAAVHAADAYARST GKVGVCLVTSGPGVTNAVTGIATAYMDSIPMVVISGQVPTAAIGQDAFQECDTVGITRPCVKHNFLVKDVRDLAATVKKA FYIARTGRPGPVLIDIPKDVSKAPCQYEPIKSVSLRSYNPVTKGHSGQIRKAVALLLSARRPYIYTGGGIILADASRELN QFADLLGYPVTNTLMGLGGYRASDKKFLGMLGMHGTYEANMAMQHCDVLIAIGARFDDRVIGDPSHFASRPRKIIHIDID PSSISKRVKVDIPIVGDVKEVLKELIEQLQTAEHGPDTAALADWWKDIEAWRAKDCLKFDRESDIIKPQYVVEKAWELTD GNAFVCSDVGQHQMWAAQFYRFNKPRRWINSGGLGTMGFGLPAAMGVKMAHPDDDVLCITGEGSIQMCIQELSTCKQYET PVKIISLNNRYLGMVRQWQQIEYSKRYSHSYMDALPDFVKLAEAYGHVGMRIEKTADVEPALKEALRLKDRTVFLDFQTD PTENVWPMVQAGKGITEMLLGSEDL
Sequences:
>Translated_585_residues MPSAEFSTSDTTPHHEADSIGATVLMKALADEEVEFVWGYPGGSVLYIYDELYKQDKFQHVLVRHEQAAVHAADAYARST GKVGVCLVTSGPGVTNAVTGIATAYMDSIPMVVISGQVPTAAIGQDAFQECDTVGITRPCVKHNFLVKDVRDLAATVKKA FYIARTGRPGPVLIDIPKDVSKAPCQYEPIKSVSLRSYNPVTKGHSGQIRKAVALLLSARRPYIYTGGGIILADASRELN QFADLLGYPVTNTLMGLGGYRASDKKFLGMLGMHGTYEANMAMQHCDVLIAIGARFDDRVIGDPSHFASRPRKIIHIDID PSSISKRVKVDIPIVGDVKEVLKELIEQLQTAEHGPDTAALADWWKDIEAWRAKDCLKFDRESDIIKPQYVVEKAWELTD GNAFVCSDVGQHQMWAAQFYRFNKPRRWINSGGLGTMGFGLPAAMGVKMAHPDDDVLCITGEGSIQMCIQELSTCKQYET PVKIISLNNRYLGMVRQWQQIEYSKRYSHSYMDALPDFVKLAEAYGHVGMRIEKTADVEPALKEALRLKDRTVFLDFQTD PTENVWPMVQAGKGITEMLLGSEDL >Mature_584_residues PSAEFSTSDTTPHHEADSIGATVLMKALADEEVEFVWGYPGGSVLYIYDELYKQDKFQHVLVRHEQAAVHAADAYARSTG KVGVCLVTSGPGVTNAVTGIATAYMDSIPMVVISGQVPTAAIGQDAFQECDTVGITRPCVKHNFLVKDVRDLAATVKKAF YIARTGRPGPVLIDIPKDVSKAPCQYEPIKSVSLRSYNPVTKGHSGQIRKAVALLLSARRPYIYTGGGIILADASRELNQ FADLLGYPVTNTLMGLGGYRASDKKFLGMLGMHGTYEANMAMQHCDVLIAIGARFDDRVIGDPSHFASRPRKIIHIDIDP SSISKRVKVDIPIVGDVKEVLKELIEQLQTAEHGPDTAALADWWKDIEAWRAKDCLKFDRESDIIKPQYVVEKAWELTDG NAFVCSDVGQHQMWAAQFYRFNKPRRWINSGGLGTMGFGLPAAMGVKMAHPDDDVLCITGEGSIQMCIQELSTCKQYETP VKIISLNNRYLGMVRQWQQIEYSKRYSHSYMDALPDFVKLAEAYGHVGMRIEKTADVEPALKEALRLKDRTVFLDFQTDP TENVWPMVQAGKGITEMLLGSEDL
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=583, Percent_Identity=24.6998284734134, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI21361361, Length=523, Percent_Identity=27.3422562141491, Blast_Score=154, Evalue=2e-37, Organism=Escherichia coli, GI87081685, Length=571, Percent_Identity=57.2679509632224, Blast_Score=674, Evalue=0.0, Organism=Escherichia coli, GI1790104, Length=560, Percent_Identity=41.25, Blast_Score=415, Evalue=1e-117, Organism=Escherichia coli, GI1786717, Length=534, Percent_Identity=34.0823970037453, Blast_Score=308, Evalue=5e-85, Organism=Escherichia coli, GI1787096, Length=566, Percent_Identity=27.9151943462898, Blast_Score=199, Evalue=6e-52, Organism=Escherichia coli, GI1788716, Length=554, Percent_Identity=23.826714801444, Blast_Score=142, Evalue=4e-35, Organism=Caenorhabditis elegans, GI17531299, Length=553, Percent_Identity=25.8589511754069, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17531301, Length=553, Percent_Identity=25.8589511754069, Blast_Score=155, Evalue=7e-38, Organism=Caenorhabditis elegans, GI17542570, Length=535, Percent_Identity=26.7289719626168, Blast_Score=140, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6323755, Length=581, Percent_Identity=43.2013769363167, Blast_Score=457, Evalue=1e-129, Organism=Saccharomyces cerevisiae, GI6320816, Length=475, Percent_Identity=24, Blast_Score=97, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6323163, Length=524, Percent_Identity=22.5190839694656, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI19922626, Length=565, Percent_Identity=25.8407079646018, Blast_Score=179, Evalue=5e-45,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 64688; Mature: 64557
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSAEFSTSDTTPHHEADSIGATVLMKALADEEVEFVWGYPGGSVLYIYDELYKQDKFQH CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEHHHHHHHHHHH VLVRHEQAAVHAADAYARSTGKVGVCLVTSGPGVTNAVTGIATAYMDSIPMVVISGQVPT HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC AAIGQDAFQECDTVGITRPCVKHNFLVKDVRDLAATVKKAFYIARTGRPGPVLIDIPKDV HHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCCCC SKAPCQYEPIKSVSLRSYNPVTKGHSGQIRKAVALLLSARRPYIYTGGGIILADASRELN CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEECCHHHHH QFADLLGYPVTNTLMGLGGYRASDKKFLGMLGMHGTYEANMAMQHCDVLIAIGARFDDRV HHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCEEEEECCCCCCCC IGDPSHFASRPRKIIHIDIDPSSISKRVKVDIPIVGDVKEVLKELIEQLQTAEHGPDTAA CCCCHHHHCCCCEEEEEEECHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHH LADWWKDIEAWRAKDCLKFDRESDIIKPQYVVEKAWELTDGNAFVCSDVGQHQMWAAQFY HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHH RFNKPRRWINSGGLGTMGFGLPAAMGVKMAHPDDDVLCITGEGSIQMCIQELSTCKQYET HCCCCHHHHCCCCCCCCCCCCHHHHCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHCC PVKIISLNNRYLGMVRQWQQIEYSKRYSHSYMDALPDFVKLAEAYGHVGMRIEKTADVEP CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCH ALKEALRLKDRTVFLDFQTDPTENVWPMVQAGKGITEMLLGSEDL HHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHCCCCCC >Mature Secondary Structure PSAEFSTSDTTPHHEADSIGATVLMKALADEEVEFVWGYPGGSVLYIYDELYKQDKFQH CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEHHHHHHHHHHH VLVRHEQAAVHAADAYARSTGKVGVCLVTSGPGVTNAVTGIATAYMDSIPMVVISGQVPT HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC AAIGQDAFQECDTVGITRPCVKHNFLVKDVRDLAATVKKAFYIARTGRPGPVLIDIPKDV HHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCCCC SKAPCQYEPIKSVSLRSYNPVTKGHSGQIRKAVALLLSARRPYIYTGGGIILADASRELN CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEECCHHHHH QFADLLGYPVTNTLMGLGGYRASDKKFLGMLGMHGTYEANMAMQHCDVLIAIGARFDDRV HHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCEEEEECCCCCCCC IGDPSHFASRPRKIIHIDIDPSSISKRVKVDIPIVGDVKEVLKELIEQLQTAEHGPDTAA CCCCHHHHCCCCEEEEEEECHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHH LADWWKDIEAWRAKDCLKFDRESDIIKPQYVVEKAWELTDGNAFVCSDVGQHQMWAAQFY HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHH RFNKPRRWINSGGLGTMGFGLPAAMGVKMAHPDDDVLCITGEGSIQMCIQELSTCKQYET HCCCCHHHHCCCCCCCCCCCCHHHHCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHCC PVKIISLNNRYLGMVRQWQQIEYSKRYSHSYMDALPDFVKLAEAYGHVGMRIEKTADVEP CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCH ALKEALRLKDRTVFLDFQTDPTENVWPMVQAGKGITEMLLGSEDL HHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]