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The map label for this gene is 186476715

Identifier: 186476715

GI number: 186476715

Start: 2204144

End: 2205397

Strand: Reverse

Name: 186476715

Synonym: Bphy_1960

Alternate gene names: NA

Gene position: 2205397-2204144 (Counterclockwise)

Preceding gene: 186476716

Following gene: 186476713

Centisome position: 63.39

GC content: 62.6

Gene sequence:

>1254_bases
ATGATGGCGCAACGCGACTCACAACGTAGCGTGAAGCGGGCGCGTGCCGGCGACGCCGGTGCGGGAGCAAGCGAGCAGGC
CGGCGCGGCGTCCGGCGTCCGCGCCAGTCATCACGAGGCGCTGCCTCAGTACGAGACCATCGCGCTGATGCTGCAGGGAG
GCGGCGCGCTGGGCGCGTATCAGGCGGGCGTTTATCAGGGGCTGGACGAGGCGGGCATCCTGCCCAACTGGCTGGCTGGC
ATTTCCATTGGCGCGCTGAACACGGCGATCATTGCGGGCAACGCGCCGCAACATCGCGTCCAGAAGCTGCGTGAGTTTTG
GGAAACCATTTGCCAGCCGGCCTTCGGTCCGCCCATGCCGCCTTCCGTCGAACAGGCGCTGTTCAACTCGAATGACACGG
TGCGCAAGGCGTTTACTGCAATGCAGGCGGTGGGCGCACTCGTCGACGGGCAGAAGGGTTTCTTCACGCCGCGCTTTCCG
CCGCCGCTGCCCGCTGTTTCTGTCCCTCCGCAACTCGCGAGCTATTACGACACCACGCCGCTCAAGGCGACGCTCGAACG
GCTCTGCGACTTCGAGCGGATCAATTCGAAGAACATGCATGTGTCGGTGGGCGCCGTGAATGTGCACACGGGCAACTTCG
CCTATTTCGACAACATGCACACCACCTTGAAGCCAGAGCATTTCATGGCATCGGGCGCGTTGCCGCCGGGATTCGGCGCT
GTCGAGATCGACGGCGAGTATTACTGGGACGGCGGCCTGATGTCGAATACGCCGCTCTACGAGGTTGCGCAAGCCAGTCC
GCGGCGCGATACGCTTGCGTTTCAGGTCGATCTGTGGAGCGCGTTGGGTCCCGTGCCGGACAACATCACCGACGTCCAGG
GGCGGATGAAGGACATTCAGTATTCCAGCCGCACGCGCCTCGTCACGGACATGATGCAGCGCACGCAGCGCTTCCGGCAT
GTGCTGCGCGAAGTGCTCGAACGCGTGTCGCCTGAGCATCGCGACGATCCCTGGTCCAAGCTCGCCGAAGAACTGTCGTG
TTCGAAACGCTACAACATCGTGCACCTGATCTACCGCAACAAGGAATACGAAGGGCACTACAAAGACTATCAGTTCGGTT
TGTCGACGATGCAGCAGCATTGGGAAAGTGGCCTGGACGACATCCGCAACTCGCTCGCGCAACCCGGCTGGCTCGATATG
CCGGACAACGATGCAGGGTTCGTCACGCACGATATTCACCGCGACTCGCGTTGA

Upstream 100 bases:

>100_bases
CTCTTCCTGTCGTCGTTCCCGACTGCGGCGCTCACGGGCCAGTCGTTCATCGTCAGCCACGGCTGGTACATGCAATAACC
GATGTAATCATCAGGAGGTG

Downstream 100 bases:

>100_bases
TGTTGCTGGGCCGATGGTTGTCTGCGCAGCACGAAAAAAGGCGCTCATAAGGAGCGCCTTCTTCGTTCCAGCAGAGACAG
CGACTCACGCCGTCATGCAG

Product: patatin

Products: NA

Alternate protein names: Patatin-Like Phospholipase; Esterase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Transmembrane Protein; Phospholipase Patatin Family; Transmembrane Patatin-Like Phospholipase; Patatin-Like Phospholipase Domain-Containing Protein; Alpha/Beta Hydrolase; Patatin-Like Phospholipase Family; Serine Protease; Alpha-Beta Hydrolase Family Esterase; Patatin Family Phospholipase; Dehydrogenase/Reductase; Phospholipase Patatin Family Protein; Transpatatin- Like Phospholipase Domain-Containing Protein

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MMAQRDSQRSVKRARAGDAGAGASEQAGAASGVRASHHEALPQYETIALMLQGGGALGAYQAGVYQGLDEAGILPNWLAG
ISIGALNTAIIAGNAPQHRVQKLREFWETICQPAFGPPMPPSVEQALFNSNDTVRKAFTAMQAVGALVDGQKGFFTPRFP
PPLPAVSVPPQLASYYDTTPLKATLERLCDFERINSKNMHVSVGAVNVHTGNFAYFDNMHTTLKPEHFMASGALPPGFGA
VEIDGEYYWDGGLMSNTPLYEVAQASPRRDTLAFQVDLWSALGPVPDNITDVQGRMKDIQYSSRTRLVTDMMQRTQRFRH
VLREVLERVSPEHRDDPWSKLAEELSCSKRYNIVHLIYRNKEYEGHYKDYQFGLSTMQQHWESGLDDIRNSLAQPGWLDM
PDNDAGFVTHDIHRDSR

Sequences:

>Translated_417_residues
MMAQRDSQRSVKRARAGDAGAGASEQAGAASGVRASHHEALPQYETIALMLQGGGALGAYQAGVYQGLDEAGILPNWLAG
ISIGALNTAIIAGNAPQHRVQKLREFWETICQPAFGPPMPPSVEQALFNSNDTVRKAFTAMQAVGALVDGQKGFFTPRFP
PPLPAVSVPPQLASYYDTTPLKATLERLCDFERINSKNMHVSVGAVNVHTGNFAYFDNMHTTLKPEHFMASGALPPGFGA
VEIDGEYYWDGGLMSNTPLYEVAQASPRRDTLAFQVDLWSALGPVPDNITDVQGRMKDIQYSSRTRLVTDMMQRTQRFRH
VLREVLERVSPEHRDDPWSKLAEELSCSKRYNIVHLIYRNKEYEGHYKDYQFGLSTMQQHWESGLDDIRNSLAQPGWLDM
PDNDAGFVTHDIHRDSR
>Mature_417_residues
MMAQRDSQRSVKRARAGDAGAGASEQAGAASGVRASHHEALPQYETIALMLQGGGALGAYQAGVYQGLDEAGILPNWLAG
ISIGALNTAIIAGNAPQHRVQKLREFWETICQPAFGPPMPPSVEQALFNSNDTVRKAFTAMQAVGALVDGQKGFFTPRFP
PPLPAVSVPPQLASYYDTTPLKATLERLCDFERINSKNMHVSVGAVNVHTGNFAYFDNMHTTLKPEHFMASGALPPGFGA
VEIDGEYYWDGGLMSNTPLYEVAQASPRRDTLAFQVDLWSALGPVPDNITDVQGRMKDIQYSSRTRLVTDMMQRTQRFRH
VLREVLERVSPEHRDDPWSKLAEELSCSKRYNIVHLIYRNKEYEGHYKDYQFGLSTMQQHWESGLDDIRNSLAQPGWLDM
PDNDAGFVTHDIHRDSR

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46294; Mature: 46294

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAQRDSQRSVKRARAGDAGAGASEQAGAASGVRASHHEALPQYETIALMLQGGGALGAY
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCHHH
QAGVYQGLDEAGILPNWLAGISIGALNTAIIAGNAPQHRVQKLREFWETICQPAFGPPMP
HHHHHHCCHHCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC
PSVEQALFNSNDTVRKAFTAMQAVGALVDGQKGFFTPRFPPPLPAVSVPPQLASYYDTTP
CHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
LKATLERLCDFERINSKNMHVSVGAVNVHTGNFAYFDNMHTTLKPEHFMASGALPPGFGA
HHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCEEEECCCCCCCCCHHHHHCCCCCCCCCE
VEIDGEYYWDGGLMSNTPLYEVAQASPRRDTLAFQVDLWSALGPVPDNITDVQGRMKDIQ
EEECCEEEECCCCCCCCCHHHHHCCCCCCCEEEEEEEHHHHCCCCCCCHHHHHHHHHHHH
YSSRTRLVTDMMQRTQRFRHVLREVLERVSPEHRDDPWSKLAEELSCSKRYNIVHLIYRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEC
KEYEGHYKDYQFGLSTMQQHWESGLDDIRNSLAQPGWLDMPDNDAGFVTHDIHRDSR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCC
>Mature Secondary Structure
MMAQRDSQRSVKRARAGDAGAGASEQAGAASGVRASHHEALPQYETIALMLQGGGALGAY
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCCHHH
QAGVYQGLDEAGILPNWLAGISIGALNTAIIAGNAPQHRVQKLREFWETICQPAFGPPMP
HHHHHHCCHHCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC
PSVEQALFNSNDTVRKAFTAMQAVGALVDGQKGFFTPRFPPPLPAVSVPPQLASYYDTTP
CHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
LKATLERLCDFERINSKNMHVSVGAVNVHTGNFAYFDNMHTTLKPEHFMASGALPPGFGA
HHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCEEEECCCCCCCCCHHHHHCCCCCCCCCE
VEIDGEYYWDGGLMSNTPLYEVAQASPRRDTLAFQVDLWSALGPVPDNITDVQGRMKDIQ
EEECCEEEECCCCCCCCCHHHHHCCCCCCCEEEEEEEHHHHCCCCCCCHHHHHHHHHHHH
YSSRTRLVTDMMQRTQRFRHVLREVLERVSPEHRDDPWSKLAEELSCSKRYNIVHLIYRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEC
KEYEGHYKDYQFGLSTMQQHWESGLDDIRNSLAQPGWLDMPDNDAGFVTHDIHRDSR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA