| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476661
Identifier: 186476661
GI number: 186476661
Start: 2155899
End: 2156918
Strand: Reverse
Name: 186476661
Synonym: Bphy_1906
Alternate gene names: NA
Gene position: 2156918-2155899 (Counterclockwise)
Preceding gene: 186476662
Following gene: 186476660
Centisome position: 61.99
GC content: 61.86
Gene sequence:
>1020_bases ATGAGCGTGAAGGTCATGGGCATGGTCTTCGACCGTTATCCGGCCGGCGGCGGCGAGATGATCCTCGCGCTGAAGCTGGC GGATCACGCGCACGACGACGGCACCCACATTTTCCCTGGCATCGCGAGCCTCGCGGAGAAGACGCGCCAGTCCGAGCGCG CCGTGCAGTACCAGCTGCGCAGCATGGAGAAGTCCGGCTGGCTGATCCTCGTCGGCCAGGGCAAGGGCGGTCGTGGCAAG TCGCGCGAGTACCGCATCAATCCCGACTGGATAAACGGTGCAGATATTGCACTCATTGTTGACAACTCAAAGGGTGAAGA AATTGCACCCATTGATGAAGATGCAAAGGGTGCAAACGTCGACACGAAAGGGTGCAATCCGGAACAAGAAAGGGTGCAAA ACGAAGCACAAAAGGGTGCAACAGCTATTGCACCCGAATCGTCAGTAACCGTCAAAGAACCATCAGGTAACCGTCAACCC GCGCGACGGACGTCGCGAATTGCGTTGCATGTCCAGCTGCGAGCAACCGAACTGCCCGACTGGTTGCCTCAAGCCTCGTG GGACGACTGGTGCGAACACCGGGAGACCAAGCACGCCGACGGTGATGCGCCGTGGACCAGAGTCGCTGCAAAGGTATCGA TCCAGAAGCTGGCGATGCTGCGCGAGCAGGGGCACGACCCGGTCATCTGCATCAACGAGGCAGCGCTGCGCGGCTGGACG GGCCTGTTCCCGGTCAAGGGCGAATCGCAGCAGTCGAGCGGCGCGCAGGCAATCCCCGCTGACTGGCACAAGACGACCGC TGGCGTCACCGAGCAAGGCAGGCGGCTCGGCGTCACGCAGAAGGAAGGCGAAGTCTTCATGCGCTTCAAGGCACGCGTTG TGAAGGCGGCGGGCCCGGGTGAATGGATGGAAGACATGCTGCGCGACGCTGCGCGCTTTGGCGACGACCACTACGACGGC CTGTATCGCTACTTCAACGACATTCCGCGCGACAAGGTCGCGCTCGCGGAGGCCGCATGA
Upstream 100 bases:
>100_bases AACTGCTCGACGCCAAGCGCCTTTTCGTGGTCGGCAGTCGCAAGGATCTGGCGACGCAGACGAGTCATCAACTGCTGTCG ACGAAGCCGGTGGTGTCTGC
Downstream 100 bases:
>100_bases GCACGATCCTCGTCGAACCGAATCCGTTTTTCCTCGTCTGGTCGCCGACTGGCGAAACGCCGCCGAGCTTCAAGCATCAG TCGCGGCAGAGCGCAGTGAA
Product: GP60
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSVKVMGMVFDRYPAGGGEMILALKLADHAHDDGTHIFPGIASLAEKTRQSERAVQYQLRSMEKSGWLILVGQGKGGRGK SREYRINPDWINGADIALIVDNSKGEEIAPIDEDAKGANVDTKGCNPEQERVQNEAQKGATAIAPESSVTVKEPSGNRQP ARRTSRIALHVQLRATELPDWLPQASWDDWCEHRETKHADGDAPWTRVAAKVSIQKLAMLREQGHDPVICINEAALRGWT GLFPVKGESQQSSGAQAIPADWHKTTAGVTEQGRRLGVTQKEGEVFMRFKARVVKAAGPGEWMEDMLRDAARFGDDHYDG LYRYFNDIPRDKVALAEAA
Sequences:
>Translated_339_residues MSVKVMGMVFDRYPAGGGEMILALKLADHAHDDGTHIFPGIASLAEKTRQSERAVQYQLRSMEKSGWLILVGQGKGGRGK SREYRINPDWINGADIALIVDNSKGEEIAPIDEDAKGANVDTKGCNPEQERVQNEAQKGATAIAPESSVTVKEPSGNRQP ARRTSRIALHVQLRATELPDWLPQASWDDWCEHRETKHADGDAPWTRVAAKVSIQKLAMLREQGHDPVICINEAALRGWT GLFPVKGESQQSSGAQAIPADWHKTTAGVTEQGRRLGVTQKEGEVFMRFKARVVKAAGPGEWMEDMLRDAARFGDDHYDG LYRYFNDIPRDKVALAEAA >Mature_338_residues SVKVMGMVFDRYPAGGGEMILALKLADHAHDDGTHIFPGIASLAEKTRQSERAVQYQLRSMEKSGWLILVGQGKGGRGKS REYRINPDWINGADIALIVDNSKGEEIAPIDEDAKGANVDTKGCNPEQERVQNEAQKGATAIAPESSVTVKEPSGNRQPA RRTSRIALHVQLRATELPDWLPQASWDDWCEHRETKHADGDAPWTRVAAKVSIQKLAMLREQGHDPVICINEAALRGWTG LFPVKGESQQSSGAQAIPADWHKTTAGVTEQGRRLGVTQKEGEVFMRFKARVVKAAGPGEWMEDMLRDAARFGDDHYDGL YRYFNDIPRDKVALAEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37391; Mature: 37260
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKVMGMVFDRYPAGGGEMILALKLADHAHDDGTHIFPGIASLAEKTRQSERAVQYQLR CCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH SMEKSGWLILVGQGKGGRGKSREYRINPDWINGADIALIVDNSKGEEIAPIDEDAKGANV HHCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCC DTKGCNPEQERVQNEAQKGATAIAPESSVTVKEPSGNRQPARRTSRIALHVQLRATELPD CCCCCCCHHHHHHHHHHCCCEEECCCCCEEEECCCCCCCCHHHCCEEEEEEEEEECCCCC WLPQASWDDWCEHRETKHADGDAPWTRVAAKVSIQKLAMLREQGHDPVICINEAALRGWT CCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCC GLFPVKGESQQSSGAQAIPADWHKTTAGVTEQGRRLGVTQKEGEVFMRFKARVVKAAGPG CCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCHHHEEEHHHHEECCCCH EWMEDMLRDAARFGDDHYDGLYRYFNDIPRDKVALAEAA HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure SVKVMGMVFDRYPAGGGEMILALKLADHAHDDGTHIFPGIASLAEKTRQSERAVQYQLR CEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH SMEKSGWLILVGQGKGGRGKSREYRINPDWINGADIALIVDNSKGEEIAPIDEDAKGANV HHCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCC DTKGCNPEQERVQNEAQKGATAIAPESSVTVKEPSGNRQPARRTSRIALHVQLRATELPD CCCCCCCHHHHHHHHHHCCCEEECCCCCEEEECCCCCCCCHHHCCEEEEEEEEEECCCCC WLPQASWDDWCEHRETKHADGDAPWTRVAAKVSIQKLAMLREQGHDPVICINEAALRGWT CCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCC GLFPVKGESQQSSGAQAIPADWHKTTAGVTEQGRRLGVTQKEGEVFMRFKARVVKAAGPG CCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCHHHEEEHHHHEECCCCH EWMEDMLRDAARFGDDHYDGLYRYFNDIPRDKVALAEAA HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA