| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is pphA [H]
Identifier: 186476654
GI number: 186476654
Start: 2152898
End: 2153632
Strand: Reverse
Name: pphA [H]
Synonym: Bphy_1899
Alternate gene names: 186476654
Gene position: 2153632-2152898 (Counterclockwise)
Preceding gene: 186476655
Following gene: 186476653
Centisome position: 61.9
GC content: 63.4
Gene sequence:
>735_bases TTGATCACGAAATACGTGCGGCGCTTTGCGCGCAACACCGTCGGCATCGACTATGCCGTCGGCGACATCCACGGCTGCTT CGCCGCGCTCGAGATCGAGCTCGCGAAGATCCGTTTCGATGAGAGGGTCGACCGTCTCTTTTCCGTCGGCGATTTGGTCG ACCGTGGCCCGCAGTCGGATACCGCCGTCGAGTGGATCAGCAAACCGTGGTTCCACGCCGTTCAGGGCAATCACGAAGAC ATGGCTATCCGCTACGTCGAGCCCGGCAATCGGGACCGTGACCATTACATGATGACCGGCGGCGCATGGCTGATCGAGAA GCCGCGCTATGCGCAGGTCATGATCGCCGACGCTCTCGCCGAACTGCCGTACGCGATCGAGGTGGAGACGGATGGCGGCC TCGTCGGGATCGTGCACGCCGACGTCCACGGCAAAAGCTGGTCTGACATGGTCCAGGCGTTCGCCTGCGCCGACAGCGGC ACGAAGCTGCGACGTATCACGAACAGCGTGCTGTGGAACCGCGACCGCATTCAGGACGAAGACCACTCAGGTGTGCCCGA CATGCGCGCCGTGGTGGTCGGCCACACGCCCCTGAAGCGCCCGGCGGCGTTGGGCAACGTCTATCACATCGACACGGGTG GATGGCTGCGCGGCGGCAGCTTTACATTTCTGCGCCTTGATGACCTCCAGCCCTCGACGCCTGCGTCTCACGAACTGAAT TGGGAGGGCGCTTGA
Upstream 100 bases:
>100_bases GCGCGTCGCGCGAGGCGAAATTCGCGCGCTGGGATCTCGCATACGAGCGGTGGGCGCCCGTAAGGGCGAGAAAGATGGGA ATTCAACTGCAGGAGGCTGC
Downstream 100 bases:
>100_bases GGCTTGTCGTACGTATGCCGCTGCCGTCGTACCGAAAGGGTCGTCGATGGATGGAAAACTATCACTCGTTCGAATGCCTC GTCGTTCGCGTGCGCGGGCC
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MITKYVRRFARNTVGIDYAVGDIHGCFAALEIELAKIRFDERVDRLFSVGDLVDRGPQSDTAVEWISKPWFHAVQGNHED MAIRYVEPGNRDRDHYMMTGGAWLIEKPRYAQVMIADALAELPYAIEVETDGGLVGIVHADVHGKSWSDMVQAFACADSG TKLRRITNSVLWNRDRIQDEDHSGVPDMRAVVVGHTPLKRPAALGNVYHIDTGGWLRGGSFTFLRLDDLQPSTPASHELN WEGA
Sequences:
>Translated_244_residues MITKYVRRFARNTVGIDYAVGDIHGCFAALEIELAKIRFDERVDRLFSVGDLVDRGPQSDTAVEWISKPWFHAVQGNHED MAIRYVEPGNRDRDHYMMTGGAWLIEKPRYAQVMIADALAELPYAIEVETDGGLVGIVHADVHGKSWSDMVQAFACADSG TKLRRITNSVLWNRDRIQDEDHSGVPDMRAVVVGHTPLKRPAALGNVYHIDTGGWLRGGSFTFLRLDDLQPSTPASHELN WEGA >Mature_244_residues MITKYVRRFARNTVGIDYAVGDIHGCFAALEIELAKIRFDERVDRLFSVGDLVDRGPQSDTAVEWISKPWFHAVQGNHED MAIRYVEPGNRDRDHYMMTGGAWLIEKPRYAQVMIADALAELPYAIEVETDGGLVGIVHADVHGKSWSDMVQAFACADSG TKLRRITNSVLWNRDRIQDEDHSGVPDMRAVVVGHTPLKRPAALGNVYHIDTGGWLRGGSFTFLRLDDLQPSTPASHELN WEGA
Specific function: Can hydrolyze phosphorylated Ser-, Thr- or Tyr- substrates in vitro. The natural substrate is unknown [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PPP phosphatase family. PP-1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081988, Length=213, Percent_Identity=33.8028169014084, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1789090, Length=215, Percent_Identity=30.6976744186047, Blast_Score=99, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR006186 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.1.3.16 [H]
Molecular weight: Translated: 27301; Mature: 27301
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITKYVRRFARNTVGIDYAVGDIHGCFAALEIELAKIRFDERVDRLFSVGDLVDRGPQSD CHHHHHHHHHHCCCCEEEEHHHHHHHHHHHEEEHEEHHHHHHHHHHHHHHHHHHCCCCCC TAVEWISKPWFHAVQGNHEDMAIRYVEPGNRDRDHYMMTGGAWLIEKPRYAQVMIADALA HHHHHHHCCCHHHHCCCCCCEEEEEECCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHH ELPYAIEVETDGGLVGIVHADVHGKSWSDMVQAFACADSGTKLRRITNSVLWNRDRIQDE HCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHCCCC DHSGVPDMRAVVVGHTPLKRPAALGNVYHIDTGGWLRGGSFTFLRLDDLQPSTPASHELN CCCCCCCCEEEEECCCCCCCCHHCCCEEEECCCCEEECCCEEEEEECCCCCCCCCCCCCC WEGA CCCC >Mature Secondary Structure MITKYVRRFARNTVGIDYAVGDIHGCFAALEIELAKIRFDERVDRLFSVGDLVDRGPQSD CHHHHHHHHHHCCCCEEEEHHHHHHHHHHHEEEHEEHHHHHHHHHHHHHHHHHHCCCCCC TAVEWISKPWFHAVQGNHEDMAIRYVEPGNRDRDHYMMTGGAWLIEKPRYAQVMIADALA HHHHHHHCCCHHHHCCCCCCEEEEEECCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHH ELPYAIEVETDGGLVGIVHADVHGKSWSDMVQAFACADSGTKLRRITNSVLWNRDRIQDE HCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHCCCC DHSGVPDMRAVVVGHTPLKRPAALGNVYHIDTGGWLRGGSFTFLRLDDLQPSTPASHELN CCCCCCCCEEEEECCCCCCCCHHCCCEEEECCCCEEECCCEEEEEECCCCCCCCCCCCCC WEGA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11717262; 11677609 [H]