| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is 186476647
Identifier: 186476647
GI number: 186476647
Start: 2149563
End: 2149841
Strand: Reverse
Name: 186476647
Synonym: Bphy_1892
Alternate gene names: NA
Gene position: 2149841-2149563 (Counterclockwise)
Preceding gene: 186476648
Following gene: 186476646
Centisome position: 61.79
GC content: 63.8
Gene sequence:
>279_bases ATGGCACGTCCACCCAAGAAAATCGATGCGGAAGCCTTTGTGGGCGAGATCGCATTGATGCGTTCGTCGATCTGGCAGAA CGGCAAGAAGGCGGTGGCAGCGATCATCACCGAAGCGACGACGGATGCGGCGCTGCTGCCCGATAAGGCTATCGCGCTCG TGTCGGTCACGGCATTCGCGCCCGGCGCTCCCTCGCGGCTCGTCCGCGACGTTCCGCTCTATCGCGGGGACGCCGGCGCA GACGTTTTACCGTCAGCCTGGCTCAAAACCTCGGCCTGA
Upstream 100 bases:
>100_bases CCGAGCGCGGTAACTCTCTTCGAATGTCTCCTCCTGCGCCGAGAGTCGTGGGATTCGCCAGCGCGCCTTCGTCGCTGGCT TTTTTATTTCCGGTGACTGA
Downstream 100 bases:
>100_bases CATGCTGAAGCTAAATGTTCACGCTGACGTTAAGGGCGTCGCGACAAGCCTGACCCGATACGTTGGCGAGCACCAGAAAG CGGTTGTCCGCGCGCTCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MARPPKKIDAEAFVGEIALMRSSIWQNGKKAVAAIITEATTDAALLPDKAIALVSVTAFAPGAPSRLVRDVPLYRGDAGA DVLPSAWLKTSA
Sequences:
>Translated_92_residues MARPPKKIDAEAFVGEIALMRSSIWQNGKKAVAAIITEATTDAALLPDKAIALVSVTAFAPGAPSRLVRDVPLYRGDAGA DVLPSAWLKTSA >Mature_91_residues ARPPKKIDAEAFVGEIALMRSSIWQNGKKAVAAIITEATTDAALLPDKAIALVSVTAFAPGAPSRLVRDVPLYRGDAGAD VLPSAWLKTSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9602; Mature: 9471
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPPKKIDAEAFVGEIALMRSSIWQNGKKAVAAIITEATTDAALLPDKAIALVSVTAFA CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHEEEHCCCC PGAPSRLVRDVPLYRGDAGADVLPSAWLKTSA CCCHHHHHHHCCCCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure ARPPKKIDAEAFVGEIALMRSSIWQNGKKAVAAIITEATTDAALLPDKAIALVSVTAFA CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHEEEHCCCC PGAPSRLVRDVPLYRGDAGADVLPSAWLKTSA CCCHHHHHHHCCCCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA