| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476646
Identifier: 186476646
GI number: 186476646
Start: 2148983
End: 2149561
Strand: Reverse
Name: 186476646
Synonym: Bphy_1891
Alternate gene names: NA
Gene position: 2149561-2148983 (Counterclockwise)
Preceding gene: 186476647
Following gene: 186476645
Centisome position: 61.78
GC content: 60.62
Gene sequence:
>579_bases ATGCTGAAGCTAAATGTTCACGCTGACGTTAAGGGCGTCGCGACAAGCCTGACCCGATACGTTGGCGAGCACCAGAAAGC GGTTGTCCGCGCGCTCAACAAGACGGCGATGCAGGCCCGAACGGCCGCCGCGCTGGAAGTGCGAAGCGCTGGCTACAACA TCAAGTCGAGCGCGATCAAGAGTTCGTTCGCGGTGCAGAGAGCATCCCGCGGCAAGCTCGTCGCGGTGCTCAAGTCAACG GGTCGCCCGGTGGCGCTGATCAACTATGGCGCGCGCCAAGGCAAGAACGGCGTGAGCGTGCAGGTGAAAGCTGGTCGAAC CGTTCTGCGTCACGCGTTCATCGCGACGATGCGGAACGGTCACAAAGGCGTTTTCGAGCGGACGGGCAAGACGCACAAGA AGGTCATGCGCAACGGCAAGGTTGTTCGATCCGGATTGCCGATCAAAGAACTGTTCGGCCCGTCGATTCCGCAGTCGCTC GCGAACGATGCGGTGCAGAAGGCGCTGATGAAGAAGATCCGCGAGAAGTTCCCGCAGATCCTGAAGCACGAACTCGCGTT CATCGCGTCGAAGCGCTGA
Upstream 100 bases:
>100_bases CCCGGCGCTCCCTCGCGGCTCGTCCGCGACGTTCCGCTCTATCGCGGGGACGCCGGCGCAGACGTTTTACCGTCAGCCTG GCTCAAAACCTCGGCCTGAC
Downstream 100 bases:
>100_bases CGCGCGCGGACTGGCGCTGCACGTCGCGATGCACTGCTCTGGTGAAAAGCATGCTTTTTTGACCGGCCGGGTCCTTCCCG GGCAATCGCAGCAGGGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MLKLNVHADVKGVATSLTRYVGEHQKAVVRALNKTAMQARTAAALEVRSAGYNIKSSAIKSSFAVQRASRGKLVAVLKST GRPVALINYGARQGKNGVSVQVKAGRTVLRHAFIATMRNGHKGVFERTGKTHKKVMRNGKVVRSGLPIKELFGPSIPQSL ANDAVQKALMKKIREKFPQILKHELAFIASKR
Sequences:
>Translated_192_residues MLKLNVHADVKGVATSLTRYVGEHQKAVVRALNKTAMQARTAAALEVRSAGYNIKSSAIKSSFAVQRASRGKLVAVLKST GRPVALINYGARQGKNGVSVQVKAGRTVLRHAFIATMRNGHKGVFERTGKTHKKVMRNGKVVRSGLPIKELFGPSIPQSL ANDAVQKALMKKIREKFPQILKHELAFIASKR >Mature_192_residues MLKLNVHADVKGVATSLTRYVGEHQKAVVRALNKTAMQARTAAALEVRSAGYNIKSSAIKSSFAVQRASRGKLVAVLKST GRPVALINYGARQGKNGVSVQVKAGRTVLRHAFIATMRNGHKGVFERTGKTHKKVMRNGKVVRSGLPIKELFGPSIPQSL ANDAVQKALMKKIREKFPQILKHELAFIASKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20919; Mature: 20919
Theoretical pI: Translated: 12.15; Mature: 12.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLNVHADVKGVATSLTRYVGEHQKAVVRALNKTAMQARTAAALEVRSAGYNIKSSAIK CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH SSFAVQRASRGKLVAVLKSTGRPVALINYGARQGKNGVSVQVKAGRTVLRHAFIATMRNG HHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHCC HKGVFERTGKTHKKVMRNGKVVRSGLPIKELFGPSIPQSLANDAVQKALMKKIREKFPQI CCHHHHHCCHHHHHHHHCCCEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LKHELAFIASKR HHHHHHHHHCCC >Mature Secondary Structure MLKLNVHADVKGVATSLTRYVGEHQKAVVRALNKTAMQARTAAALEVRSAGYNIKSSAIK CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH SSFAVQRASRGKLVAVLKSTGRPVALINYGARQGKNGVSVQVKAGRTVLRHAFIATMRNG HHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHCC HKGVFERTGKTHKKVMRNGKVVRSGLPIKELFGPSIPQSLANDAVQKALMKKIREKFPQI CCHHHHHCCHHHHHHHHCCCEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LKHELAFIASKR HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA