| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476638
Identifier: 186476638
GI number: 186476638
Start: 2141150
End: 2141797
Strand: Reverse
Name: 186476638
Synonym: Bphy_1883
Alternate gene names: NA
Gene position: 2141797-2141150 (Counterclockwise)
Preceding gene: 186476639
Following gene: 186476637
Centisome position: 61.56
GC content: 66.2
Gene sequence:
>648_bases ATGAGCTACGTTTCTCGCTCGCCCCTGATCGAGCAATGGCACGCGGGCGGCTTTCTGGTCTCGCAGCCGCGTGGTCACCG TCATATCGATCGTGGCACCTTCACGGGCGCCGTCAAGGTCTATCCCGGCACGGTGATGGGCCAGCAGACCGTCGGCACGA CGGCGGCCGCCGCAGCGCTCGGCACGAACACGGGCAACGGTACGTTCGGCGCGATCACGGTCGGCGCGGCAAAGGCCGGT GCCTATACGGTCGAGTTCGACGATGCGACGCATTACGTCGTTTCCGATCCGACCGGCAAGGAAGTCGGACACGGCACGAC GGGCGTTGCATTCAATGCTGGCGGCCTCGGCTTCACGATCACGGCAGGCGGTACGGCCTTCGTCGCCGGCGACAGCTTCA CGGTCACCGTCGCTGCTGGCTCGGGCAAGTGGGTGCCCTGCGTTAAGACGGCGACGGACGGTTCGCAGATCGCTGCGGGC ATCTCGTTCGGTCTCGTCGATGCAACGCTGAACGACACGCCGGGTGCAATCGTCGTGCGCGACTGCGAAGTGAACACGTC GGAACTCGTGTGGGATGCGTCGATGGATGCGCCCGCGCAGGCCGCCGCGCTCGCTGCGCTGCTCGCGCTGAAGATCATCG CTCGCTGA
Upstream 100 bases:
>100_bases CCGCAACGCGAAGCATCGGCAGGCTGGGACCGCGCCTTCACGAAGGCGACGGGCAAGCGCGCGTAAGCGTACCTCTCACA TCTTCATCTAAGGAACTCTC
Downstream 100 bases:
>100_bases TCCCCACAACTCGAAAAAGACAGGCCGCCTTCGGGCGGCTTTTTCATTTGAAGGAGCCGTTCAATGGCATCGCTTGATAT TTTCAACCAGGACCCGTTCT
Product: putative phage protein GP19
Products: NA
Alternate protein names: Phage Protein Gp
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MSYVSRSPLIEQWHAGGFLVSQPRGHRHIDRGTFTGAVKVYPGTVMGQQTVGTTAAAAALGTNTGNGTFGAITVGAAKAG AYTVEFDDATHYVVSDPTGKEVGHGTTGVAFNAGGLGFTITAGGTAFVAGDSFTVTVAAGSGKWVPCVKTATDGSQIAAG ISFGLVDATLNDTPGAIVVRDCEVNTSELVWDASMDAPAQAAALAALLALKIIAR
Sequences:
>Translated_215_residues MSYVSRSPLIEQWHAGGFLVSQPRGHRHIDRGTFTGAVKVYPGTVMGQQTVGTTAAAAALGTNTGNGTFGAITVGAAKAG AYTVEFDDATHYVVSDPTGKEVGHGTTGVAFNAGGLGFTITAGGTAFVAGDSFTVTVAAGSGKWVPCVKTATDGSQIAAG ISFGLVDATLNDTPGAIVVRDCEVNTSELVWDASMDAPAQAAALAALLALKIIAR >Mature_214_residues SYVSRSPLIEQWHAGGFLVSQPRGHRHIDRGTFTGAVKVYPGTVMGQQTVGTTAAAAALGTNTGNGTFGAITVGAAKAGA YTVEFDDATHYVVSDPTGKEVGHGTTGVAFNAGGLGFTITAGGTAFVAGDSFTVTVAAGSGKWVPCVKTATDGSQIAAGI SFGLVDATLNDTPGAIVVRDCEVNTSELVWDASMDAPAQAAALAALLALKIIAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21605; Mature: 21474
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVSRSPLIEQWHAGGFLVSQPRGHRHIDRGTFTGAVKVYPGTVMGQQTVGTTAAAAAL CCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCEEEEEEECCCCEECCCCCCCHHHHHHH GTNTGNGTFGAITVGAAKAGAYTVEFDDATHYVVSDPTGKEVGHGTTGVAFNAGGLGFTI CCCCCCCEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEE TAGGTAFVAGDSFTVTVAAGSGKWVPCVKTATDGSQIAAGISFGLVDATLNDTPGAIVVR EECCEEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEEEEEEEEEEEEECCCCCEEEEE DCEVNTSELVWDASMDAPAQAAALAALLALKIIAR ECCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SYVSRSPLIEQWHAGGFLVSQPRGHRHIDRGTFTGAVKVYPGTVMGQQTVGTTAAAAAL CCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCEEEEEEECCCCEECCCCCCCHHHHHHH GTNTGNGTFGAITVGAAKAGAYTVEFDDATHYVVSDPTGKEVGHGTTGVAFNAGGLGFTI CCCCCCCEEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEE TAGGTAFVAGDSFTVTVAAGSGKWVPCVKTATDGSQIAAGISFGLVDATLNDTPGAIVVR EECCEEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEEEEEEEEEEEEECCCCCEEEEE DCEVNTSELVWDASMDAPAQAAALAALLALKIIAR ECCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA