| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476637
Identifier: 186476637
GI number: 186476637
Start: 2140049
End: 2141086
Strand: Reverse
Name: 186476637
Synonym: Bphy_1882
Alternate gene names: NA
Gene position: 2141086-2140049 (Counterclockwise)
Preceding gene: 186476638
Following gene: 186476636
Centisome position: 61.54
GC content: 63.1
Gene sequence:
>1038_bases ATGGCATCGCTTGATATTTTCAACCAGGACCCGTTCTCGACCGTTTCGCTGACGGCGGCCGTCGACAAGTATCCGTACCA GCCGCAGACGCTCGGCGAACTGGGCATCTTCGACGACGACCCCATCCGTACGACGGCGCTGGTCGTCGAGCAGCGTCAAG GCCAACTCGTCGTGATCCCGCTGAGCGAGCGTGGCGAAGAGGGCACTCAGCGCACGACGGAAAAGCGTCAGGCGCGTTAC TTCGAAGTGCCGCGTCTGCGCCACGCCGATACGATCTACGCGAACGAACTGCAGAACATCCGCGCGTTCGGTACCGAGTC GGAGCTCATGCAGGTGCAGGACGAGGTTGCACGTCGCCTCGCAGGCCCGACGGGTCTGCTGAAAAACATCGAATACACGT GGGAATTCCAGCGCCTCGCAGCTGTGCAAGGAAAATTCACGGACGCCGATGGCACCGTGAAATACGACTGGTTCCAGGAA TTCGGCATCACGCCCGCGACCGAAGTCGGCTTCAACCTCGCTGCCGCCACCGCGAACTCGCTGCGCCCGCTCTGCAACCA GATCACGCGCTCGATGGCGCGTAAGGCGCAGGGTGCGTTCACGCCGTCGACGAAGATCTTCGCACTGTGCGGCGACGCGT TCTACGACGCGTTCGTGAACCACCCGGACGTGATCCGTACGTTCGTGAACTGGAGCGATGCTGTCGAGATCCGCGGCGGC AACTCCGGCGGCGCATTCCAGGCATTCGAATTCGGCGGCATCCGCTGGCTGAACTATCGCGGTTCGGACGACAACGCGAC GATCAAGATCGCCGACGACAAGGTCAAGTTCTTCCCGGTCGGCGCTCCCGGCATCTTCCGCCGCGCGCTCGCCCCGGGCG AGTCGTTCCAGTGGGTCAACACGCCCGGCAAGCCGGTCTACGTGGTGCCGATCATGGATCGTGACCGCGACGAGTGGTGG AAGATGGAAGTGTCGAGCTACCCGCTCCACATCTGCACCCGTCCGGAAGTGCTGTTCAGCGGCCGCTCGGAGGCGTAA
Upstream 100 bases:
>100_bases CGCTGCGCTGCTCGCGCTGAAGATCATCGCTCGCTGATCCCCACAACTCGAAAAAGACAGGCCGCCTTCGGGCGGCTTTT TCATTTGAAGGAGCCGTTCA
Downstream 100 bases:
>100_bases TGCCTGTCGACTGGAATGCCGAGGTCATCGGCCCGCTGATGGGTGTCTTCGGCGAGCCGGTCACCTATCGTCCACTCGCC GGCGGATCGCTCTCGATCAC
Product: putative phage protein GP20
Products: NA
Alternate protein names: Bacteriophage-Related Protein; Phage Related Protein; Phage Protein Gp; Phage-Like Protein; Bacteriophage-Like Protein
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MASLDIFNQDPFSTVSLTAAVDKYPYQPQTLGELGIFDDDPIRTTALVVEQRQGQLVVIPLSERGEEGTQRTTEKRQARY FEVPRLRHADTIYANELQNIRAFGTESELMQVQDEVARRLAGPTGLLKNIEYTWEFQRLAAVQGKFTDADGTVKYDWFQE FGITPATEVGFNLAAATANSLRPLCNQITRSMARKAQGAFTPSTKIFALCGDAFYDAFVNHPDVIRTFVNWSDAVEIRGG NSGGAFQAFEFGGIRWLNYRGSDDNATIKIADDKVKFFPVGAPGIFRRALAPGESFQWVNTPGKPVYVVPIMDRDRDEWW KMEVSSYPLHICTRPEVLFSGRSEA
Sequences:
>Translated_345_residues MASLDIFNQDPFSTVSLTAAVDKYPYQPQTLGELGIFDDDPIRTTALVVEQRQGQLVVIPLSERGEEGTQRTTEKRQARY FEVPRLRHADTIYANELQNIRAFGTESELMQVQDEVARRLAGPTGLLKNIEYTWEFQRLAAVQGKFTDADGTVKYDWFQE FGITPATEVGFNLAAATANSLRPLCNQITRSMARKAQGAFTPSTKIFALCGDAFYDAFVNHPDVIRTFVNWSDAVEIRGG NSGGAFQAFEFGGIRWLNYRGSDDNATIKIADDKVKFFPVGAPGIFRRALAPGESFQWVNTPGKPVYVVPIMDRDRDEWW KMEVSSYPLHICTRPEVLFSGRSEA >Mature_344_residues ASLDIFNQDPFSTVSLTAAVDKYPYQPQTLGELGIFDDDPIRTTALVVEQRQGQLVVIPLSERGEEGTQRTTEKRQARYF EVPRLRHADTIYANELQNIRAFGTESELMQVQDEVARRLAGPTGLLKNIEYTWEFQRLAAVQGKFTDADGTVKYDWFQEF GITPATEVGFNLAAATANSLRPLCNQITRSMARKAQGAFTPSTKIFALCGDAFYDAFVNHPDVIRTFVNWSDAVEIRGGN SGGAFQAFEFGGIRWLNYRGSDDNATIKIADDKVKFFPVGAPGIFRRALAPGESFQWVNTPGKPVYVVPIMDRDRDEWWK MEVSSYPLHICTRPEVLFSGRSEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38720; Mature: 38589
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLDIFNQDPFSTVSLTAAVDKYPYQPQTLGELGIFDDDPIRTTALVVEQRQGQLVVIP CCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEE LSERGEEGTQRTTEKRQARYFEVPRLRHADTIYANELQNIRAFGTESELMQVQDEVARRL CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AGPTGLLKNIEYTWEFQRLAAVQGKFTDADGTVKYDWFQEFGITPATEVGFNLAAATANS CCCHHHHHCCEEEEHHHHHHHHCCCEECCCCCEEEHHHHHHCCCCHHHHCCEEEEHHHHH LRPLCNQITRSMARKAQGAFTPSTKIFALCGDAFYDAFVNHPDVIRTFVNWSDAVEIRGG HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHCCCHHHHHHHHCCCCEEEEECC NSGGAFQAFEFGGIRWLNYRGSDDNATIKIADDKVKFFPVGAPGIFRRALAPGESFQWVN CCCCCEEEEECCCEEEEEEECCCCCCEEEEECCCEEEEECCCCHHHHHHCCCCCCEEEEC TPGKPVYVVPIMDRDRDEWWKMEVSSYPLHICTRPEVLFSGRSEA CCCCEEEEEEECCCCCCCCEEEEECCCCEEEECCCCEEECCCCCC >Mature Secondary Structure ASLDIFNQDPFSTVSLTAAVDKYPYQPQTLGELGIFDDDPIRTTALVVEQRQGQLVVIP CCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEE LSERGEEGTQRTTEKRQARYFEVPRLRHADTIYANELQNIRAFGTESELMQVQDEVARRL CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AGPTGLLKNIEYTWEFQRLAAVQGKFTDADGTVKYDWFQEFGITPATEVGFNLAAATANS CCCHHHHHCCEEEEHHHHHHHHCCCEECCCCCEEEHHHHHHCCCCHHHHCCEEEEHHHHH LRPLCNQITRSMARKAQGAFTPSTKIFALCGDAFYDAFVNHPDVIRTFVNWSDAVEIRGG HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHCCCHHHHHHHHCCCCEEEEECC NSGGAFQAFEFGGIRWLNYRGSDDNATIKIADDKVKFFPVGAPGIFRRALAPGESFQWVN CCCCCEEEEECCCEEEEEEECCCCCCEEEEECCCEEEEECCCCHHHHHHCCCCCCEEEEC TPGKPVYVVPIMDRDRDEWWKMEVSSYPLHICTRPEVLFSGRSEA CCCCEEEEEEECCCCCCCCEEEEECCCCEEEECCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA