| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476636
Identifier: 186476636
GI number: 186476636
Start: 2139717
End: 2140049
Strand: Reverse
Name: 186476636
Synonym: Bphy_1881
Alternate gene names: NA
Gene position: 2140049-2139717 (Counterclockwise)
Preceding gene: 186476637
Following gene: 186476635
Centisome position: 61.51
GC content: 60.36
Gene sequence:
>333_bases ATGCCTGTCGACTGGAATGCCGAGGTCATCGGCCCGCTGATGGGTGTCTTCGGCGAGCCGGTCACCTATCGTCCACTCGC CGGCGGATCGCTCTCGATCACCGGCGTGTTCGACAACGCGTATCTCAAGGAGGTGATGTTTGAGGACGCGACGTCGGGTG TGACCGAGGTGTCGGCGGTCCTCGGCGTCCAGTTGTCGCAATTTCCTTCGGATCCCATGCAAAACGATCAGCTCTCGGTG GCGAGCGTCAATACGACGTTCCTCGTTCGGGAGGTACGTGTGGATAGCCGAGGCGGTGCAAAGCTGCTGCTTAGCAAGGT GAGTTCGCCATGA
Upstream 100 bases:
>100_bases ATCGTGACCGCGACGAGTGGTGGAAGATGGAAGTGTCGAGCTACCCGCTCCACATCTGCACCCGTCCGGAAGTGCTGTTC AGCGGCCGCTCGGAGGCGTA
Downstream 100 bases:
>100_bases CGACGTCCGCAGATCTTCGCGCGCTGTTCGTCAACGCGCTCATCGGGGAGACGGATGCTGGCGCGTCGGTCTTTTCGCCA TTCGATTGGCCGACAGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MPVDWNAEVIGPLMGVFGEPVTYRPLAGGSLSITGVFDNAYLKEVMFEDATSGVTEVSAVLGVQLSQFPSDPMQNDQLSV ASVNTTFLVREVRVDSRGGAKLLLSKVSSP
Sequences:
>Translated_110_residues MPVDWNAEVIGPLMGVFGEPVTYRPLAGGSLSITGVFDNAYLKEVMFEDATSGVTEVSAVLGVQLSQFPSDPMQNDQLSV ASVNTTFLVREVRVDSRGGAKLLLSKVSSP >Mature_109_residues PVDWNAEVIGPLMGVFGEPVTYRPLAGGSLSITGVFDNAYLKEVMFEDATSGVTEVSAVLGVQLSQFPSDPMQNDQLSVA SVNTTFLVREVRVDSRGGAKLLLSKVSSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11691; Mature: 11560
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVDWNAEVIGPLMGVFGEPVTYRPLAGGSLSITGVFDNAYLKEVMFEDATSGVTEVSAV CCCCCCHHHHHHHHHHHCCCCEECCCCCCCEEEEEEECHHHHHHHHHHCCCCCHHHHHHH LGVQLSQFPSDPMQNDQLSVASVNTTFLVREVRVDSRGGAKLLLSKVSSP HHHHHHHCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCHHHHHHHCCCC >Mature Secondary Structure PVDWNAEVIGPLMGVFGEPVTYRPLAGGSLSITGVFDNAYLKEVMFEDATSGVTEVSAV CCCCCHHHHHHHHHHHCCCCEECCCCCCCEEEEEEECHHHHHHHHHHCCCCCHHHHHHH LGVQLSQFPSDPMQNDQLSVASVNTTFLVREVRVDSRGGAKLLLSKVSSP HHHHHHHCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA