| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476616
Identifier: 186476616
GI number: 186476616
Start: 2123014
End: 2123853
Strand: Reverse
Name: 186476616
Synonym: Bphy_1861
Alternate gene names: NA
Gene position: 2123853-2123014 (Counterclockwise)
Preceding gene: 186476617
Following gene: 186476615
Centisome position: 61.04
GC content: 54.64
Gene sequence:
>840_bases ATGGCTGAACCCCATTCTAGCCTAGCCGGGAAGAAGTTCTATTCGCTCACGTTCCTTCGCCCCACTACATCCGATCGTGG CATGATGCGCGGCCTCTTCAGATGTGACTGTGGTGCCGAGGCGGAGATCAGAATAGCATCCGTGAAAAGCGGCAATACGC GTTCGTGCGGATGCGGCAAAAGACGGCGCCCTCAAAACAGGATCAGCCTCGCTGGTGGTGAAAAATTTGGCATGCTTGCA TTCGTCAGCGATGCACCCAAGCGATCAGGGAATCCAAATCGAAGAGTCGTCGCACGTTGCGATTGCGGTTCGATCGGGGA ATATTTCTTGAGCGCGCTCAGAACGGGGAGTACCAAGTCTTGCGGGTGTTTGCGCGACGACCATTCAATTTATGAGACGC ATGGCCACACCTCTGCGCGCACATTCAGCCCTGAGTACTATACATGGACGTCGATGAAGACTCGCTGCACCAATGCGAAA TCGCGCGCATGGGCGGACTATGGCGGCCGAGGGATCACCGTCTGTGAACGTTGGATCGATTCATTTGAGAATTTTTTGGC CGATATGGGGCCTAGGCCACAGGGAATGACGCTTGATCGCTTTCCCGACAGCAATGGAAACTATGAGCCGGGAAACTGCC GTTGGGCTACCCCTGCGCAGCAGTCGGCCAACACGCGAAGAAACACGCTCGTCGAGTTCAATGGCGTCAAGAAAGCAATT TCTGAATGGGCGACAGAATATGGGCTCACGTACAACACGCTGATCGCGCGAATCCATCGCCTGAAATGGCCGATTGAAAA GGCTCTGACGACGCCGCCAAGACCATCGTATAAACGATGA
Upstream 100 bases:
>100_bases CCATCCATCACTATGATGTGGATGTAAAATGAGCGAGCCGCCAAGGTGCTACCAACACCAGGGCGGCTCTAACCACCAAT TGCCTGTGAAGAGGTAACCG
Downstream 100 bases:
>100_bases CCCCAACCCCGCTTCGGCGGGGTTTTTTATTGCCCATTCGAAGGAGCGCCTATGAATGACCTCATTAAGCCGGTCTCGGT CGGCCTGCTGTTCGTGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MAEPHSSLAGKKFYSLTFLRPTTSDRGMMRGLFRCDCGAEAEIRIASVKSGNTRSCGCGKRRRPQNRISLAGGEKFGMLA FVSDAPKRSGNPNRRVVARCDCGSIGEYFLSALRTGSTKSCGCLRDDHSIYETHGHTSARTFSPEYYTWTSMKTRCTNAK SRAWADYGGRGITVCERWIDSFENFLADMGPRPQGMTLDRFPDSNGNYEPGNCRWATPAQQSANTRRNTLVEFNGVKKAI SEWATEYGLTYNTLIARIHRLKWPIEKALTTPPRPSYKR
Sequences:
>Translated_279_residues MAEPHSSLAGKKFYSLTFLRPTTSDRGMMRGLFRCDCGAEAEIRIASVKSGNTRSCGCGKRRRPQNRISLAGGEKFGMLA FVSDAPKRSGNPNRRVVARCDCGSIGEYFLSALRTGSTKSCGCLRDDHSIYETHGHTSARTFSPEYYTWTSMKTRCTNAK SRAWADYGGRGITVCERWIDSFENFLADMGPRPQGMTLDRFPDSNGNYEPGNCRWATPAQQSANTRRNTLVEFNGVKKAI SEWATEYGLTYNTLIARIHRLKWPIEKALTTPPRPSYKR >Mature_278_residues AEPHSSLAGKKFYSLTFLRPTTSDRGMMRGLFRCDCGAEAEIRIASVKSGNTRSCGCGKRRRPQNRISLAGGEKFGMLAF VSDAPKRSGNPNRRVVARCDCGSIGEYFLSALRTGSTKSCGCLRDDHSIYETHGHTSARTFSPEYYTWTSMKTRCTNAKS RAWADYGGRGITVCERWIDSFENFLADMGPRPQGMTLDRFPDSNGNYEPGNCRWATPAQQSANTRRNTLVEFNGVKKAIS EWATEYGLTYNTLIARIHRLKWPIEKALTTPPRPSYKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31286; Mature: 31154
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPHSSLAGKKFYSLTFLRPTTSDRGMMRGLFRCDCGAEAEIRIASVKSGNTRSCGCGK CCCCCCHHCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCC RRRPQNRISLAGGEKFGMLAFVSDAPKRSGNPNRRVVARCDCGSIGEYFLSALRTGSTKS CCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCC CGCLRDDHSIYETHGHTSARTFSPEYYTWTSMKTRCTNAKSRAWADYGGRGITVCERWID CCCCCCCCCHHHCCCCCCCEECCCCEEEECCCHHHHCCCCHHHHHHCCCCHHHHHHHHHH SFENFLADMGPRPQGMTLDRFPDSNGNYEPGNCRWATPAQQSANTRRNTLVEFNGVKKAI HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHCCCHHHEEEEEHHHHHHH SEWATEYGLTYNTLIARIHRLKWPIEKALTTPPRPSYKR HHHHHHHCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC >Mature Secondary Structure AEPHSSLAGKKFYSLTFLRPTTSDRGMMRGLFRCDCGAEAEIRIASVKSGNTRSCGCGK CCCCCHHCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCC RRRPQNRISLAGGEKFGMLAFVSDAPKRSGNPNRRVVARCDCGSIGEYFLSALRTGSTKS CCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCC CGCLRDDHSIYETHGHTSARTFSPEYYTWTSMKTRCTNAKSRAWADYGGRGITVCERWID CCCCCCCCCHHHCCCCCCCEECCCCEEEECCCHHHHCCCCHHHHHHCCCCHHHHHHHHHH SFENFLADMGPRPQGMTLDRFPDSNGNYEPGNCRWATPAQQSANTRRNTLVEFNGVKKAI HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHCCCHHHEEEEEHHHHHHH SEWATEYGLTYNTLIARIHRLKWPIEKALTTPPRPSYKR HHHHHHHCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA