| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476579
Identifier: 186476579
GI number: 186476579
Start: 2080528
End: 2081559
Strand: Direct
Name: 186476579
Synonym: Bphy_1822
Alternate gene names: NA
Gene position: 2080528-2081559 (Clockwise)
Preceding gene: 186476575
Following gene: 186476580
Centisome position: 59.8
GC content: 68.9
Gene sequence:
>1032_bases ATGAATGGCGGTTTCCTACGTCCAGTCTTCCGTCTTTTTCTATTGGCCGTTTTTGCGGCCCTTGCCGCCATGATGTCGGG CTGCAGCCTGTTCGGACCGACCGAGCAGCCGCCTGCGCCCATTACCGAAGCGACCGTGACGCCGCTCGTCGTTCCCGCCC TCGAGCCCGCCTCCGAACCGGAGCCCGCCGAGGCGCCTGAGCCGAAGGAACCGAAGAAGCCGCGTCCGCCCGTCGTGCGC CCGCACAAGCCTGAGCCGCCGCCGCCCGTCGTGGCGCCCGCACCGCCGCCGCCTCCGCCGCCGCCCGCGCCCATCATCGT GATGCGCACGCTCGATCGCAGCGCGATGCACGGCCTGCTCGACAGTGAAGTGCAGAAGTCCGACGGCAAGGTGCTCGGGC GCGCCGTCGACATGACGGCGGATGCGAGCGGCACACCGCGCCAGATGATCGTCAATCTGCAGGGCTTTCTGGGCGTCGGC GACCGCAAGGTGGGTTTCCCGTGGACTGCTTTCCGCTTTACGCCGGGCGCGAAAGGCGCGCCCATCACGATCACGACGCC GCCAAACCAGCTTGCTGCGACGAACCGGCCAAAACCGTCGGCGTCGCTGGCGTCGCCGCTTGCCGGCGGCGTCACGGCCG CGCCCGCGGTGCCTCCCGGCCAGCTGGAACTGATCGACGCGGACGTCGAGCGTCCGAGCGGCGGCAAGGTGGGCCGCGTG ATCGACGTGCTGATCGATGCGAACGCGCAGCCGCAGGCCGTCGTGCTCGACGTCAGCGGCATCATCAGCGCCGATCGGCG GACGATCGCCGCGAACTGGTCGGCGCTGCGTTTCGTCACGAAGGACAAGACGCTGCGCCCGCTGATGGATCTCAACGACG CGCAAATCAAGGCGTCGCCATCTTACGAGCCGGACAAGCCGATTCGCGCGGTGTCGCCCGCACCGCCTCCCGCACCTGTT GCCGCGTCTGCCGCGGCAACAGGCTCTTCGTCGTCCACTGCGGCGGCTTCAACCGCACGCACTTCACGATGA
Upstream 100 bases:
>100_bases GCATTCCCGGCGAGGCTTTCGATGCCTGCATGGATCACTGGATCGTTCCTTGCTACAGCGTCCGCATCGGCCCGCCGCCC TGGCCACGGAGTCCCACTTG
Downstream 100 bases:
>100_bases CGAGCCGTCCAATGGTCAACGCACGCAGTCTCCGCGCCCTCGACTGGCTCAACTTTTTCGTCGCCAACGTGCAGACGGGG TTCGGGCCGTTCATTGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MNGGFLRPVFRLFLLAVFAALAAMMSGCSLFGPTEQPPAPITEATVTPLVVPALEPASEPEPAEAPEPKEPKKPRPPVVR PHKPEPPPPVVAPAPPPPPPPPAPIIVMRTLDRSAMHGLLDSEVQKSDGKVLGRAVDMTADASGTPRQMIVNLQGFLGVG DRKVGFPWTAFRFTPGAKGAPITITTPPNQLAATNRPKPSASLASPLAGGVTAAPAVPPGQLELIDADVERPSGGKVGRV IDVLIDANAQPQAVVLDVSGIISADRRTIAANWSALRFVTKDKTLRPLMDLNDAQIKASPSYEPDKPIRAVSPAPPPAPV AASAAATGSSSSTAAASTARTSR
Sequences:
>Translated_343_residues MNGGFLRPVFRLFLLAVFAALAAMMSGCSLFGPTEQPPAPITEATVTPLVVPALEPASEPEPAEAPEPKEPKKPRPPVVR PHKPEPPPPVVAPAPPPPPPPPAPIIVMRTLDRSAMHGLLDSEVQKSDGKVLGRAVDMTADASGTPRQMIVNLQGFLGVG DRKVGFPWTAFRFTPGAKGAPITITTPPNQLAATNRPKPSASLASPLAGGVTAAPAVPPGQLELIDADVERPSGGKVGRV IDVLIDANAQPQAVVLDVSGIISADRRTIAANWSALRFVTKDKTLRPLMDLNDAQIKASPSYEPDKPIRAVSPAPPPAPV AASAAATGSSSSTAAASTARTSR >Mature_343_residues MNGGFLRPVFRLFLLAVFAALAAMMSGCSLFGPTEQPPAPITEATVTPLVVPALEPASEPEPAEAPEPKEPKKPRPPVVR PHKPEPPPPVVAPAPPPPPPPPAPIIVMRTLDRSAMHGLLDSEVQKSDGKVLGRAVDMTADASGTPRQMIVNLQGFLGVG DRKVGFPWTAFRFTPGAKGAPITITTPPNQLAATNRPKPSASLASPLAGGVTAAPAVPPGQLELIDADVERPSGGKVGRV IDVLIDANAQPQAVVLDVSGIISADRRTIAANWSALRFVTKDKTLRPLMDLNDAQIKASPSYEPDKPIRAVSPAPPPAPV AASAAATGSSSSTAAASTARTSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35466; Mature: 35466
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGGFLRPVFRLFLLAVFAALAAMMSGCSLFGPTEQPPAPITEATVTPLVVPALEPASEP CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC EPAEAPEPKEPKKPRPPVVRPHKPEPPPPVVAPAPPPPPPPPAPIIVMRTLDRSAMHGLL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCHHHHHHHH DSEVQKSDGKVLGRAVDMTADASGTPRQMIVNLQGFLGVGDRKVGFPWTAFRFTPGAKGA HHHHHHCCCCEEEEEEEECCCCCCCCHHEEEEEHHHCCCCCCCCCCCEEEEEECCCCCCC PITITTPPNQLAATNRPKPSASLASPLAGGVTAAPAVPPGQLELIDADVERPSGGKVGRV CEEEECCCCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHEE IDVLIDANAQPQAVVLDVSGIISADRRTIAANWSALRFVTKDKTLRPLMDLNDAQIKASP EEEEECCCCCCCEEEEEECCHHCCCCEEEEECCCEEEEEECCCCHHHHHCCCCCEEEECC SYEPDKPIRAVSPAPPPAPVAASAAATGSSSSTAAASTARTSR CCCCCCCCEECCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCCC >Mature Secondary Structure MNGGFLRPVFRLFLLAVFAALAAMMSGCSLFGPTEQPPAPITEATVTPLVVPALEPASEP CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC EPAEAPEPKEPKKPRPPVVRPHKPEPPPPVVAPAPPPPPPPPAPIIVMRTLDRSAMHGLL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCHHHHHHHH DSEVQKSDGKVLGRAVDMTADASGTPRQMIVNLQGFLGVGDRKVGFPWTAFRFTPGAKGA HHHHHHCCCCEEEEEEEECCCCCCCCHHEEEEEHHHCCCCCCCCCCCEEEEEECCCCCCC PITITTPPNQLAATNRPKPSASLASPLAGGVTAAPAVPPGQLELIDADVERPSGGKVGRV CEEEECCCCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHEE IDVLIDANAQPQAVVLDVSGIISADRRTIAANWSALRFVTKDKTLRPLMDLNDAQIKASP EEEEECCCCCCCEEEEEECCHHCCCCEEEEECCCEEEEEECCCCHHHHHCCCCCEEEECC SYEPDKPIRAVSPAPPPAPVAASAAATGSSSSTAAASTARTSR CCCCCCCCEECCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA