| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476576
Identifier: 186476576
GI number: 186476576
Start: 2076940
End: 2077716
Strand: Reverse
Name: 186476576
Synonym: Bphy_1818
Alternate gene names: NA
Gene position: 2077716-2076940 (Counterclockwise)
Preceding gene: 186476577
Following gene: 186476573
Centisome position: 59.72
GC content: 62.93
Gene sequence:
>777_bases ATGGAAGAGCACAGGATCGTTTCACGCGAAGCATGGCTGGCCGCGCAACGCGCGCATCTCGCGGACGAAAAGGCATTGAC GCGCGCACGGGATGCGCTCGTGAAAAAGCGTCTCGCGCTGCCGTGGATGAAGATCGACAAGCGCTACACCTTCGACACAG ACGAAGGCACGAAGACGCTCGACGATCTGTTCGCGGGACGCAGCCAGCTGATCGTCTATCACTTCATGTTCGGTCCCGAC TGGGAGCAGGGCTGCCCGGGCTGCTCGTTCCTGTCGGATCACATCGACGGCGCGCTCGTGCATCTCGCGCACCGCGACGT GACGTACGTCGCCGTGTCGCGCGCGCCGCTCGTGAAGATCGACGCTTACCGCAAACGCATGGGATGGAAGTTTCCGTGGG TCTCGTCGTTCGGCAGCGACTTCAACTACGACTTCAACGTGTCGTTCACACCCGAACAGCAGGCCACGGGCAAGGTCGAC TACAACTATGACATGCAGGGCTTCGCGATGGATGAACTGCCTGGCATGAGCGTGTTCTACAGGAACGGGAACGGCGAGAT CTTCCGCACGTTCTCGGCGTACGCGCGCAGCGGCGAGCCGCTGATCGGCACGTATGCGCTGCTCGATTGCGTGCCGAAGG GCCGCGATGAAGACGAGAACAAGATGATGGGCTGGCTGCGCCGCCACGACAGTTACGAGGATGGCGCGACGGGCACGACG CTGGCGGCGGGCAAACAGCGCGCGGGCGCCTGCTGTCACGAAGGGACCCCGAAGTGA
Upstream 100 bases:
>100_bases CGCTGGATGGACGGACACGCTGGACGGACTCGAACGCTATTTCTCGTGACGGCCGCGCTAGCCCTGAACGGGCGAGCGGA CCGCGCAACCGGAGGGACTG
Downstream 100 bases:
>100_bases AGCGTCCGTGACAGGCTTCGTTCGGACCCGCGTTTACAGCGACAATTCGAACGCGGGACGAAGAAACACCTGGATGCCCA TCACCACGAGACCCATTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MEEHRIVSREAWLAAQRAHLADEKALTRARDALVKKRLALPWMKIDKRYTFDTDEGTKTLDDLFAGRSQLIVYHFMFGPD WEQGCPGCSFLSDHIDGALVHLAHRDVTYVAVSRAPLVKIDAYRKRMGWKFPWVSSFGSDFNYDFNVSFTPEQQATGKVD YNYDMQGFAMDELPGMSVFYRNGNGEIFRTFSAYARSGEPLIGTYALLDCVPKGRDEDENKMMGWLRRHDSYEDGATGTT LAAGKQRAGACCHEGTPK
Sequences:
>Translated_258_residues MEEHRIVSREAWLAAQRAHLADEKALTRARDALVKKRLALPWMKIDKRYTFDTDEGTKTLDDLFAGRSQLIVYHFMFGPD WEQGCPGCSFLSDHIDGALVHLAHRDVTYVAVSRAPLVKIDAYRKRMGWKFPWVSSFGSDFNYDFNVSFTPEQQATGKVD YNYDMQGFAMDELPGMSVFYRNGNGEIFRTFSAYARSGEPLIGTYALLDCVPKGRDEDENKMMGWLRRHDSYEDGATGTT LAAGKQRAGACCHEGTPK >Mature_258_residues MEEHRIVSREAWLAAQRAHLADEKALTRARDALVKKRLALPWMKIDKRYTFDTDEGTKTLDDLFAGRSQLIVYHFMFGPD WEQGCPGCSFLSDHIDGALVHLAHRDVTYVAVSRAPLVKIDAYRKRMGWKFPWVSSFGSDFNYDFNVSFTPEQQATGKVD YNYDMQGFAMDELPGMSVFYRNGNGEIFRTFSAYARSGEPLIGTYALLDCVPKGRDEDENKMMGWLRRHDSYEDGATGTT LAAGKQRAGACCHEGTPK
Specific function: Unknown
COG id: COG4312
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29249; Mature: 29249
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEHRIVSREAWLAAQRAHLADEKALTRARDALVKKRLALPWMKIDKRYTFDTDEGTKTL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEECCCCCCHHHH DDLFAGRSQLIVYHFMFGPDWEQGCPGCSFLSDHIDGALVHLAHRDVTYVAVSRAPLVKI HHHHCCCCEEEEEEEEECCCHHHCCCCHHHHHHHCCCEEEEEECCCEEEEEECCCCEEEH DAYRKRMGWKFPWVSSFGSDFNYDFNVSFTPEQQATGKVDYNYDMQGFAMDELPGMSVFY HHHHHHCCCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCEEEE RNGNGEIFRTFSAYARSGEPLIGTYALLDCVPKGRDEDENKMMGWLRRHDSYEDGATGTT ECCCCCEEEEEHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCE LAAGKQRAGACCHEGTPK ECCCCHHCCCCCCCCCCC >Mature Secondary Structure MEEHRIVSREAWLAAQRAHLADEKALTRARDALVKKRLALPWMKIDKRYTFDTDEGTKTL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEECCCCCCHHHH DDLFAGRSQLIVYHFMFGPDWEQGCPGCSFLSDHIDGALVHLAHRDVTYVAVSRAPLVKI HHHHCCCCEEEEEEEEECCCHHHCCCCHHHHHHHCCCEEEEEECCCEEEEEECCCCEEEH DAYRKRMGWKFPWVSSFGSDFNYDFNVSFTPEQQATGKVDYNYDMQGFAMDELPGMSVFY HHHHHHCCCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCEEEE RNGNGEIFRTFSAYARSGEPLIGTYALLDCVPKGRDEDENKMMGWLRRHDSYEDGATGTT ECCCCCEEEEEHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCE LAAGKQRAGACCHEGTPK ECCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA