BacMap

Definition	Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession	NC_010622
Length	3,479,187

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The map label for this gene is astD [H]

Identifier: 186476542

GI number: 186476542

Start: 2039004

End: 2040467

Strand: Reverse

Name: astD [H]

Synonym: Bphy_1784

Alternate gene names: 186476542

Gene position: 2040467-2039004 (Counterclockwise)

Preceding gene: 186476543

Following gene: 186476541

Centisome position: 58.65

GC content: 67.08

Gene sequence:

>1464_bases
ATGAGCGAGCTTTTCATCGACGGCGAATGGGTCGCCGGCACAGGACACGCATTCGCATCGCGCAACCCGGGCACGGGCGC
GACGGTGTGGGAAGGCAATAGCGCGTCGGCAGAAGACGTCGATCGCGCCGTCATGAGCGCGCGCCGTGCGTTCGCGATGT
GGTCGTCCGTGAGCCTCGACGAACGCGTCGCCGTCGTGCGCCGCTTCGCTGCGTTGATCAACGAGCGCAAGGAGTCGATC
GCCGAGGCGATCGGCCGCGAGACGGGCAAGCCGTTGTGGGAGGCCCGCACGGAAGTCGCGTCGATGTCGGCGAAGGTCGA
CATCTCCGTCCAGTCGTACAACGAGCGCACGGGCGAGCGGCGCACCGCGATGGCGGACGGCACTGCCGTGCTGCGTCATC
GTCCGCATGGCGTGGTCGCCGTGTTCGGTCCGTACAACTTTCCGGGGCACTTGCCGAACGGGCACATCGTGCCCGCGCTG
ATCGCGGGCAACACCGTCGTGTTCAAGCCGTCGGAACTCGCGCCGGGCGTGGCGCGTGCGACCGTCCAGGTGTGGCGCGA
TGCGGGCTTGCCTGCGGGCGTGCTGAATCTCGTGCAGGGCGAGAAGGACACGGGCGTGGCGCTTGCGAATCACCGGCAGA
TCGATGGTCTGTTCTTCACGGGCAGCTCGGACACGGGCACGCTGTTGCACAAGCAGTTCGGCGGCCGTCCCGAGATCGTG
CTCGCGCTGGAGATGGGCGGCAACAATCCCCTCGTGATCGCGCCCGTCGCCGATCTCGACGCTGCCGTGCATCACACGAT
TCAATCGGCGTTTCTGTCGGCGGGGCAGCGCTGCACCTGTGCGCGCCGCATCTTCGTGCCGAACGACGCGTTCGGCGAGC
GGTTCATTGCGCGCTTCGTCGAAGTGAGTTCGCACATCGCGGTCGGCGAATACAACGCCGATCCGCAGCCGTACATGGGC
GCCGTGATTTCGGCGCGTGCGGCGGCGCGTCTCGTCGACGCGCAGGCGCGTCTGCTCGCCGAAGGCGCGAAGCCGCTGCT
GCGCATGACGCAGCGCGATCCCAAGCTGGGCTTCGTGACGCCCGCCGTTCTCGATGTCACGAACGTGCAGAACCTGCCCG
ACGAAGAACATTTCGGACCGCTCGCGCAGATCGTCCGTTACGGCTCGTTCGACGAAGCGATCGCGGGCGCGAACGATACC
GAGTTCGGTTTGTCCGCGGGCCTGCTTGCCGACGACGAGATGTTGTGGACGCACTTCCAGCGCACGATCCGCGCCGGCAT
CGTGAACTGGAACCGGCCGACCAATGGCGCGTCGTCGGCGGCGCCGTTCGGCGGCACGGGCCGCTCGGGCAACAACCGGC
CGAGCGCGTATTACGCAGCCGATTACTGCGCGTACCCGATGGCCTCCGTTGAAAGCGCGCAACTGCAGATGCCCGCGAGC
GTGTCGCCGGGTCTTCATTTCTAA

Upstream 100 bases:

>100_bases
GGCGTGTTCCGTCTGGCGGCGGACGAGGCGGCGGCATTGAACGTGAAGGCAGGCGAGCTGGTGCGCGTGCTGCCGTTGAA
ACAGAAATAAGGACCAACAC

Downstream 100 bases:

>100_bases
GGATCGACGATGCAAGCCACTGAAGCCAATTTCGACGGACTCGTTGGACCGACCCACAATTACGCAGGGCTGTCGTTCGG
CAACGTCGCGTCGCAGAACA

Product: succinylglutamic semialdehyde dehydrogenase

Products: NA

Alternate protein names: Succinylglutamic semialdehyde dehydrogenase; SGSD [H]

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MSELFIDGEWVAGTGHAFASRNPGTGATVWEGNSASAEDVDRAVMSARRAFAMWSSVSLDERVAVVRRFAALINERKESI
AEAIGRETGKPLWEARTEVASMSAKVDISVQSYNERTGERRTAMADGTAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPAL
IAGNTVVFKPSELAPGVARATVQVWRDAGLPAGVLNLVQGEKDTGVALANHRQIDGLFFTGSSDTGTLLHKQFGGRPEIV
LALEMGGNNPLVIAPVADLDAAVHHTIQSAFLSAGQRCTCARRIFVPNDAFGERFIARFVEVSSHIAVGEYNADPQPYMG
AVISARAAARLVDAQARLLAEGAKPLLRMTQRDPKLGFVTPAVLDVTNVQNLPDEEHFGPLAQIVRYGSFDEAIAGANDT
EFGLSAGLLADDEMLWTHFQRTIRAGIVNWNRPTNGASSAAPFGGTGRSGNNRPSAYYAADYCAYPMASVESAQLQMPAS
VSPGLHF

Sequences:

>Translated_487_residues
MSELFIDGEWVAGTGHAFASRNPGTGATVWEGNSASAEDVDRAVMSARRAFAMWSSVSLDERVAVVRRFAALINERKESI
AEAIGRETGKPLWEARTEVASMSAKVDISVQSYNERTGERRTAMADGTAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPAL
IAGNTVVFKPSELAPGVARATVQVWRDAGLPAGVLNLVQGEKDTGVALANHRQIDGLFFTGSSDTGTLLHKQFGGRPEIV
LALEMGGNNPLVIAPVADLDAAVHHTIQSAFLSAGQRCTCARRIFVPNDAFGERFIARFVEVSSHIAVGEYNADPQPYMG
AVISARAAARLVDAQARLLAEGAKPLLRMTQRDPKLGFVTPAVLDVTNVQNLPDEEHFGPLAQIVRYGSFDEAIAGANDT
EFGLSAGLLADDEMLWTHFQRTIRAGIVNWNRPTNGASSAAPFGGTGRSGNNRPSAYYAADYCAYPMASVESAQLQMPAS
VSPGLHF
>Mature_486_residues
SELFIDGEWVAGTGHAFASRNPGTGATVWEGNSASAEDVDRAVMSARRAFAMWSSVSLDERVAVVRRFAALINERKESIA
EAIGRETGKPLWEARTEVASMSAKVDISVQSYNERTGERRTAMADGTAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALI
AGNTVVFKPSELAPGVARATVQVWRDAGLPAGVLNLVQGEKDTGVALANHRQIDGLFFTGSSDTGTLLHKQFGGRPEIVL
ALEMGGNNPLVIAPVADLDAAVHHTIQSAFLSAGQRCTCARRIFVPNDAFGERFIARFVEVSSHIAVGEYNADPQPYMGA
VISARAAARLVDAQARLLAEGAKPLLRMTQRDPKLGFVTPAVLDVTNVQNLPDEEHFGPLAQIVRYGSFDEAIAGANDTE
FGLSAGLLADDEMLWTHFQRTIRAGIVNWNRPTNGASSAAPFGGTGRSGNNRPSAYYAADYCAYPMASVESAQLQMPASV
SPGLHF

Specific function: Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family. AstD subfamily [H]

Homologues:

Organism=Homo sapiens, GI25777724, Length=459, Percent_Identity=32.8976034858388, Blast_Score=216, Evalue=5e-56,
Organism=Homo sapiens, GI153266822, Length=480, Percent_Identity=30.625, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI21361176, Length=482, Percent_Identity=32.1576763485477, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI12007648, Length=483, Percent_Identity=31.8840579710145, Blast_Score=198, Evalue=8e-51,
Organism=Homo sapiens, GI25777730, Length=466, Percent_Identity=30.9012875536481, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI25777732, Length=470, Percent_Identity=29.7872340425532, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI115387104, Length=491, Percent_Identity=30.5498981670061, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI25777728, Length=324, Percent_Identity=36.4197530864198, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI25777726, Length=466, Percent_Identity=30.0429184549356, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI11095441, Length=440, Percent_Identity=27.2727272727273, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI21614513, Length=472, Percent_Identity=29.0254237288136, Blast_Score=155, Evalue=1e-37,
Organism=Homo sapiens, GI238814322, Length=468, Percent_Identity=29.2735042735043, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI4507229, Length=467, Percent_Identity=28.2655246252677, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI310128093, Length=472, Percent_Identity=26.0593220338983, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI188035924, Length=472, Percent_Identity=26.0593220338983, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI310128103, Length=472, Percent_Identity=26.0593220338983, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI25777721, Length=480, Percent_Identity=27.7083333333333, Blast_Score=147, Evalue=3e-35,
Organism=Homo sapiens, GI25952152, Length=476, Percent_Identity=28.1512605042017, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI310128091, Length=472, Percent_Identity=25.8474576271186, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI301500698, Length=471, Percent_Identity=27.3885350318471, Blast_Score=133, Evalue=5e-31,
Organism=Homo sapiens, GI4502043, Length=427, Percent_Identity=26.9320843091335, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI238814371, Length=427, Percent_Identity=26.9320843091335, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI238859541, Length=433, Percent_Identity=26.0969976905312, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI25777736, Length=433, Percent_Identity=26.0969976905312, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI25777734, Length=433, Percent_Identity=26.0969976905312, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI206597441, Length=418, Percent_Identity=26.555023923445, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI206597439, Length=418, Percent_Identity=26.555023923445, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI22907049, Length=418, Percent_Identity=26.555023923445, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI310128087, Length=294, Percent_Identity=27.5510204081633, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI310128089, Length=298, Percent_Identity=27.5167785234899, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI71773324, Length=341, Percent_Identity=28.7390029325513, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI4557303, Length=418, Percent_Identity=23.9234449760766, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI73466520, Length=418, Percent_Identity=23.9234449760766, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI73695881, Length=345, Percent_Identity=27.2463768115942, Blast_Score=100, Evalue=6e-21,
Organism=Homo sapiens, GI73695879, Length=345, Percent_Identity=27.2463768115942, Blast_Score=100, Evalue=6e-21,
Organism=Homo sapiens, GI310128095, Length=314, Percent_Identity=26.1146496815287, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI310128097, Length=262, Percent_Identity=27.0992366412214, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI310128099, Length=242, Percent_Identity=25.2066115702479, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI310128101, Length=238, Percent_Identity=26.0504201680672, Blast_Score=80, Evalue=3e-15,
Organism=Escherichia coli, GI1788042, Length=486, Percent_Identity=55.761316872428, Blast_Score=561, Evalue=1e-161,
Organism=Escherichia coli, GI1789015, Length=463, Percent_Identity=32.6133909287257, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1787558, Length=467, Percent_Identity=31.6916488222698, Blast_Score=184, Evalue=1e-47,
Organism=Escherichia coli, GI1786504, Length=489, Percent_Identity=30.879345603272, Blast_Score=181, Evalue=8e-47,
Organism=Escherichia coli, GI1787684, Length=413, Percent_Identity=31.2348668280872, Blast_Score=179, Evalue=3e-46,
Organism=Escherichia coli, GI87082295, Length=468, Percent_Identity=29.7008547008547, Blast_Score=165, Evalue=6e-42,
Organism=Escherichia coli, GI87081926, Length=450, Percent_Identity=29.1111111111111, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI87081896, Length=467, Percent_Identity=29.5503211991435, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1787250, Length=437, Percent_Identity=28.3752860411899, Blast_Score=145, Evalue=8e-36,
Organism=Escherichia coli, GI1787715, Length=472, Percent_Identity=27.9661016949153, Blast_Score=135, Evalue=8e-33,
Organism=Caenorhabditis elegans, GI17562198, Length=492, Percent_Identity=30.2845528455285, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI25143876, Length=460, Percent_Identity=30.8695652173913, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI25143874, Length=460, Percent_Identity=30.8695652173913, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI25144435, Length=489, Percent_Identity=28.8343558282209, Blast_Score=186, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17551164, Length=468, Percent_Identity=30.3418803418803, Blast_Score=180, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17534119, Length=459, Percent_Identity=27.2331154684096, Blast_Score=174, Evalue=9e-44,
Organism=Caenorhabditis elegans, GI71995606, Length=454, Percent_Identity=30.3964757709251, Blast_Score=172, Evalue=5e-43,
Organism=Caenorhabditis elegans, GI133930964, Length=463, Percent_Identity=28.5097192224622, Blast_Score=167, Evalue=8e-42,
Organism=Caenorhabditis elegans, GI71995613, Length=408, Percent_Identity=30.8823529411765, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI32564736, Length=428, Percent_Identity=28.7383177570093, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI115534176, Length=469, Percent_Identity=27.9317697228145, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI71986308, Length=440, Percent_Identity=27.0454545454545, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI17534447, Length=455, Percent_Identity=25.2747252747253, Blast_Score=108, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI32566756, Length=429, Percent_Identity=24.7086247086247, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI25146394, Length=429, Percent_Identity=24.7086247086247, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI25146391, Length=429, Percent_Identity=24.7086247086247, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI115532534, Length=336, Percent_Identity=27.0833333333333, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI32564151, Length=417, Percent_Identity=25.6594724220624, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17564084, Length=432, Percent_Identity=25.9259259259259, Blast_Score=96, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI71990744, Length=305, Percent_Identity=23.2786885245902, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320917, Length=454, Percent_Identity=31.2775330396476, Blast_Score=195, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6319478, Length=467, Percent_Identity=28.9079229122056, Blast_Score=189, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6323821, Length=472, Percent_Identity=29.2372881355932, Blast_Score=185, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6323822, Length=467, Percent_Identity=29.3361884368308, Blast_Score=181, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6324950, Length=455, Percent_Identity=29.8901098901099, Blast_Score=175, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6325196, Length=456, Percent_Identity=28.0701754385965, Blast_Score=167, Evalue=5e-42,
Organism=Saccharomyces cerevisiae, GI6321826, Length=487, Percent_Identity=26.2833675564682, Blast_Score=109, Evalue=8e-25,
Organism=Saccharomyces cerevisiae, GI6321828, Length=458, Percent_Identity=24.235807860262, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6323757, Length=336, Percent_Identity=25.297619047619, Blast_Score=77, Evalue=5e-15,
Organism=Drosophila melanogaster, GI20129399, Length=492, Percent_Identity=32.1138211382114, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI281362580, Length=472, Percent_Identity=29.6610169491525, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI62472918, Length=472, Percent_Identity=29.6610169491525, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI62472926, Length=472, Percent_Identity=29.6610169491525, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI62472936, Length=472, Percent_Identity=29.6610169491525, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI21356737, Length=472, Percent_Identity=29.6610169491525, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI24650465, Length=465, Percent_Identity=30.3225806451613, Blast_Score=174, Evalue=9e-44,
Organism=Drosophila melanogaster, GI24585660, Length=471, Percent_Identity=29.5116772823779, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24666674, Length=483, Percent_Identity=28.3643892339545, Blast_Score=156, Evalue=3e-38,
Organism=Drosophila melanogaster, GI24638876, Length=439, Percent_Identity=29.3849658314351, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI24638878, Length=439, Percent_Identity=29.3849658314351, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI281360303, Length=432, Percent_Identity=26.1574074074074, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI45552499, Length=432, Percent_Identity=26.1574074074074, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI28571806, Length=430, Percent_Identity=25.8139534883721, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI28571802, Length=430, Percent_Identity=25.8139534883721, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI28571800, Length=430, Percent_Identity=25.8139534883721, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24668425, Length=445, Percent_Identity=26.2921348314607, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24668417, Length=445, Percent_Identity=26.2921348314607, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24668413, Length=445, Percent_Identity=26.2921348314607, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI28571798, Length=430, Percent_Identity=25.8139534883721, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI28571796, Length=430, Percent_Identity=25.8139534883721, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI28571794, Length=430, Percent_Identity=25.8139534883721, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI281360299, Length=432, Percent_Identity=25.9259259259259, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI281360297, Length=432, Percent_Identity=25.9259259259259, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI281360295, Length=432, Percent_Identity=25.9259259259259, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24586250, Length=432, Percent_Identity=25.9259259259259, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI281360301, Length=432, Percent_Identity=25.9259259259259, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28574525, Length=448, Percent_Identity=25.8928571428571, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI281360293, Length=252, Percent_Identity=26.1904761904762, Blast_Score=78, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR017649 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.71 [H]

Molecular weight: Translated: 52072; Mature: 51941

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS ; PS00177 TOPOISOMERASE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELFIDGEWVAGTGHAFASRNPGTGATVWEGNSASAEDVDRAVMSARRAFAMWSSVSLD
CCCEEECCEEEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHH
ERVAVVRRFAALINERKESIAEAIGRETGKPLWEARTEVASMSAKVDISVQSYNERTGER
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEEEECCCCCCCCH
RTAMADGTAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAPGVARA
HHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEECCEEEECCHHHCCCHHHH
TVQVWRDAGLPAGVLNLVQGEKDTGVALANHRQIDGLFFTGSSDTGTLLHKQFGGRPEIV
HHHHHHHCCCCHHHHHHHCCCCCCCEEEECCCEECEEEEECCCCCCHHHHHHHCCCCCEE
LALEMGGNNPLVIAPVADLDAAVHHTIQSAFLSAGQRCTCARRIFVPNDAFGERFIARFV
EEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHH
EVSSHIAVGEYNADPQPYMGAVISARAAARLVDAQARLLAEGAKPLLRMTQRDPKLGFVT
HHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCC
PAVLDVTNVQNLPDEEHFGPLAQIVRYGSFDEAIAGANDTEFGLSAGLLADDEMLWTHFQ
HHHHHHHCCCCCCCHHHCCHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
RTIRAGIVNWNRPTNGASSAAPFGGTGRSGNNRPSAYYAADYCAYPMASVESAQLQMPAS
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCHHEECCCC
VSPGLHF
CCCCCCC
>Mature Secondary Structure 
SELFIDGEWVAGTGHAFASRNPGTGATVWEGNSASAEDVDRAVMSARRAFAMWSSVSLD
CCEEECCEEEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHH
ERVAVVRRFAALINERKESIAEAIGRETGKPLWEARTEVASMSAKVDISVQSYNERTGER
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEEEECCCCCCCCH
RTAMADGTAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALIAGNTVVFKPSELAPGVARA
HHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEECCEEEECCHHHCCCHHHH
TVQVWRDAGLPAGVLNLVQGEKDTGVALANHRQIDGLFFTGSSDTGTLLHKQFGGRPEIV
HHHHHHHCCCCHHHHHHHCCCCCCCEEEECCCEECEEEEECCCCCCHHHHHHHCCCCCEE
LALEMGGNNPLVIAPVADLDAAVHHTIQSAFLSAGQRCTCARRIFVPNDAFGERFIARFV
EEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHH
EVSSHIAVGEYNADPQPYMGAVISARAAARLVDAQARLLAEGAKPLLRMTQRDPKLGFVT
HHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCC
PAVLDVTNVQNLPDEEHFGPLAQIVRYGSFDEAIAGANDTEFGLSAGLLADDEMLWTHFQ
HHHHHHHCCCCCCCHHHCCHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
RTIRAGIVNWNRPTNGASSAAPFGGTGRSGNNRPSAYYAADYCAYPMASVESAQLQMPAS
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCHHEECCCC
VSPGLHF
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA