Click here to switch to the map view.

The map label for this gene is yuxH [H]

Identifier: 186476537

GI number: 186476537

Start: 2033137

End: 2034489

Strand: Reverse

Name: yuxH [H]

Synonym: Bphy_1779

Alternate gene names: 186476537

Gene position: 2034489-2033137 (Counterclockwise)

Preceding gene: 186476538

Following gene: 186476534

Centisome position: 58.48

GC content: 64.67

Gene sequence:

>1353_bases
ATGACCATCACCGCAGTCGCTGAACGCCACGCAGAAGGCGTTCCGGGCATCACGCAGGATGCGCGCGCAAACGTTTCGTT
TGCCCGTCAGTCCATCCTGAACCGCGACAACATGCTGTGCGCGTTCGAACTCAAACTGTATCAAGCGCCAGTCGCCGAAA
CCCGCGAAGCCGCAGAAGTGACGGACAGCGAACGGCCGAAGCCCGGTCCGAGCGCCGCCGAGCGCTTCATCCAGGCCGTG
TTGCAGCAGGACGTGCGCGCCGCGCTCGCCAATCATCCGGGCTACCTGCCCGTCACGCGTGAGCTGCTGTTCGACGAGGC
CATCCGCAGCCTGCCCGCCGAGCGTTTCATGCTCGAGCTGCCGCCCGACATCGTTGCGGACGACACGCTGATCGCACGCC
TCGTCGAACTGCATGGCCGCCGCTATCGCTTCGTGATCGACAACGTTGCGCAAGCCGACGAAACCTTCGCGCGTCTGCTG
CCTTACGCAGACGCTGTGAAGATCGACATGAACCGCATCCCGCAGGCCGTGCTGCCCAAATTCGCGAGCGTGCTGAAATC
GGCGGGCAAGCTGCTGATCGCGCAGGGCGTCGAATCGCAAGAGGTGTTCGAACAGGCGCTCAATCTCGGCTTCGACCGCT
TTCAGGGCTATTACTTCGCGAATCCGCAAGGTGCGGCGGCACGCAAGGTAAGCGCGCCGCGTCATGCGCTGCTGAATCTG
CTGCAACTGCTCGGCGGCGAACCGACTGTCGCGCAGCTCGAAGCCGAACTCAAACTGAACCCGGTGCTCGTGATGCACCT
GATGCGCCTCGCCAATTCGAGCGGCCTCGCGATGGGCCGCAAGGTCACGACCTTGCGCGAAGCGATCAACGCGACGGGCA
CGAACCGCATCGCGCGCTGGACGCAGCTGCTGCTCTACGCGGACGGCCGCAAGGTCGCGCTCGAAGACGATCCGCTGCTG
CAACTCGCCGCAACACGCGCGCGTTTCATGGAGCTGGCCGTCGAACGTCTGCCCGAAGCCGGCCGTGACGAAACCGACGC
GGCTTTTCTCACGGGCGTGTTTTCGTTCGTCGATTCGGTGTTCGGCGGCTCGCTCGAACATACGCTCAATGTGCTCGCGC
TGTCCAAGCCGATCCGCGATGCGATTCTGTTGCGAGAAGGCGCACTCGGCAAGTTGCTCACACTGGTCGAAGCGCTTGAG
CGCGGCGCGTGGTCGGACATCGAAAGCGCGTGCTCGACACTCGACGGCGTGCAGGTGAGCGACATCGCGCAGATGGGCCT
CGTCGCCGCCGCTTGGGCGGGCACCGCCGACCGCAGTGCGGAGGCCACGGGGCTGGAGCGTATCGAGGACTAA

Upstream 100 bases:

>100_bases
AACGATACTGAGAGCACGAAGCGCAACGCTTCGCCACAACTACTTGCACGGGGTCCGGTTCTGCGCGCGAGCGCGTACCC
GGATCGACAGGGGACCGGGA

Downstream 100 bases:

>100_bases
CGCCAGATGCCGCGCGGTTCGACAACCTGAGCCGCGCGGTCGACGGAAGAGGGCGCATGGCGTTCAGCCCGCGCCGGGCA
TCAAAGCGTTTCTAGTTCGC

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MTITAVAERHAEGVPGITQDARANVSFARQSILNRDNMLCAFELKLYQAPVAETREAAEVTDSERPKPGPSAAERFIQAV
LQQDVRAALANHPGYLPVTRELLFDEAIRSLPAERFMLELPPDIVADDTLIARLVELHGRRYRFVIDNVAQADETFARLL
PYADAVKIDMNRIPQAVLPKFASVLKSAGKLLIAQGVESQEVFEQALNLGFDRFQGYYFANPQGAAARKVSAPRHALLNL
LQLLGGEPTVAQLEAELKLNPVLVMHLMRLANSSGLAMGRKVTTLREAINATGTNRIARWTQLLLYADGRKVALEDDPLL
QLAATRARFMELAVERLPEAGRDETDAAFLTGVFSFVDSVFGGSLEHTLNVLALSKPIRDAILLREGALGKLLTLVEALE
RGAWSDIESACSTLDGVQVSDIAQMGLVAAAWAGTADRSAEATGLERIED

Sequences:

>Translated_450_residues
MTITAVAERHAEGVPGITQDARANVSFARQSILNRDNMLCAFELKLYQAPVAETREAAEVTDSERPKPGPSAAERFIQAV
LQQDVRAALANHPGYLPVTRELLFDEAIRSLPAERFMLELPPDIVADDTLIARLVELHGRRYRFVIDNVAQADETFARLL
PYADAVKIDMNRIPQAVLPKFASVLKSAGKLLIAQGVESQEVFEQALNLGFDRFQGYYFANPQGAAARKVSAPRHALLNL
LQLLGGEPTVAQLEAELKLNPVLVMHLMRLANSSGLAMGRKVTTLREAINATGTNRIARWTQLLLYADGRKVALEDDPLL
QLAATRARFMELAVERLPEAGRDETDAAFLTGVFSFVDSVFGGSLEHTLNVLALSKPIRDAILLREGALGKLLTLVEALE
RGAWSDIESACSTLDGVQVSDIAQMGLVAAAWAGTADRSAEATGLERIED
>Mature_449_residues
TITAVAERHAEGVPGITQDARANVSFARQSILNRDNMLCAFELKLYQAPVAETREAAEVTDSERPKPGPSAAERFIQAVL
QQDVRAALANHPGYLPVTRELLFDEAIRSLPAERFMLELPPDIVADDTLIARLVELHGRRYRFVIDNVAQADETFARLLP
YADAVKIDMNRIPQAVLPKFASVLKSAGKLLIAQGVESQEVFEQALNLGFDRFQGYYFANPQGAAARKVSAPRHALLNLL
QLLGGEPTVAQLEAELKLNPVLVMHLMRLANSSGLAMGRKVTTLREAINATGTNRIARWTQLLLYADGRKVALEDDPLLQ
LAATRARFMELAVERLPEAGRDETDAAFLTGVFSFVDSVFGGSLEHTLNVLALSKPIRDAILLREGALGKLLTLVEALER
GAWSDIESACSTLDGVQVSDIAQMGLVAAAWAGTADRSAEATGLERIED

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 49058; Mature: 48927

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITAVAERHAEGVPGITQDARANVSFARQSILNRDNMLCAFELKLYQAPVAETREAAEV
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHHHHHC
TDSERPKPGPSAAERFIQAVLQQDVRAALANHPGYLPVTRELLFDEAIRSLPAERFMLEL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHEEEC
PPDIVADDTLIARLVELHGRRYRFVIDNVAQADETFARLLPYADAVKIDMNRIPQAVLPK
CCCHHCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCHHHEEECHHHCCHHHHHH
FASVLKSAGKLLIAQGVESQEVFEQALNLGFDRFQGYYFANPQGAAARKVSAPRHALLNL
HHHHHHHCCCEEECCCCCHHHHHHHHHHCCHHHHCCEEEECCCCCHHHHCCCHHHHHHHH
LQLLGGEPTVAQLEAELKLNPVLVMHLMRLANSSGLAMGRKVTTLREAINATGTNRIARW
HHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHH
TQLLLYADGRKVALEDDPLLQLAATRARFMELAVERLPEAGRDETDAAFLTGVFSFVDSV
HHHHHEECCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
FGGSLEHTLNVLALSKPIRDAILLREGALGKLLTLVEALERGAWSDIESACSTLDGVQVS
HCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHH
DIAQMGLVAAAWAGTADRSAEATGLERIED
HHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
TITAVAERHAEGVPGITQDARANVSFARQSILNRDNMLCAFELKLYQAPVAETREAAEV
CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHHHHHC
TDSERPKPGPSAAERFIQAVLQQDVRAALANHPGYLPVTRELLFDEAIRSLPAERFMLEL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHEEEC
PPDIVADDTLIARLVELHGRRYRFVIDNVAQADETFARLLPYADAVKIDMNRIPQAVLPK
CCCHHCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCHHHEEECHHHCCHHHHHH
FASVLKSAGKLLIAQGVESQEVFEQALNLGFDRFQGYYFANPQGAAARKVSAPRHALLNL
HHHHHHHCCCEEECCCCCHHHHHHHHHHCCHHHHCCEEEECCCCCHHHHCCCHHHHHHHH
LQLLGGEPTVAQLEAELKLNPVLVMHLMRLANSSGLAMGRKVTTLREAINATGTNRIARW
HHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHH
TQLLLYADGRKVALEDDPLLQLAATRARFMELAVERLPEAGRDETDAAFLTGVFSFVDSV
HHHHHEECCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
FGGSLEHTLNVLALSKPIRDAILLREGALGKLLTLVEALERGAWSDIESACSTLDGVQVS
HCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHH
DIAQMGLVAAAWAGTADRSAEATGLERIED
HHHHHHHHHHHHCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]