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The map label for this gene is yaeJ [H]

Identifier: 186476503

GI number: 186476503

Start: 1988618

End: 1989025

Strand: Reverse

Name: yaeJ [H]

Synonym: Bphy_1745

Alternate gene names: 186476503

Gene position: 1989025-1988618 (Counterclockwise)

Preceding gene: 186476505

Following gene: 186476501

Centisome position: 57.17

GC content: 66.18

Gene sequence:

>408_bases
ATGACTTCACGTTATCCGATCCCGCCGGGCGAAATCGAGCTCACGGCCGTGCGCGCACAGGGCGCGGGCGGGCAGAACGT
CAACAAGGTGTCGAGCGCGATTCATCTGCGCTTCGACGTCCGCGCGTCGTCACTGCCCGACGTGCTGAAGATGCGATTGC
TCGCGATGAGCGACCATCGGATCACGCGCGACGGCATCGTCGTCATCAAGGCGCAAGAATACCGGACCCAGGAGATGAAC
CGCGCGGCGGCGCTGGCGCGGCTCGATGCGCTGATCGACAGCGTCAGCGTGACTCGCAAGGCGCGCGTGGCCACACGGCC
GACGCGTGCGTCGAAAGAACGGCGGCTCGAAAGCAAGGCTAGGCGCAGCGATGTGAAGTCGGGGCGGCAGCGCGTCGACC
ACGACTAG

Upstream 100 bases:

>100_bases
TATCCACTTGAAGCACCGGCGGCCGTGCGAAATCTCACACGCCGTGCATCCGGCACGCCTTACCCGGTTACACTTGCCGT
TCATCGCACGAATCTTCGAC

Downstream 100 bases:

>100_bases
CGCGGCGCATCCGCGGTGCGTCACACGGTGCTTGCGTTGCGCATTTCGGGTAGGAAATCGACGCAAAACACATGCGTCTG
ACCGTTGCGCTCGACGGTCA

Product: peptidyl-tRNA hydrolase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MTSRYPIPPGEIELTAVRAQGAGGQNVNKVSSAIHLRFDVRASSLPDVLKMRLLAMSDHRITRDGIVVIKAQEYRTQEMN
RAAALARLDALIDSVSVTRKARVATRPTRASKERRLESKARRSDVKSGRQRVDHD

Sequences:

>Translated_135_residues
MTSRYPIPPGEIELTAVRAQGAGGQNVNKVSSAIHLRFDVRASSLPDVLKMRLLAMSDHRITRDGIVVIKAQEYRTQEMN
RAAALARLDALIDSVSVTRKARVATRPTRASKERRLESKARRSDVKSGRQRVDHD
>Mature_134_residues
TSRYPIPPGEIELTAVRAQGAGGQNVNKVSSAIHLRFDVRASSLPDVLKMRLLAMSDHRITRDGIVVIKAQEYRTQEMNR
AAALARLDALIDSVSVTRKARVATRPTRASKERRLESKARRSDVKSGRQRVDHD

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=126, Percent_Identity=67.4603174603175, Blast_Score=172, Evalue=5e-45,
Organism=Drosophila melanogaster, GI19921098, Length=133, Percent_Identity=36.8421052631579, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15074; Mature: 14942

Theoretical pI: Translated: 11.71; Mature: 11.71

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRYPIPPGEIELTAVRAQGAGGQNVNKVSSAIHLRFDVRASSLPDVLKMRLLAMSDHR
CCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCCE
ITRDGIVVIKAQEYRTQEMNRAAALARLDALIDSVSVTRKARVATRPTRASKERRLESKA
ECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
RRSDVKSGRQRVDHD
HHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSRYPIPPGEIELTAVRAQGAGGQNVNKVSSAIHLRFDVRASSLPDVLKMRLLAMSDHR
CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCCE
ITRDGIVVIKAQEYRTQEMNRAAALARLDALIDSVSVTRKARVATRPTRASKERRLESKA
ECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
RRSDVKSGRQRVDHD
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635807; 9278503; 7635808 [H]