| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476442
Identifier: 186476442
GI number: 186476442
Start: 1912363
End: 1914234
Strand: Reverse
Name: 186476442
Synonym: Bphy_1684
Alternate gene names: NA
Gene position: 1914234-1912363 (Counterclockwise)
Preceding gene: 186476445
Following gene: 186476441
Centisome position: 55.02
GC content: 56.2
Gene sequence:
>1872_bases ATGCGTCAAGTTATCCGCGATTTCTTTTACACGTCCATCGCTGATAAGCGGGTTAACCTGCCGCTGCCGCCGACCTCGCT CGCGATCGAATCGCGCAAGCTCAATATCCTCCTGCTCGGTACGTGCGGAGTCGACATGCTCGCGAAGCGAAGCGTCGATT GCGGACACAGCATCCGGCACATGCTCATGGGGTCGAAATACCATGATCTTGTGCCGGATGTTGCCCCGACAGACGACGTA GCCGTCGTGAGCCTGACCCTCCGGCACGTTTTGAGCGAAGTCACGCAAACGCCCGAGCCCGTGGTCGACATGGCTTTTTC CCGGCTCCAGTCGGATGAAGAGGCAAGCACGCTGCTGGAGAGAGCGGGAACGTATCTTTCGCAAAAGGTCGCGCAGATTG CCGGGAAGATAACGTCGGTGCCGATTCTGTTCATGTCGTTTTTCGAACCGAGCTTCAATTATGTAGGCGATCTTATCGAC CCGTTCAGTCCGCCGTCCCCGACATACCTGGTTCGTGAAATCAACCGGCTTTTGTCGGACGCTGTGCGGAAAACGAACAA CTGCTACTTTCTCGACTCCAACGAGATATTGAACTTCATCGGCCGCCGGCATTTGCAGGACGATGTCGTGGCGAGCAGTT CACATGCGTCGTTTATCAACGACTGGGATTTCAAACTCGACTCGAACCGGCTGAACGCGCCGAAAGCGCTTGGCAATATT TTCAGGTATGAAGTTGCCTGCCGTGAATTTACGCTCGCGCTTCTGTCGCGCATCGAAACGATGGTCAAGATCGTCGAGCA GCGCAACCCGGTGAAGCTGATCATTGTCGATCTCGACGACACCATGTGGCGGGGCGTTGCTGCGGAAGCCGAGAGCCTGA GTCTGGAACAGCGCATCGAGGGTTGGCCCATCGGCCTCGCGGAAGCCCTGATGTTCTTCAAGAGGCGTGGCGGACTGCTG GCTATCTGCAGCAAGAATGAAGAGGCGCCCACCATCGAACGGTTCAACAGCATCTGGCGAGGCGCGATCACGCTCGATGA TTTTGCTTGTGTCCGCATTAACTGGAAGCCCAAGTCACAGAACATCCTTGAAATCATCAAGGAGGTGAATCTGCTGCCGG GAAACTGCGTGTTCATGGACGATAACGACCGGGAATTGTCGGAGGTAAAGGCCGCGATTCCCGACATGCGCTGTCTTGGC GGCAACCATTACGACTGGCGGCGGATCATCCTGCGCTCGGCGGAAACGCAAGTGCCGTTCGTCACGCAGGAGTCTTCGCG ACGTACCGATCTCGTTCGCGCAATCTCGCAGCGCGAAGCGGGCGCGCATTCCGCAAGTGGGGTGTCGCGCGAAGCATGGC TTGCGTCGTTGCAGCTTCGTCAATCACTTTTCTTGATAAAGACCCCGAAATCCAGACATTTCGATCGCGCCTTCGAGCTG ATCAACAAGACCAATCAATTCAACACAACCGGCAAACGATGGGAGAAGTCGGAGCTCGAGAAATTCATCAGCAAAGGCGG TTACTGTATTGTCTCGTCCCTGCGGGACAAGCTGATCGACAATGGCATCATCTCGGTCTGCCTGGTGAAATGCGAGCGCA TCGTTCAGGTGGTGCTGTCATGCCGCGTTTTTGGGCTCGGCGCAGAACTGGTCGTTGGAGCGATCGCAACACGGTTAGCG CTTAAAGCACGCCCGGAGATCCGTGCCGAGCTGGTCGATACAGGAAAGAACGCGACCTGTCACGACTACTTCAGGCGGAT TGGTTTCTCCGAAACGACGACGGGTTTGTGCTCGAGCAGCGCGAATGAACTGCCGTCCTACATCAAGATCGAGAATCTGG GGGCTGCCGACTTTCCTCCTGTCCAGATTTAG
Upstream 100 bases:
>100_bases CATGCCGCGGCTGATGCTGTCCGTGCGCGCCCACCCGTGCCCTCGCGAGGCGCACAGGTGTCCTTCGCGATGTGGAACGT TTTCATTCTGAGGGCTGAAA
Downstream 100 bases:
>100_bases CGCCGCCAGAGGCGCGGATGCCGCCAGTCGATTCTGTCCCGGCGGACTCAATGGCGCGTTCGATCTCTCTCTCACATCGT CATCAGCAAGGGGATGTGGT
Product: FkbH like protein
Products: NA
Alternate protein names: FkbH Domain-Containing Protein; Modular Polyketide Synthase; FkbH-Like Protein; HAD Family Phosphatase; Amino Acid Adenylation Domain Protein; Phosphatase IIIC; FkbH Domain Protein; Methoxymalonate Biosynthesis Protein; HAD Family Phosphatase FbkH; Non-Ribosomal Peptide Synthetase; Involved In Methoxymalonyl-ACP Biosynthesis; FkbH-Protein; Polyketide Synthase Protein; Polyketide Synthase Subunit; Modular Polyketide Synthase Type I PKS; HAD-Superfamily Phosphatase Subfamily Protein; HAD-Superfamily Protein; Involved In Methoxymalonyl-ACP Biosynthesis-Like; FkbH Domain; Had-Superfamily Phosphatase Subfamily IIIcFkbh-Like Domain; Peptide Synthetase; Had-Superfamily Phosphatase Subfamily IIIc; Methoxymalonyl-ACP Biosynthesis Protein; Methoxymalonate Biosynthesis Protein HbmH
Number of amino acids: Translated: 623; Mature: 623
Protein sequence:
>623_residues MRQVIRDFFYTSIADKRVNLPLPPTSLAIESRKLNILLLGTCGVDMLAKRSVDCGHSIRHMLMGSKYHDLVPDVAPTDDV AVVSLTLRHVLSEVTQTPEPVVDMAFSRLQSDEEASTLLERAGTYLSQKVAQIAGKITSVPILFMSFFEPSFNYVGDLID PFSPPSPTYLVREINRLLSDAVRKTNNCYFLDSNEILNFIGRRHLQDDVVASSSHASFINDWDFKLDSNRLNAPKALGNI FRYEVACREFTLALLSRIETMVKIVEQRNPVKLIIVDLDDTMWRGVAAEAESLSLEQRIEGWPIGLAEALMFFKRRGGLL AICSKNEEAPTIERFNSIWRGAITLDDFACVRINWKPKSQNILEIIKEVNLLPGNCVFMDDNDRELSEVKAAIPDMRCLG GNHYDWRRIILRSAETQVPFVTQESSRRTDLVRAISQREAGAHSASGVSREAWLASLQLRQSLFLIKTPKSRHFDRAFEL INKTNQFNTTGKRWEKSELEKFISKGGYCIVSSLRDKLIDNGIISVCLVKCERIVQVVLSCRVFGLGAELVVGAIATRLA LKARPEIRAELVDTGKNATCHDYFRRIGFSETTTGLCSSSANELPSYIKIENLGAADFPPVQI
Sequences:
>Translated_623_residues MRQVIRDFFYTSIADKRVNLPLPPTSLAIESRKLNILLLGTCGVDMLAKRSVDCGHSIRHMLMGSKYHDLVPDVAPTDDV AVVSLTLRHVLSEVTQTPEPVVDMAFSRLQSDEEASTLLERAGTYLSQKVAQIAGKITSVPILFMSFFEPSFNYVGDLID PFSPPSPTYLVREINRLLSDAVRKTNNCYFLDSNEILNFIGRRHLQDDVVASSSHASFINDWDFKLDSNRLNAPKALGNI FRYEVACREFTLALLSRIETMVKIVEQRNPVKLIIVDLDDTMWRGVAAEAESLSLEQRIEGWPIGLAEALMFFKRRGGLL AICSKNEEAPTIERFNSIWRGAITLDDFACVRINWKPKSQNILEIIKEVNLLPGNCVFMDDNDRELSEVKAAIPDMRCLG GNHYDWRRIILRSAETQVPFVTQESSRRTDLVRAISQREAGAHSASGVSREAWLASLQLRQSLFLIKTPKSRHFDRAFEL INKTNQFNTTGKRWEKSELEKFISKGGYCIVSSLRDKLIDNGIISVCLVKCERIVQVVLSCRVFGLGAELVVGAIATRLA LKARPEIRAELVDTGKNATCHDYFRRIGFSETTTGLCSSSANELPSYIKIENLGAADFPPVQI >Mature_623_residues MRQVIRDFFYTSIADKRVNLPLPPTSLAIESRKLNILLLGTCGVDMLAKRSVDCGHSIRHMLMGSKYHDLVPDVAPTDDV AVVSLTLRHVLSEVTQTPEPVVDMAFSRLQSDEEASTLLERAGTYLSQKVAQIAGKITSVPILFMSFFEPSFNYVGDLID PFSPPSPTYLVREINRLLSDAVRKTNNCYFLDSNEILNFIGRRHLQDDVVASSSHASFINDWDFKLDSNRLNAPKALGNI FRYEVACREFTLALLSRIETMVKIVEQRNPVKLIIVDLDDTMWRGVAAEAESLSLEQRIEGWPIGLAEALMFFKRRGGLL AICSKNEEAPTIERFNSIWRGAITLDDFACVRINWKPKSQNILEIIKEVNLLPGNCVFMDDNDRELSEVKAAIPDMRCLG GNHYDWRRIILRSAETQVPFVTQESSRRTDLVRAISQREAGAHSASGVSREAWLASLQLRQSLFLIKTPKSRHFDRAFEL INKTNQFNTTGKRWEKSELEKFISKGGYCIVSSLRDKLIDNGIISVCLVKCERIVQVVLSCRVFGLGAELVVGAIATRLA LKARPEIRAELVDTGKNATCHDYFRRIGFSETTTGLCSSSANELPSYIKIENLGAADFPPVQI
Specific function: Unknown
COG id: COG3882
COG function: function code Q; Predicted enzyme involved in methoxymalonyl-ACP biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69984; Mature: 69984
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQVIRDFFYTSIADKRVNLPLPPTSLAIESRKLNILLLGTCGVDMLAKRSVDCGHSIRH CHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEEEEECCCHHHHHHCCCCCHHHHHH MLMGSKYHDLVPDVAPTDDVAVVSLTLRHVLSEVTQTPEPVVDMAFSRLQSDEEASTLLE HHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH RAGTYLSQKVAQIAGKITSVPILFMSFFEPSFNYVGDLIDPFSPPSPTYLVREINRLLSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHH AVRKTNNCYFLDSNEILNFIGRRHLQDDVVASSSHASFINDWDFKLDSNRLNAPKALGNI HHHHCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCHHHHHHH FRYEVACREFTLALLSRIETMVKIVEQRNPVKLIIVDLDDTMWRGVAAEAESLSLEQRIE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHC GWPIGLAEALMFFKRRGGLLAICSKNEEAPTIERFNSIWRGAITLDDFACVRINWKPKSQ CCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCEEECCEEEEEEECCCCCC NILEIIKEVNLLPGNCVFMDDNDRELSEVKAAIPDMRCLGGNHYDWRRIILRSAETQVPF HHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHCCCCCCE VTQESSRRTDLVRAISQREAGAHSASGVSREAWLASLQLRQSLFLIKTPKSRHFDRAFEL EECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCHHHHHHHH INKTNQFNTTGKRWEKSELEKFISKGGYCIVSSLRDKLIDNGIISVCLVKCERIVQVVLS HHCCCCCCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH CRVFGLGAELVVGAIATRLALKARPEIRAELVDTGKNATCHDYFRRIGFSETTTGLCSSS HHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHCCC ANELPSYIKIENLGAADFPPVQI HHCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MRQVIRDFFYTSIADKRVNLPLPPTSLAIESRKLNILLLGTCGVDMLAKRSVDCGHSIRH CHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEEEEECCCHHHHHHCCCCCHHHHHH MLMGSKYHDLVPDVAPTDDVAVVSLTLRHVLSEVTQTPEPVVDMAFSRLQSDEEASTLLE HHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH RAGTYLSQKVAQIAGKITSVPILFMSFFEPSFNYVGDLIDPFSPPSPTYLVREINRLLSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHH AVRKTNNCYFLDSNEILNFIGRRHLQDDVVASSSHASFINDWDFKLDSNRLNAPKALGNI HHHHCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCHHHHHHH FRYEVACREFTLALLSRIETMVKIVEQRNPVKLIIVDLDDTMWRGVAAEAESLSLEQRIE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHC GWPIGLAEALMFFKRRGGLLAICSKNEEAPTIERFNSIWRGAITLDDFACVRINWKPKSQ CCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCEEECCEEEEEEECCCCCC NILEIIKEVNLLPGNCVFMDDNDRELSEVKAAIPDMRCLGGNHYDWRRIILRSAETQVPF HHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHCCCCCCE VTQESSRRTDLVRAISQREAGAHSASGVSREAWLASLQLRQSLFLIKTPKSRHFDRAFEL EECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCHHHHHHHH INKTNQFNTTGKRWEKSELEKFISKGGYCIVSSLRDKLIDNGIISVCLVKCERIVQVVLS HHCCCCCCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH CRVFGLGAELVVGAIATRLALKARPEIRAELVDTGKNATCHDYFRRIGFSETTTGLCSSS HHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHCCC ANELPSYIKIENLGAADFPPVQI HHCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA